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Volumn 88, Issue 8, 2014, Pages 4543-4557

Flexibility in surface-exposed loops in a virus capsid mediates escape from antibody neutralization

Author keywords

[No Author keywords available]

Indexed keywords

MONOCLONAL ANTIBODY;

EID: 84896934991     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.03685-13     Document Type: Article
Times cited : (31)

References (46)
  • 2
    • 0034990080 scopus 로고    scopus 로고
    • Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions
    • Schneider WL, Roossinck MJ. 2001. Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions. J. Virol. 75:6566-6571. http://dx.doi.org/10.1128/JVI.75.14.6566-6571.2001.
    • (2001) J. Virol. , vol.75 , pp. 6566-6571
    • Schneider, W.L.1    Roossinck, M.J.2
  • 3
    • 84876406925 scopus 로고    scopus 로고
    • The role of mutational robustness in RNA virus evolution
    • Lauring AS, Frydman J, Andino R. 2013. The role of mutational robustness in RNA virus evolution. Nat. Rev. Microbiol. 11:327-336. http://dx.doi.org/10.1038/nrmicro3003.
    • (2013) Nat. Rev. Microbiol. , vol.11 , pp. 327-336
    • Lauring, A.S.1    Frydman, J.2    Andino, R.3
  • 7
    • 31044432122 scopus 로고    scopus 로고
    • Molecular and epidemiologic trends of caliciviruses associated with outbreaks of acute gastroenteritis in the United States, 2000-2004
    • Blanton LH, Adams SM, Beard RS, Wei G, Bulens SN, Widdowson MA, Glass RI, Monroe SS. 2006. Molecular and epidemiologic trends of caliciviruses associated with outbreaks of acute gastroenteritis in the United States, 2000-2004. J. Infect. Dis. 193:413-421. http://dx.doi.org/10.1086/499315.
    • (2006) J. Infect. Dis. , vol.193 , pp. 413-421
    • Blanton, L.H.1    Adams, S.M.2    Beard, R.S.3    Wei, G.4    Bulens, S.N.5    Widdowson, M.A.6    Glass, R.I.7    Monroe, S.S.8
  • 8
    • 33846078785 scopus 로고    scopus 로고
    • Gastroenteritis caused by norovirus GGII.4, The Netherlands, 1994-2005
    • Siebenga JJ, Vennema H, Duizer E, Koopmans MP. 2007. Gastroenteritis caused by norovirus GGII.4, The Netherlands, 1994-2005. Emerg. Infect. Dis. 13:144-146. http://dx.doi.org/10.3201/eid1301.060800.
    • (2007) Emerg. Infect. Dis. , vol.13 , pp. 144-146
    • Siebenga, J.J.1    Vennema, H.2    Duizer, E.3    Koopmans, M.P.4
  • 12
    • 84874689661 scopus 로고    scopus 로고
    • Emergence of a norovirus GII.4 strain correlates with changes in evolving blockade epitopes
    • Lindesmith LC, Costantini V, Swanstrom J, Debbink K, Donaldson EF, Vinje J, Baric RS. 2013. Emergence of a norovirus GII.4 strain correlates with changes in evolving blockade epitopes. J. Virol. 87:2803-2813. http://dx.doi.org/10.1128/JVI.03106-12.
    • (2013) J. Virol. , vol.87 , pp. 2803-2813
    • Lindesmith, L.C.1    Costantini, V.2    Swanstrom, J.3    Debbink, K.4    Donaldson, E.F.5    Vinje, J.6    Baric, R.S.7
  • 14
    • 34547557616 scopus 로고    scopus 로고
    • Recovery of genetically defined murine norovirus in tissue culture by using a fowlpox virus expressing T7 RNA polymerase
    • Chaudhry Y, Skinner MA, Goodfellow IG. 2007. Recovery of genetically defined murine norovirus in tissue culture by using a fowlpox virus expressing T7 RNA polymerase. J. Gen. Virol. 88:2091-2100. http://dx.doi.org/10.1099/vir.0.82940-0.
    • (2007) J. Gen. Virol. , vol.88 , pp. 2091-2100
    • Chaudhry, Y.1    Skinner, M.A.2    Goodfellow, I.G.3
  • 15
    • 0037423838 scopus 로고    scopus 로고
    • STAT1-dependent innate immunity to a Norwalk-like virus
    • Karst SM, Wobus CE, Lay M, Davidson J, Virgin HW, IV. 2003. STAT1-dependent innate immunity to a Norwalk-like virus. Science 299: 1575-1578. http://dx.doi.org/10.1126/science.1077905.
    • (2003) Science , vol.299 , pp. 1575-1578
    • Karst, S.M.1    Wobus, C.E.2    Lay, M.3    Davidson, J.4    Virgin IV, H.W.5
  • 18
    • 33646718792 scopus 로고    scopus 로고
    • Murine norovirus: a model system to study norovirus biology and pathogenesis
    • Wobus CE, Thackray LB, Virgin HW, IV. 2006. Murine norovirus: a model system to study norovirus biology and pathogenesis. J. Virol. 80: 5104-5112. http://dx.doi.org/10.1128/JVI.02346-05.
    • (2006) J. Virol. , vol.80 , pp. 5104-5112
    • Wobus, C.E.1    Thackray, L.B.2    Virgin IV, H.W.3
  • 19
    • 0033536662 scopus 로고    scopus 로고
    • X-ray crystallographic structure of the Norwalk virus capsid
    • Prasad BV, Hardy ME, Dokland T, Bella J, Rossmann MG, Estes MK. 1999. X-ray crystallographic structure of the Norwalk virus capsid. Science 286:287-290. http://dx.doi.org/10.1126/science.286.5438.287.
    • (1999) Science , vol.286 , pp. 287-290
    • Prasad, B.V.1    Hardy, M.E.2    Dokland, T.3    Bella, J.4    Rossmann, M.G.5    Estes, M.K.6
  • 21
    • 0028321481 scopus 로고
    • Three-dimensional structure of baculovirus-expressed Norwalk virus capsids
    • Prasad BV, Rothnagel R, Jiang X, Estes MK. 1994. Three-dimensional structure of baculovirus-expressed Norwalk virus capsids. J. Virol. 68: 5117-5125.
    • (1994) J. Virol. , vol.68 , pp. 5117-5125
    • Prasad, B.V.1    Rothnagel, R.2    Jiang, X.3    Estes, M.K.4
  • 22
    • 39749202900 scopus 로고    scopus 로고
    • Structure of antibody-neutralized murine norovirus and unexpected differences from viruslike particles
    • Katpally U, Wobus CE, Dryden K, Virgin HW, IV, Smith TJ. 2008. Structure of antibody-neutralized murine norovirus and unexpected differences from viruslike particles. J. Virol. 82:2079-2088. http://dx.doi.org/10.1128/JVI.02200-07.
    • (2008) J. Virol. , vol.82 , pp. 2079-2088
    • Katpally, U.1    Wobus, C.E.2    Dryden, K.3    Virgin IV, H.W.4    Smith, T.J.5
  • 23
    • 48249142845 scopus 로고    scopus 로고
    • Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus
    • Choi JM, Hutson AM, Estes MK, Prasad BV. 2008. Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus. Proc. Natl. Acad. Sci. U. S. A. 105:9175-9180. http://dx.doi.org/10.1073/pnas.0803275105.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 9175-9180
    • Choi, J.M.1    Hutson, A.M.2    Estes, M.K.3    Prasad, B.V.4
  • 24
    • 2642552973 scopus 로고    scopus 로고
    • The P domain of norovirus capsid protein forms dimer and binds to histo-blood group antigen receptors
    • Tan M, Hegde RS, Jiang X. 2004. The P domain of norovirus capsid protein forms dimer and binds to histo-blood group antigen receptors. J. Virol. 78: 6233-6242. http://dx.doi.org/10.1128/JVI.78.12.6233-6242.2004.
    • (2004) J. Virol. , vol.78 , pp. 6233-6242
    • Tan, M.1    Hegde, R.S.2    Jiang, X.3
  • 25
    • 76949106028 scopus 로고    scopus 로고
    • Viral shapeshifting: norovirus evasion of the human immune system
    • Donaldson EF, Lindesmith LC, Lobue AD, Baric RS. 2010. Viral shapeshifting: norovirus evasion of the human immune system. Nat. Rev. Microbiol. 8:231-241. http://dx.doi.org/10.1038/nrmicro2296.
    • (2010) Nat. Rev. Microbiol. , vol.8 , pp. 231-241
    • Donaldson, E.F.1    Lindesmith, L.C.2    Lobue, A.D.3    Baric, R.S.4
  • 26
    • 0345167058 scopus 로고    scopus 로고
    • Evolution of human calicivirus RNA in vivo: accumulation of mutations in the protruding P2 domain of the capsid leads to structural changes and possibly a new phenotype
    • Nilsson M, Hedlund KO, Thorhagen M, Larson G, Johansen K, Ekspong A, Svensson L. 2003. Evolution of human calicivirus RNA in vivo: accumulation of mutations in the protruding P2 domain of the capsid leads to structural changes and possibly a new phenotype. J. Virol. 77: 13117-13124. http://dx.doi.org/10.1128/JVI.77.24.13117-13124.2003.
    • (2003) J. Virol. , vol.77 , pp. 13117-13124
    • Nilsson, M.1    Hedlund, K.O.2    Thorhagen, M.3    Larson, G.4    Johansen, K.5    Ekspong, A.6    Svensson, L.7
  • 27
    • 77951986493 scopus 로고    scopus 로고
    • High-resolution X-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain
    • Taube S, Rubin JR, Katpally U, Smith TJ, Kendall A, Stuckey JA, Wobus CE. 2010. High-resolution X-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain. J. Virol. 84:5695-5705. http://dx.doi.org/10.1128/JVI.00316-10.
    • (2010) J. Virol. , vol.84 , pp. 5695-5705
    • Taube, S.1    Rubin, J.R.2    Katpally, U.3    Smith, T.J.4    Kendall, A.5    Stuckey, J.A.6    Wobus, C.E.7
  • 28
    • 34648824648 scopus 로고    scopus 로고
    • Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence
    • Thackray LB, Wobus CE, Chachu KA, Liu B, Alegre ER, Henderson KS, Kelley ST, Virgin HW, IV. 2007. Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence. J. Virol. 81:10460-10473. http://dx.doi.org/10.1128/JVI.00783-07.
    • (2007) J. Virol. , vol.81 , pp. 10460-10473
    • Thackray, L.B.1    Wobus, C.E.2    Chachu, K.A.3    Liu, B.4    Alegre, E.R.5    Henderson, K.S.6    Kelley, S.T.7    Virgin IV, H.W.8
  • 30
    • 36048986725 scopus 로고    scopus 로고
    • A single-amino-acid substitution in the P2 domain of VP1 of murine norovirus is sufficient for escape from antibody neutralization
    • Lochridge VP, Hardy ME. 2007. A single-amino-acid substitution in the P2 domain of VP1 of murine norovirus is sufficient for escape from antibody neutralization. J. Virol. 81:12316-12322. http://dx.doi.org/10.1128/JVI.01254-07.
    • (2007) J. Virol. , vol.81 , pp. 12316-12322
    • Lochridge, V.P.1    Hardy, M.E.2
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 32
    • 77956190704 scopus 로고    scopus 로고
    • Development of an optimized RNA-based murine norovirus reverse ge-netics system
    • Yunus MA, Chung LM, Chaudhry Y, Bailey D, Goodfellow I. 2010. Development of an optimized RNA-based murine norovirus reverse ge-netics system. J. Virol. Methods 169:112-118. http://dx.doi.org/10.1016/j.jviromet.2010.07.006.
    • (2010) J. Virol. Methods , vol.169 , pp. 112-118
    • Yunus, M.A.1    Chung, L.M.2    Chaudhry, Y.3    Bailey, D.4    Goodfellow, I.5
  • 33
    • 0344683235 scopus 로고    scopus 로고
    • National Research Council, 8th ed. National Academies Press, Washington, DC.
    • National Research Council. 2011. Guide for the care and use of laboratory animals, 8th ed. National Academies Press, Washington, DC.
    • (2011) Guide for the care and use of laboratory animals
  • 34
    • 84896983719 scopus 로고    scopus 로고
    • Quantitative production of monoclonal antibodies
    • Howard GC, Kaser MR (ed), 2nd ed. CRC Press, Boca Raton, FL.
    • Fox DA, Smith E. 2013. Quantitative production of monoclonal antibodies. In Howard GC, Kaser MR (ed), Making and using antibodies: a practical handbook, 2nd ed. CRC Press, Boca Raton, FL.
    • (2013) Making and using antibodies: a practical handbook
    • Fox, D.A.1    Smith, E.2
  • 35
    • 0028103275 scopus 로고
    • The CCP4 suite: programs for protein crystallography
    • Bailey S. 1994. The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D Biol. Crystllogr. 50:760-763.
    • (1994) Acta Crystallogr. D Biol. Crystllogr. , vol.50 , pp. 760-763
    • Bailey, S.1
  • 36
    • 0035017308 scopus 로고    scopus 로고
    • Caveolar endocytosis of simian virus 40 reveals a new two-step vesicular-transport pathway to the ER
    • Pelkmans L, Kartenbeck J, Helenius A. 2001. Caveolar endocytosis of simian virus 40 reveals a new two-step vesicular-transport pathway to the ER. Nat. Cell Biol. 3:473-483. http://dx.doi.org/10.1038/35074539.
    • (2001) Nat. Cell Biol. , vol.3 , pp. 473-483
    • Pelkmans, L.1    Kartenbeck, J.2    Helenius, A.3
  • 37
    • 13244281317 scopus 로고    scopus 로고
    • Coot: model-building tools for molecular graphics
    • Emsley P, Cowtan K. 2004. Coot: model-building tools for molecular graphics. Acta Crystallogr. D Biol. Crystallogr. 60:2126-2132. http://dx.doi.org/10.1107/S0907444904019158.
    • (2004) Acta Crystallogr. D Biol. Crystallogr. , vol.60 , pp. 2126-2132
    • Emsley, P.1    Cowtan, K.2
  • 38
    • 0035783171 scopus 로고    scopus 로고
    • Bsoft: image and molecular processing in electron microscopy
    • Heymann JB. 2001. Bsoft: image and molecular processing in electron microscopy. J. Struct. Biol. 133:156-169. http://dx.doi.org/10.1006/jsbi.2001.4339.
    • (2001) J. Struct. Biol. , vol.133 , pp. 156-169
    • Heymann, J.B.1
  • 40
    • 47749091718 scopus 로고    scopus 로고
    • A single amino acid substitution in the murine norovirus capsid protein is sufficient for attenuation in vivo
    • Bailey D, Thackray LB, Goodfellow IG. 2008. A single amino acid substitution in the murine norovirus capsid protein is sufficient for attenuation in vivo. J. Virol. 82:7725-7728. http://dx.doi.org/10.1128/JVI.00237-08.
    • (2008) J. Virol. , vol.82 , pp. 7725-7728
    • Bailey, D.1    Thackray, L.B.2    Goodfellow, I.G.3
  • 41
    • 84855670786 scopus 로고    scopus 로고
    • Structural studies on antibody recognition and neutralization of viruses
    • Smith TJ. 2011. Structural studies on antibody recognition and neutralization of viruses. Curr. Opin. Virol. 1:150-156. http://dx.doi.org/10.1016/j.coviro.2011.05.020.
    • (2011) Curr. Opin. Virol. , vol.1 , pp. 150-156
    • Smith, T.J.1
  • 42
    • 7444256675 scopus 로고    scopus 로고
    • The evolutionary and structural 'logic' of antigen receptor diversity
    • Davis MM. 2004. The evolutionary and structural 'logic' of antigen receptor diversity. Semin. Immunol. 16:239-243. http://dx.doi.org/10.1016/j.smim.2004.08.003.
    • (2004) Semin. Immunol. , vol.16 , pp. 239-243
    • Davis, M.M.1
  • 43
    • 77955358961 scopus 로고    scopus 로고
    • Using Situs for the integration of multi-resolution structures
    • Wriggers W. 2010. Using Situs for the integration of multi-resolution structures. Biophys. Rev. 2:21-27. http://dx.doi.org/10.1007/s12551-009-0026-3.
    • (2010) Biophys. Rev. , vol.2 , pp. 21-27
    • Wriggers, W.1
  • 44
    • 84874077398 scopus 로고    scopus 로고
    • Norovirus virus-like particle vaccines for the prevention of acute gastroenteritis
    • Richardson C, Bargatze RF, Goodwin R, Mendelman PM. 2013. Norovirus virus-like particle vaccines for the prevention of acute gastroenteritis. Expert Rev. Vaccines 12:155-167. http://dx.doi.org/10.1586/erv.12.145.
    • (2013) Expert Rev. Vaccines , vol.12 , pp. 155-167
    • Richardson, C.1    Bargatze, R.F.2    Goodwin, R.3    Mendelman, P.M.4
  • 45
    • 0029743275 scopus 로고    scopus 로고
    • Neutralizing antibody to human rhinovirus 14 penetrates the receptor-binding canyon
    • Smith TJ, Chase ES, Schmidt TJ, Olson NH, Baker TS. 1996. Neutralizing antibody to human rhinovirus 14 penetrates the receptor-binding canyon. Nature 383:350-354. http://dx.doi.org/10.1038/383350a0.
    • (1996) Nature , vol.383 , pp. 350-354
    • Smith, T.J.1    Chase, E.S.2    Schmidt, T.J.3    Olson, N.H.4    Baker, T.S.5
  • 46
    • 84883261053 scopus 로고    scopus 로고
    • Development of Norwalk virus-specific monoclonal antibodies with therapeutic potential for the treatment of Norwalk virus gastroenteritis
    • Chen Z, Sosnovtsev SV, Bok K, Parra GI, Makiya M, Agulto L, Green KY, Purcell RH. 2013. Development of Norwalk virus-specific monoclonal antibodies with therapeutic potential for the treatment of Norwalk virus gastroenteritis. J. Virol. 87:9547-9557. http://dx.doi.org/10.1128/JVI.01376-13.
    • (2013) J. Virol. , vol.87 , pp. 9547-9557
    • Chen, Z.1    Sosnovtsev, S.V.2    Bok, K.3    Parra, G.I.4    Makiya, M.5    Agulto, L.6    Green, K.Y.7    Purcell, R.H.8


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