Prevalence of Vibrio cholerae O1 El Tor variant in a cholera-endemic zone of Kenya

Journal of Medical Microbiology

Volumn 63, Issue PART 3, 2014, Pages 415-420

  Saidi, Suleiman M ^a,b   Chowdhury, Nityananda ^a,d   Awasthi, Sharda P ^a   Asakura, Masahiro ^a   Hinenoya, Atsushi ^a   Iijima, Yoshio ^c   Yamasaki, Shinji ^a  

^a Osaka City University   (Japan)

^b TECHNICAL UNIVERSITY OF MOMBASA   (Kenya)

^c KOBE INSTITUTE OF HEALTH   (Japan)

^d UNIVERSITY OF DELAWARE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; CEFOTAXIME; CHLORAMPHENICOL; CIPROFLOXACIN; COTRIMOXAZOLE; FOSFOMYCIN; IMIPENEM; KANAMYCIN; NALIDIXIC ACID; NORFLOXACIN; STREPTOMYCIN; TETRACYCLINE;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; CHOLERA; CLONAL VARIATION; CLONE; CONTROLLED STUDY; FECES; GENE SEQUENCE; GENOTYPE; HUMAN; KENYA; MAJOR CLINICAL STUDY; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PREVALENCE; PRIORITY JOURNAL; SEROTYPING; SPECIES ENDEMICITY; VIBRIO CHOLERAE;

ANTI-BACTERIAL AGENTS; BACTERIAL TYPING TECHNIQUES; BASE SEQUENCE; CHOLERA; CHOLERA TOXIN; DIARRHEA; DISEASE OUTBREAKS; DNA, BACTERIAL; DRUG RESISTANCE, MULTIPLE, BACTERIAL; ENDEMIC DISEASES; FECES; GENES, BACTERIAL; GENOTYPE; HUMANS; KENYA; MICROBIAL SENSITIVITY TESTS; MOLECULAR SEQUENCE DATA; MULTIPLEX POLYMERASE CHAIN REACTION; PREVALENCE; SEQUENCE ANALYSIS, DNA; VIBRIO CHOLERAE O1;

EID: 84896739632     PISSN: 00222615     EISSN: None     Source Type: Journal    
DOI: 10.1099/jmm.0.068999-0     Document Type: Article

References (51)

1. Ansaruzzaman, M., Bhuiyan, N. A., Nair, B. G., Sack, D. A., Lucas, M., Deen, J. L., Ampuero, J., Chaignat, C. L. & Mozambique Cholera vaccine Demonstration Project Coordination Group (2004). Cholera in Mozambique, variant of Vibrio cholerae. Emerg Infect Dis 10, 2057-2059.
2. Awasthi, S. P., Asakura, M., Chowdhury, N., Neogi, S. B., Hinenoya, A., Golbar, H. M., Yamate, J., Arakawa, E., Tada, T. & other authors (2013). Novel cholix toxin variants, ADP-ribosylating toxins in Vibrio cholerae non-O1/non-O139 strains, and their pathogenicity. Infect Immun 81, 531-541.
3. Bauer, A. W., Kirby, W. M., Sherris, J. C. & Turck, M. (1966). Antibiotic susceptibility testing by a standardized single disk method. Am J Clin Pathol 45, 493-496.
4. Bentivoglio, M. & Pacini, P. (1995). Filippo Pacini: a determined observer. Brain Res Bull 38, 161-165.
5. Bik, E. M., Gouw, R. D. & Mooi, F. R. (1996). DNA fingerprinting of Vibrio cholerae strains with a novel insertion sequence element: a tool to identify epidemic strains. J Clin Microbiol 34, 1453-1461.
6. Ceccarelli, D., Spagnoletti, M., Bacciu, D., Cappuccinelli, P. & Colombo, M. M. (2011). New V. cholerae atypical El Tor variant emerged during the 2006 epidemic outbreak in Angola. BMC Microbiol 11, 130-137.
7. CLSI (2011). Performance Standards for Antimicrobial Susceptibility Testing; 21st Informational Supplement. Wayne, PA: Clinical and Laboratory Standards Institute.
8. de Magny, G. C., Thiaw, W., Kumar, V., Manga, N. M., Diop, B. M., Gueye, L., Kamara, M., Roche, B., Murtugudde, R. & Colwell, R. R. (2012). Cholera outbreak in Senegal in 2005: was climate a factor? PLoS ONE 7, e44577.
9. Dutta, D., Chowdhury, G., Pazhani, G. P., Guin, S., Dutta, S., Ghosh, S., Rajendran, K., Nandy, R. K., Mukhopadhyay, A. K. & other authors (2013). Vibrio cholerae non-O1, non-O139 serogroups and cholera-like diarrhea, Kolkata, India. Emerg Infect Dis 19, 464-467.
10. Emch, M., Feldacker, C., Islam, M. S. & Ali, M. (2008). Seasonality of cholera from 1974 to 2005: a review of global patterns. Int J Health Geogr 7, 31.
11. Faruque, S. M., Chowdhury, N., Kamruzzaman, M., Ahmad, Q. S., Faruque, A. S. G., Salam, M. A., Ramamurthy, T., Nair, G. B., Weintraub, A. & Sack, D. A. (2003). Reemergence of epidemic Vibrio cholerae O139, Bangladesh. Emerg Infect Dis 9, 1116-1122.
12. Gaffga, N. H., Tauxe, R. V. & Mintz, E. D. (2007). Cholera: a new homeland in Africa? Am J Trop Med Hyg 77, 705-713.
13. Ghosh-Banerjee, J., Senoh, M., Takahashi, T., Hamabata, T., Barman, S., Koley, H., Mukhopadhyay, A. K., Ramamurthy, T., Chatterjee, S. & other authors (2010). Cholera toxin production by the El Tor variant of Vibrio cholerae O1 compared to prototype El Tor and classical biotypes. J Clin Microbiol 48, 4283-4286.
14. Griffith, D. C., Kelly-Hope, L. A. & Miller, M. A. (2006). Review of reported cholera outbreaks worldwide, 1995-2005. Am J Trop Med Hyg 75, 973-977.
15. Hatch, D. L., Waldman, R. J., Lungu, G. W. & Piri, C. (1994). Epidemic cholera during refugee resettlement in Malawi. Int J Epidemiol 23, 1292-1299.
16. Hoshino, K., Yamasaki, S., Mukhopadhyay, A. K., Chakraborty, S., Basu, A., Bhattacharya, S. K., Nair, G. B., Shimada, T. & Takeda, Y. (1998). Development and evaluation of a multiplex PCR assay for rapid detection of toxigenic Vibrio cholerae O1 and O139. FEMS Immunol Med Microbiol 20, 201-207.
17. Iijima, Y., Oundo, J. O., Taga, K., Saidi, S. M. & Honda, T. (1995). Simultaneous outbreak due to Vibrio cholerae and Shigella dysenteriae in Kenya. Lancet 345, 69-70.
18. Islam, M. S., Mahmud, Z. H., Ansaruzzaman, M., Faruque, S. M., Talukder, K. A., Qadri, F., Alam, M., Islam, S., Bardhan, P. K. & other authors (2011). Phenotypic, genotypic, and antibiotic sensitivity patterns of strains isolated from the cholera epidemic in Zimbabwe. J Clin Microbiol 49, 2325-2327.
19. Ismail, H., Smith, A. M., Archer, B. N., Tau, N. P., Sooka, A., Thomas, J., Prinsloo, B., Keddy, K. H. & Group for Enteric, Respiratory and Meningeal Disease Surveillance in South Africa (GERMS-SA) (2012). Case of imported Vibrio cholerae O1 from India to South Africa. J Infect Dev Ctries 6, 897-900.
20. Kaper, J. B., Morris, J. G., Jr & Levine, M. M. (1995). Cholera. Clin Microbiol Rev 8, 48-86.
21. Kiiru, J. N., Saidi, S. M., Goddeeris, B. M., Wamae, N. C., Butaye, P. & Kariuki, S. M. (2009). Molecular characterisation of Vibrio cholerae O1 strains carrying an SXT/R391-like element from cholera outbreaks in Kenya: 1994-2007. BMC Microbiol 9, 275-282.
22. Kiiru, J., Mutreja, A., Mohamed, A. A., Kimani, R. W., Mwituria, J., Sanaya, R. O., Muyodi, J., Revathi, G., Parkhill, J. & other authors (2013). A study on the geophylogeny of clinical and environmental Vibrio cholerae in Kenya. PLoS ONE 8, e74829.
23. Kim, H. B., Wang, M., Ahmed, S., Park, C. H., LaRocque, R. C., Faruque, A. S. G., Salam, M. A., Khan, W. A., Qadri, F. & other authors (2010). Transferable quinolone resistance in Vibrio cholerae. Antimicrob Agents Chemother 54, 799-803.
24. Kumar, P., Jain, M., Goel, A. K., Kamboj, D. V. & Kumar, O. (2012). Tetracycline resistant V. cholerae O1 biotype El Tor serotype Ogawa with classical ctxB from a recent cholera outbreak in Orissa, Eastern India. J Infect Public Health 5, 217-219.
25. Marin, M. A., Thompson, C. C., Freitas, F. S., Fonseca, E. L., Aboderin, A. O., Zailani, S. B., Quartey, N. K. E., Okeke, I. N. & Vicente, A. C. P. (2013). Cholera outbreaks in Nigeria are associated with multidrug resistant atypical El Tor and non-O1/non-O139 Vibrio cholerae. PLoS Negl Trop Dis 7, e2049.
26. Mohamed, A. A., Oundo, J., Kariuki, S. M., Boga, H. I., Sharif, S. K., Akhwale, W., Omolo, J., Amwayi, A. S., Mutonga, D. & other authors (2012). Molecular epidemiology of geographically dispersed Vibrio cholerae, Kenya, January 2009-May 2010. Emerg Infect Dis 18, 925-931.
27. Morita, M., Ohnishi, M., Arakawa, E., Bhuiyan, N. A., Nusrin, S., Alam, M., Siddique, A. K., Qadri, F., Izumiya, H. & other authors (2008). Development and validation of a mismatch amplification mutation PCR assay to monitor the dissemination of an emerging variant of Vibrio cholerae O1 biotype El Tor. Microbiol Immunol 52, 314-317.
28. Mugoya, I., Kariuki, S., Galgalo, T., Njuguna, C., Omollo, J., Njoroge, J., Kalani, R., Nzioka, C., Tetteh, C. & other authors (2008). Rapid spread of Vibrio cholerae O1 throughout Kenya, 2005. Am J Trop Med Hyg 78, 527-533.
29. Mukhopadhyay, A. K., Garg, S., Nair, G. B., Kar, S., Ghosh, R. K., Pajni, S., Ghosh, A., Shimada, T., Takeda, T. & Takeda, Y. (1995). Biotype traits and antibiotic susceptibility of Vibrio cholerae serogroup O1 before, during and after the emergence of the O139 serogroup. Epidemiol Infect 115, 427-434.
30. Mutreja, A., Kim, D. W., Thomson, N. R., Connor, T. R., Lee, J. H., Kariuki, S., Croucher, N. J., Choi, S. Y., Harris, S. R. & other authors (2011). Evidence for several waves of global transmission in the seventh cholera pandemic. Nature 477, 462-465.
31. Naha, A., Chowdhury, G., Ghosh-Banerjee, J., Senoh, M., Takahashi, T., Ley, B., Thriemer, K., Deen, J., Seidlein, L. V. & other authors (2013). Molecular characterization of high-level-cholera-toxin-producing El Tor variant Vibrio cholerae strains in the Zanzibar Archipelago of Tanzania. J Clin Microbiol 51, 1040-1045.
32. Nair, G. B., Faruque, S. M., Bhuiyan, N. A., Kamruzzaman, M., Siddique, A. K. & Sack, D. A. (2002). New variants of Vibrio cholerae O1 biotype El Tor with attributes of the classical biotype from hospitalized patients with acute diarrhea in Bangladesh. J Clin Microbiol 40, 3296-3299.
33. Neogi, S. B., Chowdhury, N., Asakura, M., Hinenoya, A., Haldar, S., Saidi, S. M., Kogure, K., Lara, R. J. & Yamasaki, S. (2010). A highly sensitive and specific multiplex PCR assay for simultaneous detection of Vibrio cholerae, Vibrio parahaemolyticus and Vibrio vulnificus. Lett Appl Microbiol 51, 293-300.
34. Okada, K., Chantaroj, S., Roobthaisong, A., Hamada, S. & Sawanpanyalert, P. (2010). A cholera outbreak of the Vibrio cholerae O1 El Tor variant carrying classical CtxB in northeastern Thailand in 2007. Am J Trop Med Hyg 82, 875-878.
35. Quilici, M. L., Massenet, D., Gake, B., Bwalki, B. & Olson, D. M. (2010). Vibrio cholerae O1 variant with reduced susceptibility to ciprofloxacin, Western Africa. Emerg Infect Dis 16, 1804-1805.
36. Saidi, S. M., Iijima, Y., Sang, W. K., Mwangudza, A. K., Oundo, J. O., Taga, K., Aihara, M., Nagayama, K., Yamamoto, H. & other authors (1997). Epidemiological study on infectious diarrheal diseases in children in a coastal rural area of Kenya. Microbiol Immunol 41, 773-778.
37. Sakazaki, R. & Shimada, T. (1986). Vibrio species as causative agents of foodborne infection. In Developments in Food Microbiology, pp. 125-151. Edited by R. K. Robinson. Elsevier Applied Science.
38. Scrascia, M., Maimone, F., Mohamud, K. A., Materu, S. F., Grimont, F., Grimont, P. A. D. & Pazzani, C. (2006). Clonal relationship among Vibrio cholerae O1 El Tor strains causing the largest cholera epidemic in Kenya in the late 1990s. J Clin Microbiol 44, 3401-3404.
39. Shapiro, R. L., Otieno, M. R., Adcock, P. M., Phillips-Howard, P. A., Hawley, W. A., Kumar, L., Waiyaki, P., Nahlen, B. L. & Slutsker, L. (1999). Transmission of epidemic Vibrio cholerae O1 in rural western Kenya associated with drinking water from Lake Victoria: an environmental reservoir for cholera? Am J Trop Med Hyg 60, 271-276.
40. Shikanga, O. T., Mutonga, D., Abade, M., Amwayi, S., Ope, M., Limo, H., Mintz, E. D., Quick, R. E., Breiman, R. F. & Feikin, D. R. (2009). High mortality in a cholera outbreak in western Kenya after post-election violence in 2008. Am J Trop Med Hyg 81, 1085-1090.
41. Shultz, A., Omollo, J. O., Burke, H., Qassim, M., Ochieng, J. B., Weinberg, M., Feikin, D. R. & Breiman, R. F. (2009). Cholera outbreak in Kenyan refugee camp: risk factors for illness and importance of sanitation. Am J Trop Med Hyg 80, 640-645.
42. Taneja, N., Mishra, A., Sangar, G., Singh, G. & Sharma, M. (2009). Outbreaks caused by new variants of Vibrio cholerae O1 El Tor, India. Emerg Infect Dis 15, 352-354.
43. Teh, C. S. J., Suhaili, Z., Lim, K. T., Khamaruddin, M. A., Yahya, F., Sajili, M. H., Yeo, C. C. & Thong, K. L. (2012). Outbreak-associated Vibrio cholerae genotypes with identical pulsotypes, Malaysia, 2009. Emerg Infect Dis 18, 1177-1179.
44. Tran, H. D., Alam, M., Trung, N. V., Kinh, N. V., Nguyen, H. H., Pham, V. C., Ansaruzzaman, M., Rashed, S. M., Bhuiyan, N. A. & other authors (2012). Multi-drug resistant Vibrio cholerae O1 variant El Tor isolated in northern Vietnam between 2007 and 2010. J Med Microbiol 61, 431-437.
45. WHO (1969). Outbreak of gastroenteritis by nonagglutinable (NAG) vibrios. Wkly Epidemiol Rec 44, 1-28.
46. WHO (2003). Manual for the Laboratory Identification and Antimicrobial Susceptibility Testing of Bacterial Pathogens of Public Health Concern in the Developing World, pp. 141-159. Geneva: WHO.
47. WHO (2006). Cholera 2005. Wkly Epidemiol Rec 81, 297-307.
48. WHO (2008). Cholera, 2007. Wkly Epidemiol Rec 83, 269-283.
49. WHO (2009). Cholera: global surveillance summary, 2008. Wkly Epidemiol Rec 84, 309-324.
50. WHO (2010). Global Task Force on Cholera Control: Cholera Country Profile: Kenya. WHO, Geneva, Switzerland. http://www.who.int/cholera/countries/KenyaCountryProfile2010.pdf
51. Yamasaki, S., Nair, G. B., Bhattacharya, S. K., Yamamoto, S., Kurazono, H. & Takeda, Y. (1997). Cryptic appearance of a new clone of Vibrio cholerae serogroup 01 biotype El Tor in Calcutta, India. Microbiol Immunol 41, 1-6.