Phylogeny of an Albugo sp. infecting Barbarea vulgaris in Denmark and its frequency of symptom development in natural populations of two evolutionary divergent plant types

Fungal Biology

Volumn 118, Issue 3, 2014, Pages 340-347

  van Mölken, Tamara ^a   Heimes, Christine ^a   Hauser, Thure P ^a   Sundelin, Thomas ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Asymptomatic infections; Incidence; Natural plant populations; Oomycete; White blister rust

Indexed keywords

DISEASE INCIDENCE; DNA; GENERALIST; PATHOGEN; PHYLOGENY; PLANT; RELATEDNESS; RUST DISEASE; SYMPTOM;

DENMARK;

ALBUGINACEAE; ALBUGO; ALBUGO CANDIDA; BARBAREA; BARBAREA VULGARIS; BRASSICACEAE; CANDIDA; OOMYCETES;

FUNGAL DNA;

ARTICLE; ASYMPTOMATIC INFECTION; BARBAREA; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; DENMARK; DNA SEQUENCE; GENETICS; INCIDENCE; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NATURAL PLANT POPULATIONS; NUCLEOTIDE SEQUENCE; OOMYCETES; PHYLOGENY; PLANT DISEASE; WHITE BLISTER RUST;

ASYMPTOMATIC INFECTIONS; INCIDENCE; NATURAL PLANT POPULATIONS; OOMYCETE; WHITE BLISTER RUST;

BARBAREA; CLUSTER ANALYSIS; DENMARK; DNA, FUNGAL; MOLECULAR SEQUENCE DATA; OOMYCETES; PHYLOGENY; PLANT DISEASES; SEQUENCE ANALYSIS, DNA;

EID: 84896707637     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2014.01.008     Document Type: Article

References (27)

1. Agerbirk N., Ørgaard M., Nielsen J.K. Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae). Phytochemistry 2003, 63:69-80.
2. Choi Y.-J., Shin H.-D., Ploch S., Thines M. Evidence for uncharted biodiversity in the Albugo candida complex, with the description of a new species. Mycological Research 2008, 112:1327-1334.
3. Choi Y.-J., Hong S.-B., Shin H.-D. Genetic diversity within the Albugo candida complex (Peronosporales, Oomycota) inferred from phylogenetic analysis of ITS rDNA and COX2 mtDNA sequences. Molecular Phylogenetics and Evolution 2006, 40:400-409.
4. Choi D., Priest M.J. A key to the genus Albugo. Mycotaxon 1995, 53:261-272.
5. Choi Y.-J., Shin H.-D., Hong S.-B., Thines M. Morphological and molecular discrimination among Albugo candida materials infecting Capsella bursa-pastoris world-wide. Fungal Diversity 2007, 27:11-34.
6. Choi Y.-J., Shin H.-D., Ploch S., Thines M. Three new phylogenetic lineages are the closest relatives of the widespread species Albugo candida. Fungal Biology 2011, 115:598-607.
7. Choi Y.-J., Thines M. Morphological and molecular confirmation of Albugo resedae (Albuginales; Oomycota) as a distinct species from A. candida. Mycological Progress 2011, 10:143-148.
8. Dalby-Brown L., Olsen C.E., Nielsen J.K., Agerbirk N. Polymorphism for novel tetraglycosylated flavonols in an eco-model crucifer, Barbarea vulgaris. Journal of Agricultural and Food Chemistry 2011, 59:6947-6956.
9. Dangl J.L., Holub E.B., Debener T., Lehnackers H., Ritter C., Crute I.R. Genetic definition of Arabidopsis loci involved in plant-pathogen interactions. Methods in Arabidopsis Research 1992, 393-418. World Scientific Publishing Co., Singapore. C. Koncz, N.H. Chua, J. Schell (Eds.).
10. Hauser T.P., Toneatto F., Nielsen J.K. Genetic and geographic structure of an insect resistant and a susceptible type of Barbarea vulgaris in western Europe. Evolutionary Ecology 2012, 26:611-624.
11. Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
12. Jacobson D.J., LeFebvre S.M., Ojerio R.S., Berwald N., Heikkinen E. Persistent, systemic, asymptomatic infections of Albugo candida, an oomycete parasite, detected in three wild crucifer species. Canadian Journal of Botany 1998, 76:739-750.
13. Kuzina V., Ekstrom C.T., Andersen S.B., Nielsen J.K., Olsen C.E., Bak S. Identification of defense compounds in Barbarea vulgaris against the herbivore Phyllotreta nemorum by an ecometabolomic approach. Plant Physiology 2009, 151:1977-1990.
14. Kole C., Williams P.H., Rimmer S.R., Osborn T.C. Linkage mapping of genes controlling resistance to white rust (Albugo candida) in Brassica rapa (syn. campestris) and comparative mapping to Brassica napus and Arabidopsis thaliana. Genome 2002, 45:22-27.
15. Nielsen J.K. Genetics of the ability of Phyllotreta nemorum to survive in an atypical host plant Barbarea vulgaris ssp. arcuata. Entomologia Experimentalis et Applicata 1997, 82:37-44.
16. Nielsen J., Nagao T., Okabe H., Shinoda T. Resistance in the plant, Barbarea vulgaris, and counter-adaptations in flea beetles mediated by saponins. Journal of Chemical Ecology 2010, 36:277-285.
17. Ploch S., Choi Y.-J., Rost C., Shin H.-D., Schilling E., Thines M. Evolution of diversity in Albugo is driven by high host specificity and multiple speciation events on closely related Brassicaceae. Molecular Phylogenetics and Evolution 2010, 57:812-820.
18. Ploch S., Thines M. Obligate biotrophic pathogens of the genus Albugo are widespread as asymptomatic endophytes in natural populations of Brassicaceae. Molecular Ecology 2011, 20:3692-3699.
19. Renwick J.A.A. The chemical world of crucivores: lures, treats and traps. Entomologia Experimentalis et Applicata 2002, 104:35-42.
20. Ronquist F., Teslenko M., van der Mark P., Ayres D., Darling A., Hohna S., Larget B., Liu L., Suchard M.A., Huelsenbeck J.P. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 2012, 61:539-542.
21. Saharan G.S., Verma P.R. White Rusts: a review of economically important species 1992, IDRC, Ottawa.
22. Shahid A. Status and evaluation of rapeseed-mustard germplasm against white rust (Albugo candida) disease in intermediate zone of Jammu region. Journal of Research SKUAST-J 2005, 4:111-117.
23. Thines M., Choi Y.-J., Kemen E., Ploch S., Holub E.B., Shin H.-D., Jones J.D.G. A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae). Persoonia 2009, 22:123-128.
24. Thines M., Kamoun S. Oomycete-plant coevolution: recent advances and future prospects. Current Opinion in Plant Biology 2010, 13:1-7.
25. Toneatto F. Genetics and Distribution of Insect Resistance Polymorphism in Barbarea vulgaris 2009, Ph.D. thesis, University of Copenhagen, Denmark.
26. Van der Auwera G., Chapelle S., De Wachter R. Structure of the large ribosomal subunit RNA of Phytophthora megasperma, and phylogeny of the oomycetes. FEBS Letters 1994, 338:133-136.
27. Voglmayr H., Riethmüller A. Phylogenetic relationships of Albugo species (white blister rusts) based on LSU rDNA sequence and oospore data. Mycological Research 2006, 110:75-85.