Rainfall and temperatures changes have confounding impacts on Phytophthora cinnamomi occurrence risk in the southwestern USA under climate change scenarios

Global Change Biology

Volumn 20, Issue 4, 2014, Pages 1299-1312

  Thompson, Sally E ^a   Levin, Simon ^b   Rodriguez Iturbe, Ignacio ^c  

^a Berkeley   (United States)

^b PRINCETON UNIVERSITY   (United States)

^c Princeton University   (United States)

Author keywords

California; Climate change; Edaphic; Multiple stressors; Phytophthora cinnamomi; Plant pathogen; Rainfall; Stochastic modeling

Indexed keywords

CLIMATE CHANGE; EUKARYOTE; GLOBAL CHANGE; NUMERICAL MODEL; PATHOGEN; RAINFALL; SOIL TEMPERATURE; SPECIES OCCURRENCE; STOCHASTICITY;

CALIFORNIA; UNITED STATES;

PHYTOPHTHORA CINNAMOMI;

RAIN;

BIOLOGICAL MODEL; CLIMATE CHANGE; MICROBIOLOGY; PATHOGENICITY; PHYSIOLOGY; PHYTOPHTHORA; PLANT DISEASE; SEASON; STATISTICS; TEMPERATURE; UNITED STATES;

CLIMATE CHANGE; MODELS, BIOLOGICAL; PHYTOPHTHORA; PLANT DISEASES; RAIN; SEASONS; SOIL MICROBIOLOGY; SOUTHWESTERN UNITED STATES; STOCHASTIC PROCESSES; TEMPERATURE;

EID: 84896704899     PISSN: 13541013     EISSN: 13652486     Source Type: Journal    
DOI: 10.1111/gcb.12463     Document Type: Article

References (85)

1. Agrios G (2005) Plant Pathology. Elsevier Academic Press, San Diego, CA.
2. Allen CD, Macalady AK, Chenchouni H et al. (2010) A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests. Forest Ecology and Management, 259, 660-684.
3. Balci Y, Halmschlager E (2003) Incidence of Phytophthora species in oak forests in Austria and their possible involvement in oak decline. Forest Pathology, 33, 157-174.
4. Baldwin B, Goldman D, Keil D, Patterson R, Rosatti T, Wilken D (2012) The Jepson Manual: Vascular Plants of California (2nd edn). University of California Press, Berkeley, CA.
5. Barbour M, Keeler-Wolf T, Shoenheer AA (2007) Terrestrial Vegetation of California. University of California Press, Berkeley, CA.
6. Batini F, Hopkins E (1972) Phytophthora cinnamomi rands - a root pathogen of the Jarrah forest. Australian Forestry, 36, 57-68.
7. Benjamin M, Newhook F (1981) Effect of glass microbeads on Phytophthora zoospore motility. Transactions of the British Mycological Society, 78, 43-46.
8. Benson D, Grand L, Veria C, Gottwald T (2006) Temporal and spatial epidemiology of Phytophthora root rot in Fraser Fir plantations. Plant Disease, 90, 1171-1180.
9. Bergot M, Cloppet E, Perarnaud V, Deque M, Marcais B, Desprez-Loustau ML (2004) Simulation of potential range expansion of oak disease caused by Phytophthora cinnamomi under climate change. Global Change Biology, 10, 1539-1552.
10. Boland G, Melzer M, Hopkin A, Higgins V, Nassuth A (2004) Climate change and plant diseases in Ontario. Canadian Journal of Plant Pathology, 26, 335-350.
11. Brasier CM, Scott JK (1994) European oak declines and global warming: a theoretical assessment with special reference to the activity of Phytophthora cinnamomi. EPPO Bulletin, 24, 221-232.
12. Broadbent P, Baker K (1974) Behaviour of Phytophthora cinnamomi in soils suppressive and conducive to root rot. Crop and Pasture Science, 25, 121-137.
13. Brouwers N, Matusick G, Ruthrof K, Lyons T, Hardy G (2013) Landscape-scale assessment of tree crown dieback following extreme drought and heat in a Mediterranean eucalypt forest ecosystem. Landscape Ecology, 28, 69-80.
14. Bryla D, Linderman R (2007) Implications of irrigation method and amount of water application on Phytophthora and Pythium infection and severity of root rot in highbush blueberry. HortScience, 42, 1463-1467.
15. Cayan D, Tyree M, Dettinger M et al. (2009) Climate change scenarios and sea level rise estimates for California - 2008 climate change scenarios assessment - final report. Available at: http://www.energy.ca.gov/publications/displayOneReport.php?pubNum=CEC-5 00-2009-014-F (accessed 20 June 2013).
16. Chakraborty S (2005) Potential impact of climate change on plant-pathogen interactions. Australasian Plant Pathology, 34, 443-448.
17. Chakraborty S, Tiedemann AV, Teng PS (2000) Climate change: potential impact on plant diseases. Environmental Pollution, 108, 317-326.
18. Chavarriaga D, Bodles WJA, Leifert C, Belbahri L, Woodward S (2007) Phytophthora cinnamomi and other fine root pathogens in north temperate pine forests. FEMS Microbiology Letters, 276, 67-74.
19. Clapp R, Hornberger G (1978) Empirical equations for some soil hydraulic properties. Water Resources Research, 14, 601-604.
20. Coakley S, Scherm H, Chakraborty S (1999) Climate change and plant disease management. Annual Review of Phytopathology, 37, 399-426.
21. Collins WD, Bitz CM, Blackmon ML et al. (2006) The community climate system model version 3 (ccsm3). Journal of Climate, 19, 2122-2143.
22. Desprez-Loustau ML, Marcais B, Nageleisen LM, Piou D, Vannini A (2006) Interactive effects of drought and pathogens in forest trees. Annals of Forest Science, 63, 597-612.
23. Dunstan WA, Rudman T, Shearer BL et al. (2009) Containment and spot eradication of a highly destructive, invasive plant pathogen (phytophthora cinnamomi) in natural ecosystems. Biological Invasions, 12, 913-925.
24. Elliott M, Chastagner G, Dermott G, DeBauw A, Sniezko R (2010) A first look at genetic variation in resistance to the root pathogen Phytophthora cinnamomi using a range-wide collection of pacific madrone Arbutus menziesii. In: Proceedings of the 4th International Workshop on Genetics of Host-Parasite Interactions in Forestry, General Technical Report PSW-GTR-240, pp. 290-294. US Forest Service, Albany, CA. Available at: http://www.fs.fed.us/psw/publications/documents/psw_gtr240/ps w_gtr240_290.pdf (accessed 17 December 2013).
25. Fabre B, Piou D, Desprez-Loustau ML, Marcais B (2011) Can the emergence of pine Diplodia shoot blight in France be explained by changes in pathogen pressure linked to climate change? Global Change Biology, 17, 3218-3227.
26. Farr D, Rossman A (2013) Fungal database. Available at: http://nt.ars-grin.gov/fungaldatabases/ (accessed 12 September 2013).
27. Fichtner EJ, Rizzo DM, Swiecki TJ, Bernhardt EA (2010) Emergence of Phytophthora cinnamomi in a Sudden Oak Death-impacted forest. In: Proceedings of the Sudden Oak Death Fourth Science Symposium, General Technical Report PSW-GTR-229, pp. 320-321. US Forest Service, Santa Cruz, CA.
28. Flint L, Flint A (2012) Downscaling future climate scenarios to fine scales for hydrologic and ecological modeling and analysis. Ecological Processes, 1, 1-15.
29. Garbelotto M, Huberli D, Shaw D (2006) First report on an infestation of Phytophthora cinnamomi in natural oak woodlands of California and its differential impact on two native oak species. Plant Disease, 90, 685.
30. Garkaklis MJ, Calver MC, Hardy GES (2004) Habitat alteration caused by introduced plant disease: a significant threat to the conservation of Australian forest fauna. In: Conservation of Australians Forest Fauna (ed. Lunney D), pp. 899-913. Royal Zoological Society of New South Wales, Mosman, NSW.
31. Garrett KA, Dendy SP, Frank EE, Rouse MN, Travers SE (2006) Climate change effects on plant disease: genomes to ecosystems. Annual Review of Phytopathology, 44, 489-509.
32. Gilliam H (2002) Weather of the San Francisco Bay Region (2nd edn). University of California Press, Berkeley, CA.
33. Harham A (2005) Phytophthora cinnamomi. Molecular Plant Pathology, 6, 589-604.
34. Horsthemke W, Lefever R (1984) Noise-induced Transitions: Theory and Applications in Physics, Chemistry and Biology. Springer, New York.
35. Hwang SC, Ko W (1978) Biology of chlamydospores, sporangia, and zoospores of Phytophthora cinnamomi in soil. Phytopathology, 68, 726-731.
36. Ibanez I, Clark J, Dietze M et al. (2006) Predicting biodiversity change: outside the climate envelope, beyond the species-area curve. Ecology, 87, 1896-1906.
37. Jacobs K, MacDonald JD, Berry AM, Costello LR (1997) The effect of low oxygen stress on Phytophthora cinnamomi infection and disease of cork oak roots. In: Proceedings of the Symposium on Oak Woodlands: Ecology, Management, and Urban Interface Issues, USDA Forest Service General Technical Report PSW-GTR-160, pp. 553-558. US Forest Service, San Luis Obispo, CA. Available at: http://www.fs.fed.us/psw/publications/documents/psw_gtr160/ps w_gtr160_04g_jacobs.pdf (accessed 17 December 2013).
38. Jactel H, Petit J, Desprez-Loustau ML, Delzon S, Piou D, Battisti A, Koricheva J (2012) Drought effects on damage by forest insects and pathogens: a meta-analysis. Global Change Biology, 18, 267-276.
39. Jönsson U (2006) A conceptual model for the development of Phytophthora disease in Quercus robur. New Phytologist, 171, 55-68.
40. Judelson H, Blanco F (2005) The spores of Phytophthora: weapons of the plant destroyer. Nature Reviews Microbiology, 3, 47-58.
41. Kang S, Kim S, Oh S, Lee D (2000) Predicting spatial and temporal patterns of soil temperature based on topography, surface cover and air temperature. Forest Ecology and Management, 136, 173-184.
42. Kätterer T, Andrön O (2008) Predicting daily soil temperature profiles in arable soils in cold temperate regions from air temperature and leaf area index. Acta Agriculturae Scandinavica, Section B - Soil & Plant Science, 59, 77-86.
43. Laio F, Porporato A, Ridolfi L, Rodriguez-Iturbe I (2001) Plants in water-controlled ecosystems: active role in hydrologic processes and response to water stress - II. Probabilistic soil moisture dynamics. Advances in Water Resources, 24, 707-723.
44. 2: morphological changes in favor of pathogens. Journal of Experimental Botany, 60, 3123-3131.
45. Leuning R, Zhang YQ, Rajaud A, Cleugh H, Tu K (2008) A simple surface conductance model to estimate regional evaporation using MODIS leaf area index and the Penman-Monteith equation. Water Resources Research, 44, doi: 10.1029/2007WR006562.
46. MacDonald J, Duniway J (1978) Influence of the matric and osmotic components of water potential on zoospore discharge in of Phytophthora. Ecology and Epidemiology, 67, 751-757.
47. Malajczuk N, Theodorou C (1979) Influence of water potential on growth and cultural characteristics of Phytophthora cinnamomi. Transactions of the British Mycological Society, 72, 15-18.
48. Marçais B, Dupuis F, Desprez-Loustau M (1996) Modelling the influence of winter frosts on the development of the stem canker of red oak, caused by Phytophthora cinnamomi. Annales des Sciences Forestières, 53, 369-382.
49. Maurer E, Wood A, Adam J, Lettenmaier D, Nijssen B (2002) A long-term hydrologically-based data set of land surface fluxes and states for the conterminous United States. Journal of Climate, 15, 3237-3251.
50. Melloy P, Hollaway G, Luck J, Norton R, Aitken E, Chakraborty S (2010) Production and fitness of Fusarium pseudograminearum inoculum at elevated carbon dioxide in FACE. Global Change Biology, 16, 3363-3373.
51. Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GAB, Kent J (2000) Biodiversity hotspots for conservation priorities. Nature, 403, 853-858.
52. Nesbitt H, Malajczuk N, Glenn A (1978) Effect of soil moisture and temperature on the survival of Phytophthora cinnamomi rands in soil. Soil Biology and Biochemistry, 11, 137-140.
53. Nesbitt HJ, Malajczuk N, Glenn AR (1979) Effect of organic matter on the survival of Phytophthora cinnamomi rands in soil. Soil Biology and Biochemistry, 11, 133-136.
54. Newhook F, Podger F (1972) The role of Phytophthora cinnamomi in Australian and New Zealand forests. Annual Reviews in Phytopathology, 10, 299-326.
55. Pagliaccia D, McKee B, Pond E, Douhan GW (2011) Population genetic structure of Phytophthora cinnamomi associated with Phytophthora root rot of avocado (Persea americana) within California. Phytopathology, 101, S135.
56. Pagliaccia D, Pond E, McKee B, Douhan GW (2013) Population genetic structure of Phytophthora cinnamomi associated with avocado in California and the discovery of a potentially recent introduction of a new clonal lineage. Phytopathology, 103, 91-97.
57. 2. Phytopathology, 94, 221-227.
58. Pangga IB, Hanan J, Chakraborty S (2011) Pathogen dynamics in a crop canopy and their evolution under changing climate. Plant Pathology, 60, 70-81.
59. Pautasso M, Dehnen-Schmutz K, Holdenrieder O et al. (2010) Plant health and global change - some implications for landscape management. Biological Reviews, 85, 729-755.
60. Pautasso M, Doering TF, Garbelotto M, Pellis L, Jeger MJ (2012) Impacts of climate change on plant diseases-opinions and trends. European Journal of Plant Pathology, 133, 295-313.
61. Peters-Lidard CD, Blackburn E, Liang X, Wood EF (1998) The effect of soil thermal conductivity parameterization on surface energy fluxes and temperatures. Journal of the Atmospheric Sciences, 55, 1209-1224.
62. Porporato A, Laio F, Ridolfi L, Rodriguez-Iturbe I (2001) Plants in water-controlled ecosystems: active role in hydrologic processes and response to water stress - III. Vegetation water stress. Advances in Water Resources, 24, 725-744.
63. Rizzo D, Fichtner E (2007) Phytophthora in forests and natural ecosystems of the Americas. In: Proceedings of the Fourth Meeting of the International Union of Forest Research Organizations (IUFRO) Working Party S07.02.09, General Technical Report PSW-GTR-221, pp. 35-44. US Forest Service, Monterey, CA. Available at: http://ucanr.edu/sites/rizzolab/files/142694.pdf#page=47 (accessed 17 December 2013).
64. Scharwz G, Alexander RB (1995) Soils data for the conterminous United States derived from the NRCS State Soil Geographic (STATSGO) Database. Available at: http://water.usgs.gov/lookup/getspatial?ussoils (accessed 17 December 2013).
65. Shea S, Shearer B, Tippett J, Deegan P (1983) Distribution, reproduction and movement of Phytophthora cinnamomi on sites highly conducive to Jarrah Dieback in South Western Australia. Plant Disease, 67, 970-973.
66. Shearer B, Shea S, Deegan P (1987) Temperature-growth relationships of Phytophthora cinnamomi in the secondary phloem of roots of Banksia grandis and Eucalyptus marginata. Phytopathology, 77, 661-665.
67. Shearer BL, Crane CE, Cochrane A (2004) Quantification of the susceptibility of the native flora of the south-west botanical province, Western Australia, to Phytophthora cinnamomi. Australian Journal of Botany, 52, 435-443.
68. Sloan D (2005) Geology of the San Francisco Bay Region. University of California Press, Berkeley, CA.
69. Staff SS (2012) Soil Survey Geographic (SSURGO) database for California. Available at: http://websoilsurvey.sc.egov.usda.gov/App/HomePage.htm (accessed 17 December 2013).
70. Sutherst RW, Constable F, Finlay KJ, Harrington R, Luck J, Zalucki MP (2011) Adapting to crop pest and pathogen risks under a changing climate. Wiley Interdisciplinary Reviews-Climate Change, 2, 220-237.
71. Swiecki TJ, Bernhardt EA, Garbelotto M (2003) First report of root and crown rot caused by Phytophthora cinnamomi affecting native stands of Arctostaphylos myrtifolia and A. viscida in California. Plant Disease, 87, 1395.
72. Swiecki TJ, Bernhardt E, Garbelotto M, Fichtner E (2011) The exotic plant pathogen Phytophthora cinnamomi: a major threat to rare Acrtostaphylos and much more. Proceedings of the CNPS Conservation Conference (eds. Willoughby JW, Orr BK, Schierenbeck KA, Jensen NJ), 17-19 January 2009, Sacramento, CA, 367-371.
73. Thompson S, Alvarez-Loayza P, Terborgh J, Katul G (2010) The effects of plant pathogens on tree recruitment in the Western Amazon under a projected future climate: a dynamical systems analysis. Journal of Ecology, 98, 1434-1446.
74. Thompson S, Levin S, Rodriguez-Iturbe R (2013) Linking plant disease risk and precipitation drivers: a dynamical systems framework. The American Naturalist, 181, E1-E16.
75. Tidwell TE, Kosta KL, Henderson JC (1984) Root rot of Western Swordfern Polystichum munitum caused by Phytophthora cinnamomi in California USA. Plant Disease, 68, 536.
76. Tippett J, Crombie D, Hill T (1987) Effect of phloem water relations on the growth of Phytophthora cinnamomi in Eucalyptus marginata. Phytopathology, 77, 246-250.
77. Tippett J, McGrath J, Hill T (1989) Site and seasonal effects on susceptibility of Eucalyptus marginata to Phytophthora cinnamomi. Australian Journal of Botany, 37, 481-490.
78. Torregrosa A, Taylor MD, Flint LE, Flint AL (2013) Present, future, and novel bioclimates of the San Francisco, California region. PLoS ONE, 8, e58450.
79. van Vuuren D, Edmonds J, Kainuma M et al. (2011) The representative concentration pathways: an overview. Climatic Change, 109, 5-31.
80. Weste G, Law C (1973) The invasion of native forest by Phytophthora cinnamomi. III. Threat to the National Park, Wilson's Promontory, Victoria. Australian Journal of Botany, 21, 31-51.
81. Weste G, Marks GC (1987) The biology of Phytophthora cinnamomi in Australasian forests. Annual Review of Phytopathology, 25, 207-229.
82. Weste G, Taylor P (1987) The invasion of native forest by Phytophthora cinnamomi. I. Brisbane Ranges, Victoria. Australian Journal of Botany, 19, 281-294.
83. Zentmyer GA (1980) Phytophthora cinnamomi and the Diseases it Causes. 10. American Phytopathological Society, St. Paul, MN.
84. Zentmyer G, Leary J, Klure LJ, Grantham G (1976) Variability in growth of Phytophthora cinnomomi in relation to temperature. Phytopathology, 66, 982-986.
85. Zheng D, Hunt ER Jr, Running SW (1993) A daily soil temperature model based on air temperature and precipitation for continental applications. Climate Research, 2, 183-191.