메뉴 건너뛰기




Volumn 41, Issue 10, 2014, Pages 4929-4938

An agent-based solution for dynamic multi-node wavefront balancing in biological sequence comparison

Author keywords

Agent based approach; Bioinformatics algorithms; Heterogeneous multi node wavefront method; Parallel biological sequence comparison; Smith Waterman algorithm

Indexed keywords

ALGORITHMS; AUTONOMOUS AGENTS; BIOINFORMATICS; DATA TRANSFER; WAVEFRONTS;

EID: 84896527102     PISSN: 09574174     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.eswa.2014.01.030     Document Type: Article
Times cited : (6)

References (22)
  • 4
    • 27844603905 scopus 로고    scopus 로고
    • Applications of artificial intelligence in bioinformatics: A review
    • DOI 10.1016/j.eswa.2005.09.042, PII S0957417405002344, Intelligent Bioinformatics Systems
    • Z. Ezziane Applications of artificial intelligence in bioinformatics: A review Expert Systems with Applications 30 1 2006 2 10 [Intelligent Bioinformatics Systems] (Pubitemid 41641815)
    • (2006) Expert Systems with Applications , vol.30 , Issue.1 , pp. 2-10
    • Ezziane, Z.1
  • 6
    • 0020484488 scopus 로고
    • An improved algorithm for matching biological sequences
    • O. Gotoh An improved algorithm for matching biological sequences Journal of Molecular Biology 162 3 1982 705 708
    • (1982) Journal of Molecular Biology , vol.162 , Issue.3 , pp. 705-708
    • Gotoh, O.1
  • 7
    • 84885951188 scopus 로고    scopus 로고
    • Case-based reasoning adaptation of numerical representations of human organs by interpolation
    • J. Henriet, P.-E. Leni, R. Laurent, and M. Salomon Case-based reasoning adaptation of numerical representations of human organs by interpolation Expert Systems with Applications 41 2 2014 260 266
    • (2014) Expert Systems with Applications , vol.41 , Issue.2 , pp. 260-266
    • Henriet, J.1    Leni, P.-E.2    Laurent, R.3    Salomon, M.4
  • 8
    • 80054944455 scopus 로고    scopus 로고
    • Combinatorial optimization in biology using probability collectives multi-agent systems
    • C.-F. Huang Combinatorial optimization in biology using probability collectives multi-agent systems Expert Systems with Applications 39 2 2012 1763 1771
    • (2012) Expert Systems with Applications , vol.39 , Issue.2 , pp. 1763-1771
    • Huang, C.-F.1
  • 10
    • 84889670444 scopus 로고    scopus 로고
    • Cell cycle phase detection with cell deformation analysis
    • H. Lee, and Y.-P.P. Chen Cell cycle phase detection with cell deformation analysis Expert Systems with Applications 41 6 2014 2644 2651
    • (2014) Expert Systems with Applications , vol.41 , Issue.6 , pp. 2644-2651
    • Lee, H.1    Chen, Y.-P.P.2
  • 11
    • 84875688710 scopus 로고    scopus 로고
    • Cudasw++ 3.0: Accelerating smith-waterman protein database search by coupling cpu and gpu simd instructions
    • Y. Liu, A. Wirawan, and B. Schmidt Cudasw++ 3.0: Accelerating smith-waterman protein database search by coupling cpu and gpu simd instructions BMC Bioinformatics 14 2013 117
    • (2013) BMC Bioinformatics , vol.14 , pp. 117
    • Liu, Y.1    Wirawan, A.2    Schmidt, B.3
  • 13
    • 84887181683 scopus 로고    scopus 로고
    • Two-steps learning of fuzzy cognitive maps for prediction and knowledge discovery on the HIV-1 drug resistance
    • [Methods and Applications of Artificial and Computational Intelligence]
    • G. Napoles, I. Grau, R. Bello, and R. Grau Two-steps learning of fuzzy cognitive maps for prediction and knowledge discovery on the HIV-1 drug resistance Expert Systems with Applications 41 3 2014 821 830 [Methods and Applications of Artificial and Computational Intelligence]
    • (2014) Expert Systems with Applications , vol.41 , Issue.3 , pp. 821-830
    • Napoles, G.1    Grau, I.2    Bello, R.3    Grau, R.4
  • 17
    • 84896511662 scopus 로고    scopus 로고
    • Parallelizing and analyzing the behavior of sequence alignment algorithm on a cluster of workstations for large datasets
    • [published by Foundation of Computer Science, NY, USA]
    • S.R. Sathe, and D.D. Shrimankar Parallelizing and analyzing the behavior of sequence alignment algorithm on a cluster of workstations for large datasets International Journal of Computer Applications 74 21 2013 18 30 [published by Foundation of Computer Science, NY, USA]
    • (2013) International Journal of Computer Applications , vol.74 , Issue.21 , pp. 18-30
    • Sathe, S.R.1    Shrimankar, D.D.2
  • 18
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • T.F. Smith, and M.S. Waterman Identification of common molecular subsequences Journal of Molecular Biology 147 1 1981 195 197
    • (1981) Journal of Molecular Biology , vol.147 , Issue.1 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 20
    • 77955652031 scopus 로고    scopus 로고
    • A collaborative multiagent system for mining transcriptional regulatory elements
    • Y. Xiong, G. Zheng, Q. Yang, and Y. Zhu A collaborative multiagent system for mining transcriptional regulatory elements IEEE Intelligent Systems 24 3 2009 26 37
    • (2009) IEEE Intelligent Systems , vol.24 , Issue.3 , pp. 26-37
    • Xiong, Y.1    Zheng, G.2    Yang, Q.3    Zhu, Y.4
  • 22
    • 84866036611 scopus 로고    scopus 로고
    • Optimization schemes and performance evaluation of smith-waterman algorithm on cpu, gpu and fpga
    • D. Zhou, Y. Dou, and F. Xia Optimization schemes and performance evaluation of smith-waterman algorithm on cpu, gpu and fpga Concurrency and Computation: Practice and Experience 24 14 2012 1625 1644
    • (2012) Concurrency and Computation: Practice and Experience , vol.24 , Issue.14 , pp. 1625-1644
    • Zhou, D.1    Dou, Y.2    Xia, F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.