-
1
-
-
77955885762
-
The effect of recombination on the reconstruction of ancestral sequences
-
Arenas M., Posada D. The effect of recombination on the reconstruction of ancestral sequences. Genetics 2010, 184:1133-1139.
-
(2010)
Genetics
, vol.184
, pp. 1133-1139
-
-
Arenas, M.1
Posada, D.2
-
2
-
-
70350545931
-
The replicase gene of avian coronavirus infectious bronchitis virus is a determinant of pathogenicity
-
Armesto M., Cavanagh D., Britton P. The replicase gene of avian coronavirus infectious bronchitis virus is a determinant of pathogenicity. PLoS ONE 2009, 4:e7384.
-
(2009)
PLoS ONE
, vol.4
-
-
Armesto, M.1
Cavanagh, D.2
Britton, P.3
-
3
-
-
1442348812
-
Comparisons of envelope through 5B sequences of infectious bronchitis coronaviruses indicates recombination occurs in the envelope and membrane genes
-
Brooks J.E., Rainer A.C., Parr R.L., Woolcock P., Hoerr F., Collisson E.W. Comparisons of envelope through 5B sequences of infectious bronchitis coronaviruses indicates recombination occurs in the envelope and membrane genes. Virus Res. 2004, 100:191-198.
-
(2004)
Virus Res.
, vol.100
, pp. 191-198
-
-
Brooks, J.E.1
Rainer, A.C.2
Parr, R.L.3
Woolcock, P.4
Hoerr, F.5
Collisson, E.W.6
-
4
-
-
74849086825
-
Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses
-
Carstens E.B. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses. Arch. Virol. 2010, 15:133-146.
-
(2010)
Arch. Virol.
, vol.15
, pp. 133-146
-
-
Carstens, E.B.1
-
5
-
-
84945769565
-
Infectious bronchitis virus - evidence for recombination within the Massachusetts serotype
-
Cavanagh D., Davis P.J., Cook J. Infectious bronchitis virus - evidence for recombination within the Massachusetts serotype. Avian Pathol. 1992, 21:401-408.
-
(1992)
Avian Pathol.
, vol.21
, pp. 401-408
-
-
Cavanagh, D.1
Davis, P.J.2
Cook, J.3
-
6
-
-
68249122816
-
Infectious bronchitis
-
Wiley-Blackwell Publishing, Iowa, Y.M. Saif, A.M. Fadly, J.R. Glisson, L.R. McDougald, L.K. Nolan, D.E. Swayne (Eds.)
-
Cavanagh D., Gelb J. Infectious bronchitis. Diseases of Poultry 2008, 117-135. Wiley-Blackwell Publishing, Iowa. Y.M. Saif, A.M. Fadly, J.R. Glisson, L.R. McDougald, L.K. Nolan, D.E. Swayne (Eds.).
-
(2008)
Diseases of Poultry
, pp. 117-135
-
-
Cavanagh, D.1
Gelb, J.2
-
7
-
-
0031783819
-
Does IBV change slowly despite the capacity of the spike protein to vary greatly?
-
Cavanagh D., Mawditt K., Adzhar A., Gough R.E., Picault J.P., Naylor C.J., Haydon D., Shaw K., Britton P. Does IBV change slowly despite the capacity of the spike protein to vary greatly?. Adv. Exp. Med. Biol. 1998, 440:729-734.
-
(1998)
Adv. Exp. Med. Biol.
, vol.440
, pp. 729-734
-
-
Cavanagh, D.1
Mawditt, K.2
Adzhar, A.3
Gough, R.E.4
Picault, J.P.5
Naylor, C.J.6
Haydon, D.7
Shaw, K.8
Britton, P.9
-
8
-
-
0027997834
-
A cis-acting function for the coronavirus leader in defective interfering RNA replication
-
Chang R.Y., Hofmann M.A., Sethna P.B., Brian D.A. A cis-acting function for the coronavirus leader in defective interfering RNA replication. J. Virol. 1994, 68:8223-8231.
-
(1994)
J. Virol.
, vol.68
, pp. 8223-8231
-
-
Chang, R.Y.1
Hofmann, M.A.2
Sethna, P.B.3
Brian, D.A.4
-
9
-
-
24644432582
-
Selection of and recombination between minor variants lead to the adaptation of an avian coronavirus to primate cells
-
Fang S.G., Shen S., Tay F.P., Liu D.X. Selection of and recombination between minor variants lead to the adaptation of an avian coronavirus to primate cells. Biochem. Biophys. Res. Commun. 2005, 336:417-423.
-
(2005)
Biochem. Biophys. Res. Commun.
, vol.336
, pp. 417-423
-
-
Fang, S.G.1
Shen, S.2
Tay, F.P.3
Liu, D.X.4
-
10
-
-
77950806408
-
New algorithms and methods to estimate maximum-likehood phylogenies: assessing the performance of PhyML 3.0
-
Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O. New algorithms and methods to estimate maximum-likehood phylogenies: assessing the performance of PhyML 3.0. Syst. Biol. 2010, 59:307-321.
-
(2010)
Syst. Biol.
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
Gascuel, O.6
-
11
-
-
10044280770
-
Recombinant infectious bronchitis coronavirus beaudette with the spike protein gene of the pathogenic M41 strain remains attenuated but induces protective immunity
-
Hodgson T., Casais R., Dove B., Britton P., Cavanagh D. Recombinant infectious bronchitis coronavirus beaudette with the spike protein gene of the pathogenic M41 strain remains attenuated but induces protective immunity. J. Virol. 2004, 78:13804-13811.
-
(2004)
J. Virol.
, vol.78
, pp. 13804-13811
-
-
Hodgson, T.1
Casais, R.2
Dove, B.3
Britton, P.4
Cavanagh, D.5
-
12
-
-
84871726428
-
Review of infectious bronchitis virus around the world
-
Jackwood M.W. Review of infectious bronchitis virus around the world. Avian Dis. 2012, 56:634-641.
-
(2012)
Avian Dis.
, vol.56
, pp. 634-641
-
-
Jackwood, M.W.1
-
13
-
-
76049116933
-
Emergence of a group 3 coronavirus through recombination
-
Jackwood M.W., Boynton T.O., Hilt D.A., McKinley E.T., Kissinger J.C., Paterson A.H., Robertson J., Lemke C., McCall A.W., Williams S.M., Jackwood J.W., Byrd L.A. Emergence of a group 3 coronavirus through recombination. Virology 2010, 398:98-108.
-
(2010)
Virology
, vol.398
, pp. 98-108
-
-
Jackwood, M.W.1
Boynton, T.O.2
Hilt, D.A.3
McKinley, E.T.4
Kissinger, J.C.5
Paterson, A.H.6
Robertson, J.7
Lemke, C.8
McCall, A.W.9
Williams, S.M.10
Jackwood, J.W.11
Byrd, L.A.12
-
14
-
-
33645108873
-
LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters
-
Kuhner M.K. LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters. Bioinformatics 2006, 22:768-770.
-
(2006)
Bioinformatics
, vol.22
, pp. 768-770
-
-
Kuhner, M.K.1
-
15
-
-
33846515096
-
Comparing likelihood and Bayesian coalescent estimation of population parameters
-
Kuhner M.K., Smith L.P. Comparing likelihood and Bayesian coalescent estimation of population parameters. Genetics 2007, 175:155-165.
-
(2007)
Genetics
, vol.175
, pp. 155-165
-
-
Kuhner, M.K.1
Smith, L.P.2
-
16
-
-
0024439812
-
Analysis of an immunodominant region of infectious bronchitis virus
-
Kusters J.G., Jager E.J., Lenstra J.A., Koch G., Posthumus W.P., Meloen R.H., van der Zeijst B.A. Analysis of an immunodominant region of infectious bronchitis virus. J. Immunol. 1989, 143:2692-2698.
-
(1989)
J. Immunol.
, vol.143
, pp. 2692-2698
-
-
Kusters, J.G.1
Jager, E.J.2
Lenstra, J.A.3
Koch, G.4
Posthumus, W.P.5
Meloen, R.H.6
van der Zeijst, B.A.7
-
17
-
-
0026593989
-
Genetic recombination in RNA viruses
-
Lai M.M. Genetic recombination in RNA viruses. Curr. Top. Microbiol. Immunol. 1992, 176:21-32.
-
(1992)
Curr. Top. Microbiol. Immunol.
, vol.176
, pp. 21-32
-
-
Lai, M.M.1
-
18
-
-
84871911421
-
Comparative analysis of four Massachusetts type infectious bronchitis coronavirus genomes reveals a novel Massachusetts type strain and evidence of natural recombination in the genome
-
Liu X., Shao Y., Ma H., Sun C., Zhang X., Li C., Han Z., Yan B., Kong X., Liu S. Comparative analysis of four Massachusetts type infectious bronchitis coronavirus genomes reveals a novel Massachusetts type strain and evidence of natural recombination in the genome. Infect. Genet. Evol. 2013, 14:29-38.
-
(2013)
Infect. Genet. Evol.
, vol.14
, pp. 29-38
-
-
Liu, X.1
Shao, Y.2
Ma, H.3
Sun, C.4
Zhang, X.5
Li, C.6
Han, Z.7
Yan, B.8
Kong, X.9
Liu, S.10
-
19
-
-
84872492033
-
Characterization of a recombinant coronavirus infectious bronchitis virus with distinct S1 subunits of spike and nucleocapsid genes and a 3' untranslated region
-
Liu X., Ma H., Xu Q., Sun N., Han Z., Sun C., Guo H., Shao Y., Kong X., Liu S. Characterization of a recombinant coronavirus infectious bronchitis virus with distinct S1 subunits of spike and nucleocapsid genes and a 3' untranslated region. Vet. Microbiol. 2013, 162:429-436.
-
(2013)
Vet. Microbiol.
, vol.162
, pp. 429-436
-
-
Liu, X.1
Ma, H.2
Xu, Q.3
Sun, N.4
Han, Z.5
Sun, C.6
Guo, H.7
Shao, Y.8
Kong, X.9
Liu, S.10
-
20
-
-
0032889281
-
Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
-
Lole K.S., Bollinger R.C., Paranjape R.S., Gadkari D., Kulkarni S.S., Novak N.G., Ingersoll R., Sheppard H.W., Ray S.C. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J. Virol. 1999, 73:152-160.
-
(1999)
J. Virol.
, vol.73
, pp. 152-160
-
-
Lole, K.S.1
Bollinger, R.C.2
Paranjape, R.S.3
Gadkari, D.4
Kulkarni, S.S.5
Novak, N.G.6
Ingersoll, R.7
Sheppard, H.W.8
Ray, S.C.9
-
21
-
-
33746317830
-
The molecular biology of coronaviruses
-
Masters P.S. The molecular biology of coronaviruses. Adv. Virus Res. 2006, 66:193-292.
-
(2006)
Adv. Virus Res.
, vol.66
, pp. 193-292
-
-
Masters, P.S.1
-
22
-
-
79956295589
-
Attenuated live vaccine usage affects accurate measures of virus diversity and mutation rates in avian coronavirus infectious bronchitis virus
-
McKinley E.T., Jackwood M.W., Hilt D.A., Kissinger J.C., Robertson J.S., Lemke C., Paterson A.H. Attenuated live vaccine usage affects accurate measures of virus diversity and mutation rates in avian coronavirus infectious bronchitis virus. Virus Res. 2011, 158:225-234.
-
(2011)
Virus Res.
, vol.158
, pp. 225-234
-
-
McKinley, E.T.1
Jackwood, M.W.2
Hilt, D.A.3
Kissinger, J.C.4
Robertson, J.S.5
Lemke, C.6
Paterson, A.H.7
-
23
-
-
0037942817
-
Stem-loop III in the 5' untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication
-
Raman S., Bouma P., Williams G.D., Brian D.A. Stem-loop III in the 5' untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication. J. Virol. 2003, 77:6720-6730.
-
(2003)
J. Virol.
, vol.77
, pp. 6720-6730
-
-
Raman, S.1
Bouma, P.2
Williams, G.D.3
Brian, D.A.4
-
24
-
-
25144448646
-
Stem-loop IV in the 5' untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication
-
Raman S., Brian D.A. Stem-loop IV in the 5' untranslated region is a cis-acting element in bovine coronavirus defective interfering RNA replication. J. Virol. 2005, 79:12434-12446.
-
(2005)
J. Virol.
, vol.79
, pp. 12434-12446
-
-
Raman, S.1
Brian, D.A.2
-
25
-
-
33745158157
-
A simple method of estimating fifty percent endpoints
-
Reed L.J., Muench H. A simple method of estimating fifty percent endpoints. Am. J. Hygiene 1938, 27:493-497.
-
(1938)
Am. J. Hygiene
, vol.27
, pp. 493-497
-
-
Reed, L.J.1
Muench, H.2
-
26
-
-
0033793521
-
Consequences of recombination on traditional phylogenetic analysis
-
Schierup M.H., Hein J. Consequences of recombination on traditional phylogenetic analysis. Genetics 2000, 156:879-891.
-
(2000)
Genetics
, vol.156
, pp. 879-891
-
-
Schierup, M.H.1
Hein, J.2
-
27
-
-
0027268695
-
Evidence of natural recombination within the S1 gene of infectious bronchitis virus
-
Wang L., Junker D., Collisson E.W. Evidence of natural recombination within the S1 gene of infectious bronchitis virus. Virology 1993, 92:710-716.
-
(1993)
Virology
, vol.92
, pp. 710-716
-
-
Wang, L.1
Junker, D.2
Collisson, E.W.3
-
28
-
-
70349669409
-
Coronavirus diversity, phylogeny and interspecies jumping
-
Woo P.C., Lau S.K., Huang Y., Yuen K.Y. Coronavirus diversity, phylogeny and interspecies jumping. Exp. Biol. Med. 2009, 234:1117-1127.
-
(2009)
Exp. Biol. Med.
, vol.234
, pp. 1117-1127
-
-
Woo, P.C.1
Lau, S.K.2
Huang, Y.3
Yuen, K.Y.4
|