-
2
-
-
32544433477
-
Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: Effects of diagnosis, bias correction, and slice location
-
DOI 10.1002/hbm.20161
-
Fennema-Notestine C, Ozyurt IB, Clark CP, Morris S, Bischoff-Grethe A, et al. (2006) Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: Effects of diagnosis, bias correction, and slice location. Human Brain Mapping 27: 99-113. (Pubitemid 43238483)
-
(2006)
Human Brain Mapping
, vol.27
, Issue.2
, pp. 99-113
-
-
Fennema-Notestine, C.1
Ozyurt, I.B.2
Clark, C.P.3
Morris, S.4
Bischoff-Grethe, A.5
Bondi, M.W.6
Jernigan, T.L.7
Fischl, B.8
Segonne, F.9
Shattuck, D.W.10
Leahy, R.M.11
Rex, D.E.12
Toga, A.W.13
Zou, K.H.14
Brown, G.G.15
-
3
-
-
60149104284
-
Online resource for validation of brain segmentation methods
-
Shattuck DW, Prasad G, Mirza M, Narr KL, Toga AW (2009) Online resource for validation of brain segmentation methods. NeuroImage 45: 431-439.
-
(2009)
NeuroImage
, vol.45
, pp. 431-439
-
-
Shattuck, D.W.1
Prasad, G.2
Mirza, M.3
Narr, K.L.4
Toga, A.W.5
-
4
-
-
84868237036
-
Groupwise Segmentation Improves Neuroimaging Classification Accuracy
-
Springer Berlin Heidelberg
-
Wang Y, Jia H, Yap P-T, Cheng B, Wee C-Y, et al. (2012) Groupwise Segmentation Improves Neuroimaging Classification Accuracy. Multimodal Brain Image Analysis: Springer Berlin Heidelberg. pp. 185-193.
-
(2012)
Multimodal Brain Image Analysis
, pp. 185-193
-
-
Wang, Y.1
Jia, H.2
Yap, P.-T.3
Cheng, B.4
Wee, C.-Y.5
-
6
-
-
31544443575
-
The Alzheimer's disease neuroimaging initiative
-
DOI 10.1016/j.nic.2005.09.008, PII S1052514905001024, Alzheimer's Disease: 100 Years of Progress
-
Mueller SG, Weiner MW, Thal LJ, Petersen RC, Jack C, et al. (2005) The Alzheimer's Disease Neuroimaging Initiative. Neuroimaging clinics of North America 15: 869-877. (Pubitemid 43162384)
-
(2005)
Neuroimaging Clinics of North America
, vol.15
, Issue.4
, pp. 869-877
-
-
Mueller, S.G.1
Weiner, M.W.2
Thal, L.J.3
Petersen, R.C.4
Jack, C.5
Jagust, W.6
Trojanowski, J.Q.7
Toga, A.W.8
Beckett, L.9
-
7
-
-
34548409688
-
Open Access Series of Imaging Studies (OASIS): Cross-sectional MRI data in young, middle aged, nondemented, and demented older adults
-
DOI 10.1162/jocn.2007.19.9.1498
-
Marcus DS, Wang TH, Parker J, Csernansky JG, Morris JC, et al. (2007) Open Access Series of Imaging Studies (OASIS): Cross-sectional MRI Data in Young, Middle Aged, Nondemented, and Demented Older Adults. Journal of Cognitive Neuroscience 19: 1498-1507. (Pubitemid 47358152)
-
(2007)
Journal of Cognitive Neuroscience
, vol.19
, Issue.9
, pp. 1498-1507
-
-
Marcus, D.S.1
Wang, T.H.2
Parker, J.3
Csernansky, J.G.4
Morris, J.C.5
Buckner, R.L.6
-
8
-
-
32644441220
-
The NIH MRI study of normal brain development
-
Evans AC (2006) The NIH MRI study of normal brain development. NeuroImage 30: 184-202.
-
(2006)
NeuroImage
, vol.30
, pp. 184-202
-
-
Evans, A.C.1
-
12
-
-
0026608593
-
Interactive 3D Segmentation of MRI and CT Volumes using Morphological Operations
-
Höhne KH, Hanson WA (1992) Interactive 3D Segmentation of MRI and CT Volumes using Morphological Operations. Journal of Computer Assisted Tomography 16: 285-294.
-
(1992)
Journal of Computer Assisted Tomography
, vol.16
, pp. 285-294
-
-
Höhne, K.H.1
Hanson, W.A.2
-
13
-
-
0030153655
-
Segmentation of brain tissue from magnetic resonance images
-
Kapur T, Grimson WEL, Wells Iii WM, Kikinis R (1996) Segmentation of brain tissue from magnetic resonance images. Medical Image Analysis 1: 109-127. (Pubitemid 126421959)
-
(1996)
Medical Image Analysis
, vol.1
, Issue.2
, pp. 109-127
-
-
Kapur, T.1
Eric, W.2
Grimson, L.3
Wells III, W.M.4
Kikinis, R.5
-
14
-
-
0032769863
-
1-weighted volume MRI data
-
DOI 10.1002/(SICI)1522-2594(199907)42:1<127::AID
-
Lemieux L, Hagemann G, Krakow K, Woermann FG (1999) Fast, accurate, and reproducible automatic segmentation of the brain in T1-weighted volume MRI data. Magnetic Resonance in Medicine 42: 127-135. (Pubitemid 29325621)
-
(1999)
Magnetic Resonance in Medicine
, vol.42
, Issue.1
, pp. 127-135
-
-
Lemieux, L.1
Hagemann, G.2
Krakow, K.3
Woermann, F.G.4
-
15
-
-
0036870666
-
Automatic brain tissue extraction method using erosion-dilation treatment (BREED) from three-dimensional magnetic resonance imaging T1-weighted data
-
DOI 10.1097/00004728-200211000-00012
-
Miura N, Taneda A, Shida K, Kawashima R, Kawazoe Y, et al. (2002) Automatic Brain Tissue Extraction Method Using Erosion-Dilation Treatment (BREED) From Three-Dimensional Magnetic Resonance Imaging T1-Weighted Data. Journal of Computer Assisted Tomography 26: 927-932. (Pubitemid 36076708)
-
(2002)
Journal of Computer Assisted Tomography
, vol.26
, Issue.6
, pp. 927-932
-
-
Miura, N.1
Taneda, A.2
Shida, K.3
Kawashima, R.4
Kawazoe, Y.5
Fukuda, H.6
Shimizu, T.7
-
16
-
-
0033646213
-
Automatic Morphology-Based Brain Segmentation (MBRASE) from MRI-T1 Data
-
Stokking R, Vincken KL, Viergever MA (2000) Automatic Morphology-Based Brain Segmentation (MBRASE) from MRI-T1 Data. NeuroImage 12: 726-738.
-
(2000)
NeuroImage
, vol.12
, pp. 726-738
-
-
Stokking, R.1
Vincken, K.L.2
Viergever, M.A.3
-
17
-
-
0036429375
-
Automated histogram-based brain segmentation in T1-weighted three-dimensional magnetic resonance head images
-
DOI 10.1006/nimg.2002.1287
-
Shan ZY, Yue GH, Liu JZ (2002) Automated Histogram-Based Brain Segmentation in T1-Weighted Three-Dimensional Magnetic Resonance Head Images. NeuroImage 17: 1587-1598. (Pubitemid 35333877)
-
(2002)
NeuroImage
, vol.17
, Issue.3
, pp. 1587-1598
-
-
Shan, Z.Y.1
Yue, G.H.2
Liu, J.Z.3
-
18
-
-
0034851632
-
Magnetic resonance image tissue classification using a partial volume model
-
DOI 10.1006/nimg.2000.0730
-
Shattuck DW, Sandor-Leahy SR, Schaper KA, Rottenberg DA, Leahy RM (2001) Magnetic Resonance Image Tissue Classification Using a Partial Volume Model. NeuroImage 13: 856-876. (Pubitemid 32848331)
-
(2001)
NeuroImage
, vol.13
, Issue.5
, pp. 856-876
-
-
Shattuck, D.W.1
Sandor-Leahy, S.R.2
Schaper, K.A.3
Rottenberg, D.A.4
Leahy, R.M.5
-
20
-
-
3042692091
-
Putting our heads together: A consensus approach to brain/non-brain segmentation in T1-weighted MR volumes
-
DOI 10.1016/j.neuroimage.2004.03.011, PII S1053811904001569
-
Rehm K, Schaper K, Anderson J, Woods R, Stoltzner S, et al. (2004) Putting our heads together: a consensus approach to brain/non-brain segmentation in T1-weighted MR volumes. NeuroImage 22: 1262-1270. (Pubitemid 38829215)
-
(2004)
NeuroImage
, vol.22
, Issue.3
, pp. 1262-1270
-
-
Rehm, K.1
Schaper, K.2
Anderson, J.3
Woods, R.4
Stoltzner, S.5
Rottenberg, D.6
-
22
-
-
0032769093
-
Cortical surface-based analysis: I. Segmentation and surface reconstruction
-
DOI 10.1006/nimg.1998.0395
-
Dale AM, Fischl B, Sereno MI (1999) Cortical Surface-Based Analysis: I. Segmentation and Surface Reconstruction. NeuroImage 9: 179-194. (Pubitemid 29369874)
-
(1999)
NeuroImage
, vol.9
, Issue.2
, pp. 179-194
-
-
Dale, A.M.1
Fischl, B.2
Sereno, M.I.3
-
23
-
-
0036828879
-
Fast robust automated brain extraction
-
Smith SM (2002) Fast robust automated brain extraction. Human Brain Mapping 17: 143-155.
-
(2002)
Human Brain Mapping
, vol.17
, pp. 143-155
-
-
Smith, S.M.1
-
24
-
-
33748654013
-
Skull-stripping magnetic resonance brain images using a model-based level set
-
Zhuang AH, Valentino DJ, Toga AW (2006) Skull-stripping magnetic resonance brain images using a model-based level set. NeuroImage 32: 79-92.
-
(2006)
NeuroImage
, vol.32
, pp. 79-92
-
-
Zhuang, A.H.1
Valentino, D.J.2
Toga, A.W.3
-
25
-
-
3042588673
-
A hybrid approach to the skull stripping problem in MRI
-
DOI 10.1016/j.neuroimage.2004.03.032, PII S1053811904001880
-
Ségonne F, Dale AM, Busa E, Glessner M, Salat D, et al. (2004) A hybrid approach to the skull stripping problem in MRI. NeuroImage 22: 1060-1075. (Pubitemid 38829195)
-
(2004)
NeuroImage
, vol.22
, Issue.3
, pp. 1060-1075
-
-
Segonne, F.1
Dale, A.M.2
Busa, E.3
Glessner, M.4
Salat, D.5
Hahn, H.K.6
Fischl, B.7
-
26
-
-
79957473476
-
Simple paradigm for extra-cerebral tissue removal: Algorithm and analysis
-
Carass A, Cuzzocreo J, Wheeler MB, Bazin P-L, Resnick SM, et al. (2011) Simple paradigm for extra-cerebral tissue removal: Algorithm and analysis. NeuroImage 56: 1982-1992.
-
(2011)
NeuroImage
, vol.56
, pp. 1982-1992
-
-
Carass, A.1
Cuzzocreo, J.2
Wheeler, M.B.3
Bazin, P.-L.4
Resnick, S.M.5
-
27
-
-
79952067465
-
Brain MAPS: An automated, accurate and robust brain extraction technique using a template library
-
Leung KK, Barnes J, Modat M, Ridgway GR, Bartlett JW, et al. (2011) Brain MAPS: An automated, accurate and robust brain extraction technique using a template library. NeuroImage 55: 1091-1108.
-
(2011)
NeuroImage
, vol.55
, pp. 1091-1108
-
-
Leung, K.K.1
Barnes, J.2
Modat, M.3
Ridgway, G.R.4
Bartlett, J.W.5
-
28
-
-
5644300854
-
A meta-algorithm for brain extraction in MRI
-
DOI 10.1016/j.neuroimage.2004.06.019, PII S1053811904003283
-
Rex DE, Shattuck DW, Woods RP, Narr KL, Luders E, et al. (2004) A meta-algorithm for brain extraction in MRI. NeuroImage 23: 625-637. (Pubitemid 39370614)
-
(2004)
NeuroImage
, vol.23
, Issue.2
, pp. 625-637
-
-
Rex, D.E.1
Shattuck, D.W.2
Woods, R.P.3
Narr, K.L.4
Luders, E.5
Rehm, K.6
Stolzner, S.E.7
Rottenberg, D.A.8
Toga, A.W.9
-
29
-
-
33845966337
-
Statistical morphological skull stripping of adult and infant MRI data
-
DOI 10.1016/j.compbiomed.2006.04.001, PII S001048250600062X
-
Chiverton J, Wells K, Lewis E, Chen C, Podda B, et al. (2007) Statistical morphological skull stripping of adult and infant MRI data. Computers in Biology and Medicine 37: 342-357. (Pubitemid 46048789)
-
(2007)
Computers in Biology and Medicine
, vol.37
, Issue.3
, pp. 342-357
-
-
Chiverton, J.1
Wells, K.2
Lewis, E.3
Chen, C.4
Podda, B.5
Johnson, D.6
-
30
-
-
0343517060
-
A cooperative framework for segmentation of MRI brain scans
-
DOI 10.1016/S0933-3657(00)00054-3, PII S0933365700000543
-
Germond L, Dojat M, Taylor C, Garbay C (2000) A cooperative framework for segmentation of MRI brain scans. Artificial Intelligence in Medicine 20: 77-93. (Pubitemid 30645576)
-
(2000)
Artificial Intelligence in Medicine
, vol.20
, Issue.1
, pp. 77-93
-
-
Germond, L.1
Dojat, M.2
Taylor, C.3
Garbay, C.4
-
31
-
-
0036288465
-
Automated cerebrum segmentation from three-dimensional sagittal brain MR images
-
DOI 10.1016/S0010-4825(02)00023-9, PII S0010482502000239
-
Huh S, Ketter TA, Sohn KH, Lee C (2002) Automated cerebrum segmentation from three-dimensional sagittal brain MR images. Computers in Biology and Medicine 32: 311-328. (Pubitemid 34717964)
-
(2002)
Computers in Biology and Medicine
, vol.32
, Issue.5
, pp. 311-328
-
-
Huh, S.1
Ketter, T.A.2
Sohn, K.H.3
Lee, C.4
-
32
-
-
0032071267
-
Unsupervised connectivity-based thresholding segmentation of midsagittal brain MR images
-
DOI 10.1016/S0010-4825(98)00013-4, PII S0010482598000134
-
Lee C, Huh S, Ketter TA, Unser M (1998) Unsupervised connectivity-based thresholding segmentation of midsagittal brain MR images. Computers in Biology and Medicine 28: 309-338. (Pubitemid 28435143)
-
(1998)
Computers in Biology and Medicine
, vol.28
, Issue.3
, pp. 309-338
-
-
Lee, C.1
Huh, S.2
Ketter, T.A.3
Unser, M.4
-
34
-
-
0035384136
-
A global optimisation method for robust affine registration of brain images
-
DOI 10.1016/S1361-8415(01)00036-6, PII S1361841501000366
-
Jenkinson M, Smith S (2001) A global optimisation method for robust affine registration of brain images. Medical Image Analysis 5: 143-156. (Pubitemid 35282800)
-
(2001)
Medical Image Analysis
, vol.5
, Issue.2
, pp. 143-156
-
-
Jenkinson, M.1
Smith, S.2
-
36
-
-
82255185706
-
Robust Deformable-Surface-Based Skull-Stripping for Large-Scale Studies
-
Springer Berlin/Heidelberg
-
Wang Y, Nie J, Yap P-T, Shi F, Guo L, et al. (2011) Robust Deformable-Surface-Based Skull-Stripping for Large-Scale Studies. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011: Springer Berlin/Heidelberg. pp. 635-642.
-
(2011)
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011
, pp. 635-642
-
-
Wang, Y.1
Nie, J.2
Yap, P.-T.3
Shi, F.4
Guo, L.5
-
37
-
-
41949137974
-
The Alzheimer's Disease Neuroimaging Initiative (ADNI): MRI methods
-
DOI 10.1002/jmri.21049
-
Jack CR, Bernstein MA, Fox NC, Thompson P, Alexander G, et al. (2008) The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods. Journal of Magnetic Resonance Imaging 27: 685-691. (Pubitemid 351508080)
-
(2008)
Journal of Magnetic Resonance Imaging
, vol.27
, Issue.4
, pp. 685-691
-
-
Jack Jr., C.R.1
Bernstein, M.A.2
Fox, N.C.3
Thompson, P.4
Alexander, G.5
Harvey, D.6
Borowski, B.7
Britson, P.J.8
Whitwell, J.L.9
Ward, C.10
Dale, A.M.11
Felmlee, J.P.12
Gunter, J.L.13
Hill, D.L.G.14
Killiany, R.15
Schuff, N.16
Fox-Bosetti, S.17
Lin, C.18
Studholme, C.19
DeCarli, C.S.20
Krueger, G.21
Ward, H.A.22
Metzger, G.J.23
Scott, K.T.24
Mallozzi, R.25
Blezek, D.26
Levy, J.27
Debbins, J.P.28
Fleisher, A.S.29
Albert, M.30
Green, R.31
Bartzokis, G.32
Glover, G.33
Mugler, J.34
Weiner, M.W.35
more..
-
38
-
-
0031987382
-
A nonparametric method for automatic correction of intensity nonuniformity in mri data
-
PII S0278006298031516
-
Sled JG, Zijdenbos AP, Evans AC (1998) A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Transactions on Medical Imaging 17: 87-97. (Pubitemid 128742012)
-
(1998)
IEEE Transactions on Medical Imaging
, vol.17
, Issue.1
, pp. 87-97
-
-
Sied, J.G.1
Zijdenbos, A.P.2
Evans, A.C.3
-
39
-
-
33744930583
-
User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability
-
DOI 10.1016/j.neuroimage.2006.01.015, PII S1053811906000632
-
Yushkevich PA, Piven J, Hazlett HC, Smith RG, Ho S, et al. (2006) User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability. NeuroImage 31: 1116-1128. (Pubitemid 43851334)
-
(2006)
NeuroImage
, vol.31
, Issue.3
, pp. 1116-1128
-
-
Yushkevich, P.A.1
Piven, J.2
Hazlett, H.C.3
Smith, R.G.4
Ho, S.5
Gee, J.C.6
Gerig, G.7
-
41
-
-
0031729157
-
Rearing condition and plasma cortisol in rhesus monkey infants
-
DOI 10.1002/(SICI)1098-2345(1998)46:4<311::AID
-
Shannon C, Champoux M, Suomi SJ (1998) Rearing condition and plasma cortisol in rhesus monkey infants. American Journal of Primatology 46: 311-321. (Pubitemid 28553980)
-
(1998)
American Journal of Primatology
, vol.46
, Issue.4
, pp. 311-321
-
-
Shannon, C.1
Champoux, M.2
Suomi, S.J.3
-
42
-
-
0031957632
-
Enhancement of MR images using registration for signal averaging
-
DOI 10.1097/00004728-199803000-00032
-
Holmes CJ, Hoge R, Collins L, Woods R, Toga AW, et al. (1998) Enhancement of MR Images Using Registration for Signal Averaging. Journal of Computer Assisted Tomography 22: 324-333. (Pubitemid 28155214)
-
(1998)
Journal of Computer Assisted Tomography
, vol.22
, Issue.2
, pp. 324-333
-
-
Holmes, C.J.1
Hoge, R.2
Collins, L.3
Woods, R.4
Toga, A.W.5
Evans, A.C.6
-
44
-
-
84900394038
-
-
website. Available: Accessed 2011 Dec 4
-
"AFNI" website. Available: http://afni.nimh.nih.gov. Accessed 2011 Dec 4.
-
-
-
-
45
-
-
84861781811
-
Optimizing parameter choice for FSL-Brain Extraction Tool (BET) on 3D T1 images in multiple sclerosis
-
Popescu V, Battaglini M, Hoogstrate WS, Verfaillie SCJ, Sluimer IC, et al. (2012) Optimizing parameter choice for FSL-Brain Extraction Tool (BET) on 3D T1 images in multiple sclerosis. NeuroImage 61: 1484-1494.
-
(2012)
NeuroImage
, vol.61
, pp. 1484-1494
-
-
Popescu, V.1
Battaglini, M.2
Hoogstrate, W.S.3
Verfaillie, S.C.J.4
Sluimer, I.C.5
-
46
-
-
0030893073
-
Selective aging of the human cerebral cortex observed in Vivo: Differential vulnerability of the prefrontal gray matter
-
Raz N, Gunning FM, Head D, Dupuis JH, McQuain J, et al. (1997) Selective aging of the human cerebral cortex observed in vivo: differential vulnerability of the prefrontal gray matter. Cerebral Cortex 7: 268-282. (Pubitemid 27184486)
-
(1997)
Cerebral Cortex
, vol.7
, Issue.3
, pp. 268-282
-
-
Raz, N.1
Gunning, F.M.2
Head, D.3
Dupuis, J.H.4
McQuain, J.5
Briggs, S.D.6
Loken, W.J.7
Thornton, A.E.8
Acker, J.D.9
-
47
-
-
0742305187
-
Shrinkage of the Entorhinal Cortex over Five Years Predicts Memory Performance in Healthy Adults
-
DOI 10.1523/JNEUROSCI.4166-03.2004
-
Rodrigue KM, Raz N (2004) Shrinkage of the Entorhinal Cortex over Five Years Predicts Memory Performance in Healthy Adults. The Journal of Neuroscience 24: 956-963. (Pubitemid 38146606)
-
(2004)
Journal of Neuroscience
, vol.24
, Issue.4
, pp. 956-963
-
-
Rodrigue, K.M.1
Raz, N.2
-
48
-
-
4344621476
-
A voxel-based morphometric study to determine individual differences in gray matter density associated with age and cognitive change over time
-
DOI 10.1093/cercor/bhh057
-
Tisserand DJ, van Boxtel MPJ, Pruessner JC, Hofman P, Evans AC, et al. (2004) A Voxel-based Morphometric Study to Determine Individual Differences in Gray Matter Density Associated with Age and Cognitive Change Over Time. Cerebral Cortex 14: 966-973. (Pubitemid 39121358)
-
(2004)
Cerebral Cortex
, vol.14
, Issue.9
, pp. 966-973
-
-
Tisserand, D.J.1
Van Boxtel, M.P.J.2
Pruessner, J.C.3
Hofman, P.4
Evans, A.C.5
Jolles, J.6
-
49
-
-
0032790894
-
Localizing age-related changes in brain structure between childhood and adolescence using statistical parametric mapping
-
DOI 10.1006/nimg.1999.0436
-
Sowell ER, Thompson PM, Holmes CJ, Batth R, Jernigan TL, et al. (1999) Localizing Age-Related Changes in Brain Structure between Childhood and Adolescence Using Statistical Parametric Mapping. NeuroImage 9: 587-597. (Pubitemid 29369884)
-
(1999)
NeuroImage
, vol.9
, Issue.6 I
, pp. 587-597
-
-
Sowell, E.R.1
Thompson, P.M.2
Holmes, C.J.3
Batth, R.4
Jernigan, T.L.5
Toga, A.W.6
-
50
-
-
73849116467
-
elastix: A toolbox for intensity-based medical image registration
-
Klein S, Staring M, Murphy K, Viergever MA, Pluim J (2010) elastix: a toolbox for intensity-based medical image registration. IEEE Transactions on Medical Imaging 29: 196-205.
-
(2010)
IEEE Transactions on Medical Imaging
, vol.29
, pp. 196-205
-
-
Klein, S.1
Staring, M.2
Murphy, K.3
Viergever, M.A.4
Pluim, J.5
|