Using varscan 2 for germline variant calling and somatic mutation detection

Current Protocols in Bioinformatics

Volumn , Issue SUPPL.44, 2013, Pages

  Koboldt, Daniel C ^a   Larson, David E ^a   Wilson, Richard K ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Indels; Mutation detection; Next generation sequencing; Snvs; Trio calling; Variant calling; Varscan 2

Indexed keywords

ARTICLE; ARTIFACT; COPY NUMBER VARIATION; DATA ANALYSIS SOFTWARE; DIPLOIDY; DNA BASE COMPOSITION; DNA LIBRARY; EXOME; FALSE POSITIVE RESULT; FISHER EXACT TEST; GENE FREQUENCY; GENETIC CODE; GENETIC PROCEDURES; GENETIC VARIABILITY; GENOTYPE; HETEROZYGOTE; HUMAN; INDEL MUTATION; MUTATION RATE; MUTATIONAL ANALYSIS; PEDIGREE; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM; SOMATIC MUTATION; STRATEGIC PLANNING; GENETICS; GENOME; GERM CELL; METABOLISM; MUTATION; SOFTWARE;

GENOME; GERM CELLS; HUMANS; MUTATION; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 84896321422     PISSN: 19343396     EISSN: 1934340X     Source Type: Journal    
DOI: 10.1002/0471250953.bi1504s44     Document Type: Article

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