-
1
-
-
36448961540
-
Live imaging and genetic analysis of mouse notochord formation reveals regional morphogenetic mechanisms
-
Yamanaka, Y., Tamplin, O.J., Beckers, A., Gossler, A. & Rossant, J. Live imaging and genetic analysis of mouse notochord formation reveals regional morphogenetic mechanisms. Dev. Cell 13, 884-896 (2007
-
(2007)
Dev. Cell
, vol.13
, pp. 884-896
-
-
Yamanaka, Y.1
Tamplin, O.J.2
Beckers, A.3
Gossler, A.4
Rossant, J.5
-
2
-
-
53249133091
-
The endoderm of the mouse embryo arises by dynamic widespread intercalation of embryonic and extraembryonic lineages
-
Kwon, G.S., Viotti, M. & Hadjantonakis, A.K. The endoderm of the mouse embryo arises by dynamic widespread intercalation of embryonic and extraembryonic lineages. Dev. Cell 15, 509-520 (2008
-
(2008)
Dev. Cell
, vol.15
, pp. 509-520
-
-
Kwon, G.S.1
Viotti, M.2
Hadjantonakis, A.K.3
-
3
-
-
69549115070
-
Selective plane illumination microscopy techniques in developmental biology
-
Huisken, J. & Stainier, D.Y. Selective plane illumination microscopy techniques in developmental biology. Development 136, 1963-1975 (2009
-
(2009)
Development
, vol.136
, pp. 1963-1975
-
-
Huisken, J.1
Stainier, D.Y.2
-
4
-
-
82455220240
-
Shedding light on the system: Studying embryonic development with light-sheet microscopy
-
Tomer, R., Khairy, K. & Keller, P.J. Shedding light on the system: Studying embryonic development with light-sheet microscopy. Curr. Opin. Genet. Dev. 21, 558-565 (2011
-
(2011)
Curr. Opin. Genet. Dev
, vol.21
, pp. 558-565
-
-
Tomer, R.1
Khairy, K.2
Keller, P.J.3
-
5
-
-
79960150491
-
Reconstructing embryonic development
-
Khairy, K. & Keller, P.J. Reconstructing embryonic development. Genesis 49, 488-513 (2011
-
(2011)
Genesis
, vol.49
, pp. 488-513
-
-
Khairy, K.1
Keller, P.J.2
-
6
-
-
84870855300
-
Quantitative analysis of embryogenesis: A perspective for light-sheet microscopy
-
Hockendorf, B., Thumberger, T. & Wittbrodt, J. Quantitative analysis of embryogenesis: A perspective for light-sheet microscopy. Dev. Cell 23, 1111-1120 (2012
-
(2012)
Dev. Cell
, vol.23
, pp. 1111-1120
-
-
Hockendorf, B.1
Thumberger, T.2
Wittbrodt, J.3
-
7
-
-
84873500958
-
Light-sheet microscopy in cell biology
-
Tomer, R., Khairy, K. & Keller, P.J. Light-sheet microscopy in cell biology. Methods Mol. Biol. 931, 123-137 (2013
-
(2013)
Methods Mol. Biol
, vol.931
, pp. 123-137
-
-
Tomer, R.1
Khairy, K.2
Keller, P.J.3
-
8
-
-
77956288689
-
Digital scanned laser light-sheet fluorescence microscopy
-
doi:10.1101/pdb.top78
-
Keller, P.J. & Stelzer, E.H. Digital scanned laser light-sheet fluorescence microscopy. Cold Spring Harb. Protoc. 2010 doi:10.1101/pdb.top78 (2010
-
(2010)
Cold Spring Harb. Protoc
, vol.2010
-
-
Keller, P.J.1
Stelzer, E.H.2
-
9
-
-
56449123775
-
Reconstruction of zebrafish early embryonic development by scanned light-sheet microscopy
-
Keller, P.J., Schmidt, A.D., Wittbrodt, J. & Stelzer, E.H. Reconstruction of zebrafish early embryonic development by scanned light-sheet microscopy. Science 322, 1065-1069 (2008
-
(2008)
Science
, vol.322
, pp. 1065-1069
-
-
Keller, P.J.1
Schmidt, A.D.2
Wittbrodt, J.3
Stelzer, E.H.4
-
10
-
-
77955172060
-
Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy
-
Keller, P.J. et al. Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy. Nat. Methods 7, 637-642 (2010
-
(2010)
Nat. Methods
, vol.7
, pp. 637-642
-
-
Keller, P.J.1
-
11
-
-
80052298394
-
Deep and fast live imaging with two-photon scanned light-sheet microscopy
-
Truong, T.V., Supatto, W., Koos, D.S., Choi, J.M. & Fraser, S.E. Deep and fast live imaging with two-photon scanned light-sheet microscopy. Nat. Methods 8, 757-760 (2011
-
(2011)
Nat. Methods
, vol.8
, pp. 757-760
-
-
Truong, T.V.1
Supatto, W.2
Koos, D.S.3
Choi, J.M.4
Fraser, S.E.5
-
12
-
-
80055070317
-
Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans
-
Wu, Y. et al. Inverted selective plane illumination microscopy (iSPIM) enables coupled cell identity lineaging and neurodevelopmental imaging in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 108, 17708-17713 (2011
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 17708-17713
-
-
Wu, Y.1
-
13
-
-
78149368433
-
Optogenetic control of cardiac function
-
Arrenberg, A.B., Stainier, D.Y., Baier, H. & Huisken, J. Optogenetic control of cardiac function. Science 330, 971-974 (2010
-
(2010)
Science
, vol.330
, pp. 971-974
-
-
Arrenberg, A.B.1
Stainier, D.Y.2
Baier, H.3
Huisken, J.4
-
14
-
-
84879980720
-
Live imaging of whole mouse embryos during gastrulation: Migration analyses of epiblast and mesodermal cells
-
Ichikawa, T. et al. Live imaging of whole mouse embryos during gastrulation: Migration analyses of epiblast and mesodermal cells. PLoS ONE 8, e64506 (2013
-
(2013)
PLoS ONE
, vol.8
-
-
Ichikawa, T.1
-
15
-
-
1842420647
-
Nodal antagonists regulate formation of the anteroposterior axis of the mouse embryo
-
Yamamoto, M. et al. Nodal antagonists regulate formation of the anteroposterior axis of the mouse embryo. Nature 428, 387-392 (2004
-
(2004)
Nature
, vol.428
, pp. 387-392
-
-
Yamamoto, M.1
-
16
-
-
79960026099
-
Origin and role of distal visceral endoderm, a group of cells that determines anterior-posterior polarity of the mouse embryo
-
Takaoka, K., Yamamoto, M. & Hamada, H. Origin and role of distal visceral endoderm, a group of cells that determines anterior-posterior polarity of the mouse embryo. Nat. Cell Biol. 13, 743-752 (2011
-
(2011)
Nat. Cell Biol
, vol.13
, pp. 743-752
-
-
Takaoka, K.1
Yamamoto, M.2
Hamada, H.3
-
17
-
-
0030926093
-
The allocation of epiblast cells to the embryonic heart and other mesodermal lineages: The role of ingression and tissue movement during gastrulation
-
Tam, P.P., Parameswaran, M., Kinder, S.J. & Weinberger, R.P. The allocation of epiblast cells to the embryonic heart and other mesodermal lineages: The role of ingression and tissue movement during gastrulation. Development 124, 1631-1642 (1997
-
(1997)
Development
, vol.124
, pp. 1631-1642
-
-
Tam, P.P.1
Parameswaran, M.2
Kinder, S.J.3
Weinberger, R.P.4
-
18
-
-
0028836857
-
Neuroectodermal fate of epiblast cells in the distal region of the mouse egg cylinder: Implication for body plan organization during early embryogenesis
-
Quinlan, G.A., Williams, E.A., Tan, S.S. & Tam, P.P. Neuroectodermal fate of epiblast cells in the distal region of the mouse egg cylinder: Implication for body plan organization during early embryogenesis. Development 121, 87-98 (1995
-
(1995)
Development
, vol.121
, pp. 87-98
-
-
Quinlan, G.A.1
Williams, E.A.2
Tan, S.S.3
Tam, P.P.4
-
19
-
-
57149115955
-
Morphogenesis of the node and notochord: The cellular basis for the establishment and maintenance of left-right asymmetry in the mouse
-
Lee, J.D. & Anderson, K.V. Morphogenesis of the node and notochord: The cellular basis for the establishment and maintenance of left-right asymmetry in the mouse. Dev. Dyn. 237, 3464-3476 (2008
-
(2008)
Dev. Dyn
, vol.237
, pp. 3464-3476
-
-
Lee, J.D.1
Anderson, K.V.2
-
20
-
-
65649123873
-
Evidence for crucial role of hindgut expansion in directing proper migration of primordial germ cells in mouse early embryogenesis
-
Hara, K. et al. Evidence for crucial role of hindgut expansion in directing proper migration of primordial germ cells in mouse early embryogenesis. Dev. Biol. 330, 427-439 (2009
-
(2009)
Dev. Biol
, vol.330
, pp. 427-439
-
-
Hara, K.1
-
21
-
-
77952632195
-
Germ cell specification in mice: Signaling, transcription regulation, and epigenetic consequences
-
Saitou, M. & Yamaji, M. Germ cell specification in mice: Signaling, transcription regulation, and epigenetic consequences. Reproduction 139, 931-942 (2010
-
(2010)
Reproduction
, vol.139
, pp. 931-942
-
-
Saitou, M.1
Yamaji, M.2
-
22
-
-
0344758479
-
Mouse primordial germ cells lacking β1 integrins enter the germline but fail to migrate normally to the gonads
-
Anderson, R. et al. Mouse primordial germ cells lacking β1 integrins enter the germline but fail to migrate normally to the gonads. Development 126, 1655-1664 (1999
-
(1999)
Development
, vol.126
, pp. 1655-1664
-
-
Anderson, R.1
-
23
-
-
0034729910
-
Mechanisms of convergence and extension by cell intercalation
-
Keller, R. et al. Mechanisms of convergence and extension by cell intercalation. Philos. Trans. R Soc. Lond. B Biol. Sci. 355, 897-922 (2000
-
(2000)
Philos. Trans. R Soc. Lond. B Biol. Sci
, vol.355
, pp. 897-922
-
-
Keller, R.1
-
25
-
-
84865839326
-
Epithelial-mesenchymal transitions: Insights from development
-
Lim, J. & Thiery, J.P. Epithelial-mesenchymal transitions: Insights from development. Development 139, 3471-3486 (2012
-
(2012)
Development
, vol.139
, pp. 3471-3486
-
-
Lim, J.1
Thiery, J.P.2
-
26
-
-
84863195203
-
Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
-
Tomer, R., Khairy, K., Amat, F. & Keller, P.J. Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy. Nat. Methods 9, 755-763 (2012
-
(2012)
Nat. Methods
, vol.9
, pp. 755-763
-
-
Tomer, R.1
Khairy, K.2
Amat, F.3
Keller, P.J.4
-
27
-
-
0027487074
-
Isolation and culture of whole postimplantation embryos and germ layer derivatives
-
Sturm, K. & Tam, P.P. Isolation and culture of whole postimplantation embryos and germ layer derivatives. Methods Enzymol. 225, 164-190 (1993
-
(1993)
Methods Enzymol
, vol.225
, pp. 164-190
-
-
Sturm, K.1
Tam, P.P.2
-
28
-
-
79960128316
-
Establishment of conditional reporter mouse lines at ROSA26 locus for live cell imaging
-
Abe, T. et al. Establishment of conditional reporter mouse lines at ROSA26 locus for live cell imaging. Genesis 49, 579-590 (2011
-
(2011)
Genesis
, vol.49
, pp. 579-590
-
-
Abe, T.1
-
29
-
-
0031647592
-
A pyramid approach to subpixel registration based on intensity
-
Thevenaz, P., Ruttimann, U.E. & Unser, M. A pyramid approach to subpixel registration based on intensity. IEEE Trans. Image Process 7, 27-41 (1998
-
(1998)
IEEE Trans. Image Process
, vol.7
, pp. 27-41
-
-
Thevenaz, P.1
Ruttimann, U.E.2
Unser, M.3
-
30
-
-
78249261493
-
Array tomography: High-resolution three-dimensional immunofluorescence
-
2010 pdb top89
-
Micheva, K.D., O'Rourke, N., Busse, B. & Smith, S.J. Array tomography: High-resolution three-dimensional immunofluorescence. Cold Spring Harb. Protoc. 2010 pdb top89 (2010
-
(2010)
Cold Spring Harb. Protoc
-
-
Micheva, K.D.1
O'Rourke, N.2
Busse, B.3
Smith, S.J.4
-
31
-
-
0035384145
-
Quantitative evaluation of convolution-based methods for medical image interpolation
-
Meijering, E.H., Niessen, W.J. & Viergever, M.A. Quantitative evaluation of convolution-based methods for medical image interpolation. Med. Image Anal. 5, 111-126 (2001
-
(2001)
Med. Image Anal
, vol.5
, pp. 111-126
-
-
Meijering, E.H.1
Niessen, W.J.2
Viergever, M.A.3
-
32
-
-
84883237865
-
In vivo imaging of zebrafish embryogenesis
-
Keller, P.J. In vivo imaging of zebrafish embryogenesis. Methods 62, 268-278 (2013
-
(2013)
Methods
, vol.62
, pp. 268-278
-
-
Keller, P.J.1
-
33
-
-
84879693031
-
OpenSpinMicroscopy: An open-source integrated microscopy platform
-
Gualda, E.J. et al. OpenSpinMicroscopy: An open-source integrated microscopy platform. Nat. Methods 10, 599-600 (2013
-
(2013)
Nat. Methods
, vol.10
, pp. 599-600
-
-
Gualda, E.J.1
-
35
-
-
80355134438
-
Dissection of 6.5 dpc mouse embryos
-
doi:10.3791/160
-
Shea, K. & Geijsen, N. Dissection of 6.5 dpc mouse embryos. J. Vis. Exp. 160 doi:10.3791/160 (2007
-
(2007)
J. Vis. Exp
, vol.160
-
-
Shea, K.1
Geijsen, N.2
-
36
-
-
77954668315
-
Modification of mouse nodal flow by applying artificial flow
-
Nonaka, S. Modification of mouse nodal flow by applying artificial flow. Methods Cell Biol. 91, 287-297 (2009
-
(2009)
Methods Cell Biol
, vol.91
, pp. 287-297
-
-
Nonaka, S.1
|