Comparative proteomic analysis reveals the cross-talk between the responses induced by H2O2and by long-term rice black-streaked dwarf virus infection in rice

PLoS ONE

Volumn 8, Issue 11, 2013, Pages

  Xu, Qiufang ^a   Ni, Haiping ^a   Chen, Qingqing ^a   Sun, Feng ^a   Zhou, Tong ^a   Lan, Ying ^a   Zhou, Yijun ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

[No Author keywords available]

Indexed keywords

HYDROGEN PEROXIDE; VEGETABLE PROTEIN;

CYTOLOGY; GENETIC TRANSCRIPTION; METABOLISM; PHYSIOLOGICAL STRESS; PHYSIOLOGY; PROTEOMICS; REOVIRIDAE; RICE; TIME; VIROLOGY;

HYDROGEN PEROXIDE; ORYZA SATIVA; PLANT PROTEINS; PROTEOMICS; REOVIRIDAE; STRESS, PHYSIOLOGICAL; TIME FACTORS; TRANSCRIPTION, GENETIC;

EID: 84894274693     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0081640     Document Type: Article

References (52)

1. 2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79: 583-593. doi:10.1016/0092-8674(94)90544-4. PubMed: 7954825.
2. Wojtaszek P (1997) Oxidative burst: An early plant response to pathogen infection. Biochem J 322: 681-692. PubMed: 9148737.
3. Mehdy MC (1994) Active oxygen species in plant defense against pathogens. Plant Physiol 105: 467-472. PubMed: 12232215.
4. Grant JJ, Loake GJ (2000) Role of reactive oxygen intermediates and cognate redox signaling in disease resistance. Plant Physiol 124: 21-29. doi:10.1104/pp.124.1.21. PubMed: 10982418.
5. Alvarez ME, Pennell RI, Meijer PJ, Ishikawa A, Dixon RA et al. (1998) Reactive oxygen intermediates mediate a systemic signal network in the establishment of plant immunity. Cell 92: 773-784. doi:10.1016/S0092-8674(00) 81405-1. PubMed: 9529253.
6. Torres MA, Dangl JL (2005) Functions of the respiratory burst oxidase in biotic interactions, abiotic stress and development. Curr Opin Plant Biol 8: 397-403. doi:10.1016/j.pbi.2005.05.014. PubMed: 15939662.
7. Foyer CH, Noctor G (2005) Oxidant and antioxidant signalling in plants: a re-evaluation of the concept of oxidative stress in a physiological context. Plant Cell Environ 28: 1056-1071. doi:10.1111/j.1365-3040.2005.01327.x.
8. Mittler R, Vanderauwera S, Gollery M, Van Breusegem F (2004) Reactive oxygen gene network of plants. Trends Plant Sci 9: 490-498. doi:10.1016/j. tplants.2004.08.009. PubMed: 15465684.
9. Miller G, Suzuki N, Ciftci-Yilmaz S, Mittler R (2010) Reactive oxygen species homeostasis and signalling during drought and salinity stresses. Plant Cell Environ 33: 453-467. doi:10.1111/j.1365-3040.2009.02041.x. PubMed: 19712065.
10. 2 suppresses necrotic disease symptoms. Phytopathology 102: 848-856. doi:10.1094/PHYTO-01-12-0012-R. PubMed: 22646244.
11. Hao ZN, Wang LP, He YP, Liang JG, Tao RX (2011) Expression of defense genes and activities of antioxidant enzymes in rice resistance to rice stripe virus and small brown planthopper. Plant Physiol Biochem 49: 744-751. doi:10.1016/j.plaphy.2011.01.014. PubMed: 21300551.
12. Riedle-Bauer M (2000) Role of reactive oxygen species and antioxidant enzymes in systemic virus infections of plants. J Phytopathol 148: 297-302. doi:10.1046/j.1439-0434.2000.00503.x.
13. Díaz-Vivancos P, Clemente-Moreno MJ, Rubio M, Olmos E, García JA et al. (2008) Alteration in the chloroplastic metabolism leads to ROS accumulation in pea plants in response to plum pox virus. J Exp Bot 59: 2147-2160. doi:10.1093/jxb/ern082. PubMed: 18535298.
14. Diaz-Vivancos P, Rubio M, Mesonero V, Periago PM, Barceló AR et al. (2006) The apoplastic antioxidant system in Prunus: response to longterm plum pox virus infection. J Exp Bot 57: 3813-3824. doi:10.1093/jxb/erl138. PubMed: 17043083.
15. Zhang HM, Chen JP, Lei JL, Adams MJ (2001) Sequence analysis shows that a dwarfing disease on rice, wheat and maize in China is caused by rice black-streaked dwarf virus. Eur J Plant Pathol 107: 563-567. doi:10.1023/A:1011204010663.
16. Bai FW, Yan J, Qu ZC, Zhang HW, Xu J et al. (2002) Phylogenetic analysis reveals that a dwarfing disease on different cereal crops in China is due to rice black streaked dwarf virus (RBSDV). Virus Genes 25: 201-206. doi:10.1023/A:1020170020581. PubMed: 12416683.
17. Wang HD, Chen JP, Wang AG, Jiang XH, Adams MJ (2009) Studies on the epidemiology and yield losses from rice black-streaked dwarf disease in a recent epidemic in Zhejiang province, China. Plant Pathol 58: 815-825. doi:10.1111/j.1365-3059.2009.02091.x.
18. Hibino H (1996) Biology and epidemiology of rice viruses. Annu Rev Phytopathol 34: 249-274. doi:10.1146/annurev.phyto.34.1.249. PubMed: 15012543.
19. Shikata E, Kitagawa Y (1977) Rice black-streaked dwarf virus - Its properties, morphology and Intracellular-localization. Virology 77: 826-842. doi:10.1016/0042-6822(77)90502-5. PubMed: 855190.
20. Isogai M, Uyeda I, Lee BC (1998) Detection and assignment of proteins encoded by rice black streaked dwarf fijivirus S7, S8, S9 and S10. J Gen Virol 79: 1487-1494. PubMed: 9634092.
21. Jia MA, Li YQ, Lei L, Di DP, Miao HQ et al. (2012) Alteration of gene expression profile in maize infected with a double-stranded RNA fijivirus associated with symptom development. Mol Plant Pathol 13: 251-262. doi:10.1111/j.1364-3703.2011.00743.x. PubMed: 21955602.
22. Li KP, Xu CZ, Zhang JR (2011) Proteome profile of maize (Zea Mays L.) leaf tissue at the flowering stage after long-term adjustment to rice black-streaked dwarf virus infection. Gene 485: 106-113. doi:10.1016/j.gene. 2011.06.016. PubMed: 21708230.
23. Lu Y, Yang J, Zhang HM, Chen JP (2012) Screening of rice gene fragments interacted with p5b of rice black-streaked dwarf virus (in Chinese). Chin J Rice Sci 26: 34-41.
24. Xiao DL, Deng H, Xie LY, Wu ZJ, Xie LH (2010) Screening of rice proteins interacting with P6 of Rice black streaked dwarf virus from rice cDNA library by yeast two hybrid system (in Chinese). Chi J Trop Crops 31: 435-439.
25. Wan XY, Liu JY (2008) Comparative proteomics analysis reveals an intimate protein network provoked by hydrogen peroxide stress in rice seedling leaves. Mol Cell Proteomics 7: 1469-1488. doi:10.1074/mcp.M700488-MCP200. PubMed: 18407957.
26. Li L, Li HW, Dong HB, Wang XF, Zhou GH (2011) Transmission by Laodelphax striatellus Fallen of Rice black-streaked dwarf virus from frozen infected rice leaves to healthy plants of rice and maize. J Phytopathol 159: 1-5. doi:10.1111/j.1439-0434.2010.01713.x.
27. Ji YH, Gao RZ, Zhang Y, Cheng ZB, Zhou T et al. (2011) A simplified method for quich detection of Rice black- streaked dwarf virus and Southern rice black-streaked dwarf virus (in Chinese). Chin J Rice Sci 25: 91-94.
28. Damerval C, Devienne D, Zivy M, Thiellement H (1986) Technical improvements in two-dimensional electrophoresis increase the level of genetic-variation detected in wheat-seedling proteins. Electrophoresis 7: 52-54. doi:10.1002/elps.1150070108.
29. Xu QF, Cheng WS, Li SS, Li W, Zhang ZX et al. (2012) Identification of genes required for Cf-dependent hypersensitive cell death by combined proteomic and RNA interfering analyses. J Exp Bot 63: 2421-2435. doi:10.1093/jxb/err397. PubMed: 22275387.
30. Candiano G, Bruschi M, Musante L, Santucci L, Ghiggeri GM et al. (2004) Blue silver: A very sensitive colloidal Coomassie G-250 staining for proteome analysis. Electrophoresis 25: 1327-1333. doi:10.1002/elps.200305844. PubMed: 15174055.
31. Meisrimler CN, Planchon S, Renaut J, Sergeant K, Lüthje S (2011) Alteration of plasma membrane-bound redox systems of iron deficient pea roots by chitosan. J Proteomics 74: 1437-1449. doi:10.1016/j.jprot.2011.01.012. PubMed: 21310270.
32. Ma H, Song L, Shu Y, Wang S, Niu J et al. (2012) Comparative proteomic analysis of seedling leaves of different salt tolerant soybean genotypes. J Proteomics 75: 1529-1546. doi:10.1016/j.jprot.2011.11.026. PubMed: 22155470.
33. Hashimoto M, Komatsu S (2007) Proteomic analysis of rice seedlings during cold stress. Proteomics 7: 1293-1302. doi:10.1002/pmic.200600921. PubMed: 17380535.
34. Neilson KA, Mariani M, Haynes PA (2011) Quantitative proteomic analysis of cold-responsive proteins in rice. Proteomics 11: 1696-1706. doi:10.1002/pmic.201000727. PubMed: 21433000.
35. Møller IM, Jensen PE, Hansson A (2007) Oxidative modifications to cellular components in plants. Annu Rev Plant Biol 58: 459-481. doi:10.1146/annurev.arplant.58.032806.103946. PubMed: 17288534.
36. Mittler R (2002) Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci 7: 405-410. doi:10.1016/S1360-1385(02)02312-9. PubMed: 12234732.
37. Li ZH, Guo XQ, Ye BH, Guo YK (2002) Ultrantructural alteration of maize plants infected with the maize rough dwarf virus (in Chinese). Agri Sci China 1: 531-534.
38. Showalter AM, Keppler B, Lichtenberg J, Gu D, Welch LR (2010) A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins. Plant Physiol 153: 485-513. doi:10.1104/pp.110.156554. PubMed: 20395450.
39. De Cnodder T, Vissenberg K, Van Der Straeten D, Verbelen JP (2005) Regulation of cell length in the Arabidopsis thaliana root by the ethylene precursor 1-aminocyclopropane- 1-carboxylic acid: a matter of apoplastic reactions. New Phytol 168: 541-550. doi:10.1111/j.1469-8137.2005.01540.x. PubMed: 16313637.
40. Ren P, Chen D, Cao KQ, Lu YG, Miao HQ (2009) Histological study on maize infected with rice black-streaked dwarf fijivirus (in Chinese). J Heibei Agri Univer 32: 89-100.
41. Umate P (2010) Genome-wide analysis of the family of light-harvesting chlorophyll a/b-binding proteins in Arabidopsis and rice. Plant Signal Behav 5: 1537-1542. doi:10.4161/psb.5.12.13410. PubMed: 21512324.
42. Yang DH, Paulsen H, Andersson B (2000) The N-terminal domain of the light-harvesting chlorophyll a/b-binding protein complex (LHCII) is essential for its acclimative proteolysis. Febs Lett 466: 385-388. doi:10.1016/S0014- 5793(00)01107-8. PubMed: 10682866.
43. Salvucci ME, Ogren WL (1996) The mechanism of Rubisco activase: Insights from studies of the properties and structure of the enzyme. Photosynth Res 47: 1-11. doi:10.1007/BF00017748.
44. Avilan L, Lebreton S, Gontero B (2000) Thioredoxin activation of phosphoribulokinase in a bi-enzyme complex from Chlamydomonas reinhardtii chloroplasts. J Biol Chem 275: 9447-9451. doi:10.1074/jbc.275.13.9447. PubMed: 10734091.
45. Guo DP, Guo YP, Zhao JP, Liu H, Peng Y et al. (2005) Photosynthetic rate and chlorophyll fluorescence in leaves of stem mustard (Brassica juncea var. tsatsai) after turnip mosaic virus infection. Plant Sci 168: 57-63. doi:10.1016/j.plantsci.2004.07.019.
46. Synkova H, Semoradova S, Schnablova R, Muller K, Pospisilova J et al. (2006) Effects of biotic stress caused by Potato virus Y on photosynthesis in ipt transgenic and control Nicotiana tabacum L. Plant Sci 171: 607-616. doi:10.1016/j.plantsci.2006.06.002.
47. Teixeira FK, Menezes-Benavente L, Galvão VC, Margis R, Margis-Pinheiro M (2006) Rice ascorbate peroxidase gene family encodes functionally diverse isoforms localized in different subcellular compartments. Planta 224: 300-314. doi:10.1007/s00425-005-0214-8. PubMed: 16397796.
48. Dixon DP, Lapthorn A, Edwards R (2002) Plant glutathione transferases. Genome Biol 3: 3004: 3001-3010.
49. Gilbert HF (1997) Protein disulfide isomerase and assisted protein folding. J Biol Chem 272: 29399-29402. doi:10.1074/jbc.272.47.29399. PubMed: 9367991.
50. Odanaka S, Bennett AB, Kanayama Y (2002) Distinct physiological roles of fructokinase isozymes revealed by gene-specific suppression of Frk1 and Frk2 expression in tomato. Plant Physiol 129: 1119-1126. doi:10.1104/pp.000703. PubMed: 12114566.
51. Kleczkowski LA (1994) Glucose activation and metabolism through udp-glucose pyrophosphorylase in plants. Phytochemistry 37: 1507-1515. doi:10.1016/S0031-9422(00)89568-0.
52. Glisovic T, Bachorik JL, Yong J, Dreyfuss G (2008) RNA-binding proteins and post-transcriptional gene regulation. FEBS Lett 582: 1977-1986. doi:10.1016/j.febslet.2008.03.004. PubMed: 18342629.