Hardware acceleration for the banded Smith-Waterman algorithm with the cycled systolic array

FPT 2013 - Proceedings of the 2013 International Conference on Field Programmable Technology

Volumn , Issue , 2013, Pages 480-481

  Chen, Peng ^a   Wang, Chao ^a   Li, Xi ^a   Zhou, Xuehai ^a  

^a UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA   (China)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84894211286     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/FPT.2013.6718421     Document Type: Conference Paper

References (10)

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3. P. Chen, Wang C., Li X., et al., A FPGA-based high performance acceleration platform for the Next Generation long read mapping, The 15th IEEE International Conference on High Performance Computing and Communications. Zhangjiajie, China, November 13-15, 2013
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8. T. Oliver, B. Schmidt, and D. Maskell, Hyper customized processors for bio-sequence database scanning on FPGAs, in Proceedings of the ACM/SIGDA 13th international symposium on Field-programmable gate arrays, ACM: Monterey, California, USA. p. 229-237.
9. C.B. Olson, M. Kim, C. Clauson, et al. Hardware Acceleration of Short Read Mapping. in 2012 IEEE 20th International Symposium on Field-Programmable Custom Computing Machines. 2012.
10. B. Harris, A.C. Jacob, J.M. Lancaster, et al., A Banded Smith-Waterman FPGA Accelerator for Mercury BLASTP. in Proc. FPL, 2007: P. 765-769.