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Volumn 8, Issue 11, 2013, Pages

Novel virus discovery and genome reconstruction from field rna samples reveals highly divergent viruses in dipteran hosts

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALS; BASE SEQUENCE; CODON; CULICIDAE; DIPTERA; ENTOMOBIRNAVIRUS; FRAMESHIFT MUTATION; GENOME, VIRAL; INSECT VIRUSES; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; READING FRAMES; REPRODUCIBILITY OF RESULTS; RNA, VIRAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; UNTRANSLATED REGIONS;

EID: 84894093980     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0080720     Document Type: Article
Times cited : (118)

References (77)
  • 1
    • 80053370586 scopus 로고    scopus 로고
    • Exploring the viral world through metagenomics
    • doi:10.1016/j.coviro.2011.06.004. PubMed: 22440785
    • Rosario K, Breitbart M (2011) Exploring the viral world through metagenomics. Curr Opin Virol 1: 289-297. doi:10.1016/j.coviro.2011.06.004. PubMed: 22440785.
    • (2011) Curr Opin Virol , vol.1 , pp. 289-297
    • Rosario, K.1    Breitbart, M.2
  • 2
    • 0038275943 scopus 로고    scopus 로고
    • Genetic and phenotypic characterization of the newly described insect flavivirus, Kamiti River virus
    • DOI 10.1007/s00705-003-0019-7
    • Crabtree MB, Sang RC, Stollar V, Dunster LM, Miller BR (2003) Genetic and phenotypic characterization of the newly described insect flavivirus, Kamiti River virus. Arch Virol 148: 1095-1118. doi:10.1007/s00705-003-0019-7. PubMed: 12756617. (Pubitemid 36720307)
    • (2003) Archives of Virology , vol.148 , Issue.6 , pp. 1095-1118
    • Crabtree, M.B.1    Sang, R.C.2    Stollar, V.3    Dunster, L.M.4    Miller, B.R.5
  • 3
    • 0037938716 scopus 로고    scopus 로고
    • Isolation of a new flavivirus related to Cell fusing agent virus (CFAV) from field-collected flood-water Aedes mosquitoes sampled from a dambo in central Kenya
    • DOI 10.1007/s00705-003-0018-8
    • Sang RC, Gichogo A, Gachoya J, Dunster MD, Ofula V et al. (2003) Isolation of a new flavivirus related to cell fusing agent virus (CFAV) from field-collected flood-water Aedes mosquitoes sampled from a dambo in central Kenya. Arch Virol 148: 1085-1093. doi:10.1007/s00705-003-0018-8. PubMed: 12756616. (Pubitemid 36720306)
    • (2003) Archives of Virology , vol.148 , Issue.6 , pp. 1085-1093
    • Sang, R.C.1    Gichogo, A.2    Gachoya, J.3    Dunster, M.D.4    Ofula, V.5    Hunt, A.R.6    Crabtree, M.B.7    Miller, B.R.8    Dunster, L.M.9
  • 4
    • 33645541826 scopus 로고    scopus 로고
    • Isolation of a new strain of the flavivirus cell fusing agent virus in a natural mosquito population from Puerto Rico
    • doi:10.1099/vir.0.81475-0. PubMed: 16528021
    • Cook S, Bennett SN, Holmes EC, De Chesse R, Moureau G et al. (2006) Isolation of a new strain of the flavivirus cell fusing agent virus in a natural mosquito population from Puerto Rico. J Gen Virol 87: 735-748. doi:10.1099/vir.0.81475-0. PubMed: 16528021.
    • (2006) J Gen Virol , vol.87 , pp. 735-748
    • Cook, S.1    Bennett, S.N.2    Holmes, E.C.3    De Chesse, R.4    Moureau, G.5
  • 5
    • 84855914415 scopus 로고    scopus 로고
    • Molecular evolution of the insect-specific flaviviruses
    • doi:10.1099/vir.0.036525-0. PubMed: 22012464
    • Cook S, Moureau G, Kitchen A, Gould EA, de Lamballerie X et al. (2012) Molecular evolution of the insect-specific flaviviruses. J Gen Virol 93: 223-234. doi:10.1099/vir.0.036525-0. PubMed: 22012464.
    • (2012) J Gen Virol , vol.93 , pp. 223-234
    • Cook, S.1    Moureau, G.2    Kitchen, A.3    Gould, E.A.4    De Lamballerie, X.5
  • 6
    • 84869217579 scopus 로고    scopus 로고
    • Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta)
    • doi:10.1099/vir.0.045948-0. PubMed: 22915694
    • Rosario K, Dayaram A, Marinov M, Ware J, Kraberger S et al. (2012) Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta). J Gen Virol 93: 2668-2681. doi:10.1099/vir.0.045948-0. PubMed: 22915694.
    • (2012) J Gen Virol , vol.93 , pp. 2668-2681
    • Rosario, K.1    Dayaram, A.2    Marinov, M.3    Ware, J.4    Kraberger, S.5
  • 7
    • 84882928633 scopus 로고    scopus 로고
    • Virus discovery and recent insights into virus diversity in arthropods
    • [Epub ahead of print]. PubMed: 23850098
    • Junglen S, Drosten C (2013) Virus discovery and recent insights into virus diversity in arthropods. Curr Opin Microbiol [Epub ahead of print]. PubMed: 23850098.
    • (2013) Curr Opin Microbiol
    • Junglen, S.1    Drosten, C.2
  • 8
    • 79958145122 scopus 로고    scopus 로고
    • Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes
    • doi:10.1371/journal.pone.0020579. PubMed: 21674005
    • Ng TF, Willner DL, Lim YW, Schmieder R, Chau B et al. (2011) Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes. PLOS ONE 6: e20579. doi:10.1371/journal.pone.0020579. PubMed: 21674005.
    • (2011) PLOS ONE , vol.6
    • Ng, T.F.1    Willner, D.L.2    Lim, Y.W.3    Schmieder, R.4    Chau, B.5
  • 9
    • 80054981858 scopus 로고    scopus 로고
    • Next generation sequencing technologies for insect virus discovery
    • doi:10.3390/v3101849. PubMed: 22069519
    • Liu S, Vijayendran D, Bonning BC (2011) Next generation sequencing technologies for insect virus discovery. Viruses 3: 1849-1869. doi:10.3390/v3101849. PubMed: 22069519.
    • (2011) Viruses , vol.3 , pp. 1849-1869
    • Liu, S.1    Vijayendran, D.2    Bonning, B.C.3
  • 10
    • 53349121971 scopus 로고    scopus 로고
    • Mechanism of Induction and Suppression of Antiviral Immunity Directed by Virus-Derived Small RNAs in Drosophila
    • doi:10.1016/j.chom.2008.09.001. PubMed: 18854242
    • Aliyari R, Wu Q, Li HW, Wang XH, Li F et al. (2008) Mechanism of Induction and Suppression of Antiviral Immunity Directed by Virus-Derived Small RNAs in Drosophila. Cell Host Microbe 4: 387-397. doi:10.1016/j.chom.2008.09. 001. PubMed: 18854242.
    • (2008) Cell Host Microbe , vol.4 , pp. 387-397
    • Aliyari, R.1    Wu, Q.2    Li, H.W.3    Wang, X.H.4    Li, F.5
  • 11
    • 70049106407 scopus 로고    scopus 로고
    • RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification
    • PubMed: 19578437
    • Brackney DE, Beane JE, Ebel GD (2009) RNAi targeting of West Nile virus in mosquito midguts promotes virus diversification. PLOS Pathog 5: e1000502. PubMed: 19578437.
    • (2009) PLOS Pathog , vol.5
    • Brackney, D.E.1    Beane, J.E.2    Ebel, G.D.3
  • 12
    • 58149399344 scopus 로고    scopus 로고
    • Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes
    • doi:10.1073/pnas.0803408105. PubMed: 19047642
    • Myles KM, Wiley MR, Morazzani EM, Adelman ZN (2008) Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes. Proc Natl Acad Sci U S A 105: 19938-19943. doi:10.1073/pnas.0803408105. PubMed: 19047642.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 19938-19943
    • Myles, K.M.1    Wiley, M.R.2    Morazzani, E.M.3    Adelman, Z.N.4
  • 13
    • 61449132473 scopus 로고    scopus 로고
    • Dengue virus type 2 infections of Aedes aegypti are modulated by the mosquito's RNA interference pathway
    • PubMed: 19214215
    • Sánchez-Vargas I, Scott JC, Poole-Smith BK, Franz AWE, Barbosa-Solomieu V et al. (2009) Dengue virus type 2 infections of Aedes aegypti are modulated by the mosquito's RNA interference pathway. PLOS Pathog 5: e1000299. PubMed: 19214215.
    • (2009) PLOS Pathog , vol.5
    • Sánchez-Vargas, I.1    Scott, J.C.2    Poole-Smith, B.K.3    Franz, A.W.E.4    Barbosa-Solomieu, V.5
  • 16
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • DOI 10.1101/gr.074492.107
    • Zerbino DR, Birney E (2008) Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 18: 821-829. doi:10.1101/gr.074492. 107. PubMed: 18349386. (Pubitemid 351645072)
    • (2008) Genome Research , vol.18 , Issue.5 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 17
    • 0025183708 scopus 로고
    • Basic local alignment search tool
    • doi:10.1016/S0022-2836(05)80360-2. PubMed: 2231712
    • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410. doi:10.1016/S0022-2836(05)80360- 2. PubMed: 2231712.
    • (1990) J Mol Biol , vol.215 , pp. 403-410
    • Altschul, S.F.1    Gish, W.2    Miller, W.3    Myers, E.W.4    Lipman, D.J.5
  • 18
    • 74049108922 scopus 로고    scopus 로고
    • BLAST+: Architecture and applications
    • doi:10.1186/1471-2105-10-421. PubMed: 20003500
    • Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J et al. (2009) BLAST+: architecture and applications. BMC Bioinformatics 10: 421. doi:10.1186/1471-2105-10-421. PubMed: 20003500.
    • (2009) BMC Bioinformatics , vol.10 , pp. 421
    • Camacho, C.1    Coulouris, G.2    Avagyan, V.3    Ma, N.4    Papadopoulos, J.5
  • 19
    • 84859768479 scopus 로고    scopus 로고
    • Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels
    • doi:10.1093/bioinformatics/bts094. PubMed: 22368243
    • Schulz MH, Zerbino DR, Vingron M, Birney E (2012) Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics 28: 1086-1092. doi:10.1093/bioinformatics/bts094. PubMed: 22368243.
    • (2012) Bioinformatics , vol.28 , pp. 1086-1092
    • Schulz, M.H.1    Zerbino, D.R.2    Vingron, M.3    Birney, E.4
  • 20
    • 84883227372 scopus 로고    scopus 로고
    • PRICE: Software for the targeted assembly of components of (meta)genomic sequence data
    • Bethesda
    • Ruby JG, Bellare P, DeRisi JL (2013) PRICE: software for the targeted assembly of components of (meta)genomic sequence data. G3 (Bethesda) 3: 865-880
    • (2013) G3 , vol.3 , pp. 865-880
    • Ruby, J.G.1    Bellare, P.2    DeRisi, J.L.3
  • 21
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • doi:10.1093/nar/gkh340. PubMed: 15034147
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797. doi:10.1093/nar/gkh340. PubMed: 15034147.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 22
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
    • DOI 10.1080/10635150701472164, PII 780704285
    • Talavera G, Castresana J (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol 56: 564-577. doi:10.1080/10635150701472164. PubMed: 17654362. (Pubitemid 47171631)
    • (2007) Systematic Biology , vol.56 , Issue.4 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 23
    • 34249857539 scopus 로고    scopus 로고
    • COBALT: Constraint-based alignment tool for multiple protein sequences
    • DOI 10.1093/bioinformatics/btm076
    • Papadopoulos JS, Agarwala R (2007) COBALT: constraint-based alignment tool for multiple protein sequences. Bioinformatics 23: 1073-1079. doi:10.1093/bioinformatics/btm076. PubMed: 17332019. (Pubitemid 47050558)
    • (2007) Bioinformatics , vol.23 , Issue.9 , pp. 1073-1079
    • Papadopoulos, J.S.1    Agarwala, R.2
  • 26
    • 80055074497 scopus 로고    scopus 로고
    • Stimulation of stop codon readthrough: Frequent presence of an extended 3′ RNA structural element
    • doi:10.1093/nar/gkr224. PubMed: 21525127
    • Firth AE, Wills NM, Gesteland RF, Atkins JF (2011) Stimulation of stop codon readthrough: frequent presence of an extended 3′ RNA structural element. Nucleic Acids Res 39: 6679-6691. doi:10.1093/nar/gkr224. PubMed: 21525127.
    • (2011) Nucleic Acids Res , vol.39 , pp. 6679-6691
    • Firth, A.E.1    Wills, N.M.2    Gesteland, R.F.3    Atkins, J.F.4
  • 27
    • 84867904673 scopus 로고    scopus 로고
    • Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein
    • doi:10.1073/pnas.1211145109. PubMed: 23043113
    • Fang Y, Treffers EE, Li Y, Tas A, Sun Z et al. (2012) Efficient -2 frameshifting by mammalian ribosomes to synthesize an additional arterivirus protein. Proc Natl Acad Sci U S A 109: E2920-E2928. doi:10.1073/pnas.1211145109. PubMed: 23043113.
    • (2012) Proc Natl Acad Sci U S A , vol.109
    • Fang, Y.1    Treffers, E.E.2    Li, Y.3    Tas, A.4    Sun, Z.5
  • 28
    • 39149123804 scopus 로고    scopus 로고
    • Molecular characterisation and phylogenetic analysis of Chronic bee paralysis virus, a honey bee virus
    • doi:10.1016/j.virusres.2007.10.014. PubMed: 18079012
    • Olivier V, Blanchard P, Chaouch S, Lallemand P, Schurr F et al. (2008) Molecular characterisation and phylogenetic analysis of Chronic bee paralysis virus, a honey bee virus. Virus Res 132: 59-68. doi:10.1016/j.virusres.2007.10. 014. PubMed: 18079012.
    • (2008) Virus Res , vol.132 , pp. 59-68
    • Olivier, V.1    Blanchard, P.2    Chaouch, S.3    Lallemand, P.4    Schurr, F.5
  • 29
    • 73749085739 scopus 로고    scopus 로고
    • Chronic bee paralysis: A disease and a virus like no other?
    • doi:10.1016/j.jip.2009.06.013. PubMed: 19909978
    • Ribière M, Olivier V, Blanchard P (2010) Chronic bee paralysis: a disease and a virus like no other? J Invertebr Pathol 103: S120-S131. doi:10.1016/j.jip.2009.06.013. PubMed: 19909978.
    • (2010) J Invertebr Pathol , vol.103
    • Ribière, M.1    Olivier, V.2    Blanchard, P.3
  • 30
    • 79958172988 scopus 로고    scopus 로고
    • Temporal analysis of the honey bee microbiome reveals four novel viruses and seasonal prevalence of known viruses, Nosema, and Crithidia
    • doi:10.1371/journal.pone.0020656. PubMed: 21687739
    • Runckel C, Flenniken ML, Engel JC, Ruby JG, Ganem D et al. (2011) Temporal analysis of the honey bee microbiome reveals four novel viruses and seasonal prevalence of known viruses, Nosema, and Crithidia. PLOS ONE 6: e20656. doi:10.1371/journal.pone.0020656. PubMed: 21687739.
    • (2011) PLOS ONE , vol.6
    • Runckel, C.1    Flenniken, M.L.2    Engel, J.C.3    Ruby, J.G.4    Ganem, D.5
  • 31
    • 23144452044 scopus 로고    scopus 로고
    • The HHpred interactive server for protein homology detection and structure prediction
    • DOI 10.1093/nar/gki408
    • Söding J, Biegert A, Lupas AN (2005) The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Res 33: W244-W248. doi:10.1093/nar/gki162. PubMed: 15980461. (Pubitemid 44529917)
    • (2005) Nucleic Acids Research , vol.33 , Issue.WEB. SERV. ISS.
    • Soding, J.1    Biegert, A.2    Lupas, A.N.3
  • 32
    • 84877747839 scopus 로고    scopus 로고
    • Ribosomal frameshifting used in influenza A virus expression occurs within the sequence UCC-UUU-CGU and is in the +1 direction
    • PubMed: 23155484
    • Firth AE, Jagger BW, Wise HM, Nelson CC, Parsawar K et al. (2012) Ribosomal frameshifting used in influenza A virus expression occurs within the sequence UCC-UUU-CGU and is in the +1 direction. Open Biol 2: 120109. PubMed: 23155484.
    • (2012) Open Biol , vol.2 , pp. 120109
    • Firth, A.E.1    Jagger, B.W.2    Wise, H.M.3    Nelson, C.C.4    Parsawar, K.5
  • 33
    • 0030589032 scopus 로고    scopus 로고
    • Sequence analysis of the bicistronic drosophila X virus genome segment A and its encoded polypeptide
    • DOI 10.1006/viro.1996.0610
    • Chung HK, Kordyban S, Cameron L, Dobos P (1996) Sequence analysis of the bicistronic Drosophila X virus genome segment A and its encoded polypeptides. Virology 225: 359-368. doi:10.1006/viro.1996.0610. PubMed: 8918922. (Pubitemid 26392257)
    • (1996) Virology , vol.225 , Issue.2 , pp. 359-368
    • Chung, H.K.1    Kordyban, S.2    Cameron, L.3    Dobos, P.4
  • 34
    • 0036292205 scopus 로고    scopus 로고
    • Birnavirus VP1 proteins form a distinct subgroup of RNA-dependent RNA polymerases lacking a GDD motif1
    • DOI 10.1006/viro.2001.1334
    • Shwed PS, Dobos P, Cameron LA, Vakharia VN, Duncan R (2002) Birnavirus VP1 proteins form a distinct subgroup of RNA-dependent RNA polymerases lacking a GDD motif. Virology 296: 241-250. doi:10.1006/viro.2001.1334. PubMed: 12069523. (Pubitemid 34713264)
    • (2002) Virology , vol.296 , Issue.2 , pp. 241-250
    • Shwed, P.S.1    Dobos, P.2    Cameron, L.A.3    Vakharia, V.N.4    Duncan, R.5
  • 35
    • 84863407832 scopus 로고    scopus 로고
    • Espirito Santo virus: A new birnavirus that replicates in insect cells
    • doi:10.1128/JVI.06614-11. PubMed: 22171264
    • Vancini R, Paredes A, Ribeiro M, Blackburn K, Ferreira D et al. (2012) Espirito Santo virus: a new birnavirus that replicates in insect cells. J Virol 86: 2390-2399. doi:10.1128/JVI.06614-11. PubMed: 22171264.
    • (2012) J Virol , vol.86 , pp. 2390-2399
    • Vancini, R.1    Paredes, A.2    Ribeiro, M.3    Blackburn, K.4    Ferreira, D.5
  • 36
    • 84867548416 scopus 로고    scopus 로고
    • First isolation of an Entomobirnavirus from free-living insects
    • doi:10.1099/vir.0.045435-0. PubMed: 22875257
    • Marklewitz M, Gloza-Rausch F, Kurth A, Kümmerer BM, Drosten C et al. (2012) First isolation of an Entomobirnavirus from free-living insects. J Gen Virol 93: 2431-2435. doi:10.1099/vir.0.045435-0. PubMed: 22875257.
    • (2012) J Gen Virol , vol.93 , pp. 2431-2435
    • Marklewitz, M.1    Gloza-Rausch, F.2    Kurth, A.3    Kümmerer, B.M.4    Drosten, C.5
  • 37
    • 84874036458 scopus 로고    scopus 로고
    • Presence of entomobirnaviruses in Chinese mosquitoes in the absence of dengue virus co-infection
    • doi:10.1099/vir.0.048231-0. PubMed: 23175239
    • Huang Y, Mi Z, Zhuang L, Ma M, An X et al. (2013) Presence of entomobirnaviruses in Chinese mosquitoes in the absence of dengue virus co-infection. J Gen Virol 94: 663-667. doi:10.1099/vir.0.048231-0. PubMed: 23175239.
    • (2013) J Gen Virol , vol.94 , pp. 663-667
    • Huang, Y.1    Mi, Z.2    Zhuang, L.3    Ma, M.4    An, X.5
  • 38
    • 0026758711 scopus 로고
    • Mutational analysis of the "slippery-sequence" component of a coronavirus ribosomal frameshifting signal
    • doi:10.1016/0022-2836(92)90901-U. PubMed: 1404364
    • Brierley I, Jenner AJ, Inglis SC (1992) Mutational analysis of the "slippery-sequence" component of a coronavirus ribosomal frameshifting signal. J Mol Biol 227: 463-479. doi:10.1016/0022-2836(92)90901-U. PubMed: 1404364.
    • (1992) J Mol Biol , vol.227 , pp. 463-479
    • Brierley, I.1    Jenner, A.J.2    Inglis, S.C.3
  • 39
    • 84862642115 scopus 로고    scopus 로고
    • Non-canonical translation in RNA viruses
    • doi:10.1099/vir.0.042499-0. PubMed:22535777
    • Firth AE, Brierley I (2012) Non-canonical translation in RNA viruses. J Gen Virol 93: 1385-1409. doi:10.1099/vir.0.042499-0. PubMed:22535777.
    • (2012) J Gen Virol , vol.93 , pp. 1385-1409
    • Firth, A.E.1    Brierley, I.2
  • 40
    • 77049090444 scopus 로고    scopus 로고
    • Evidence for ribosomal frameshifting and a novel overlapping gene in the genomes of insect-specific flaviviruses
    • doi:10.1016/j.virol.2009.12.033. PubMed: 20097399
    • Firth AE, Blitvich BJ, Wills NM, Miller CL, Atkins JF (2010) Evidence for ribosomal frameshifting and a novel overlapping gene in the genomes of insect-specific flaviviruses. Virology 399: 153-166. doi:10.1016/j.virol.2009. 12.033. PubMed: 20097399.
    • (2010) Virology , vol.399 , pp. 153-166
    • Firth, A.E.1    Blitvich, B.J.2    Wills, N.M.3    Miller, C.L.4    Atkins, J.F.5
  • 41
    • 69449108763 scopus 로고    scopus 로고
    • Characterization of a novel flavivirus from mosquitoes in northern europe that is related to mosquito-borne flaviviruses of the tropics
    • doi:10.1128/JVI.00529-09. PubMed: 19570865
    • Huhtamo E, Putkuri N, Kurkela S, Manni T, Vaheri A et al. (2009) Characterization of a novel flavivirus from mosquitoes in northern europe that is related to mosquito-borne flaviviruses of the tropics. J Virol 83: 9532-9540. doi:10.1128/JVI.00529-09. PubMed: 19570865.
    • (2009) J Virol , vol.83 , pp. 9532-9540
    • Huhtamo, E.1    Putkuri, N.2    Kurkela, S.3    Manni, T.4    Vaheri, A.5
  • 43
    • 78649718268 scopus 로고    scopus 로고
    • Endogenous viral elements in animal genomes
    • PubMed: 21124940
    • Katzourakis A, Gifford RJ (2010) Endogenous viral elements in animal genomes. PLOS Genet 6: e1001191. PubMed: 21124940.
    • (2010) PLOS Genet , vol.6
    • Katzourakis, A.1    Gifford, R.J.2
  • 44
    • 84868158929 scopus 로고    scopus 로고
    • Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius
    • doi:10.1371/journal.pone.0048096. PubMed: 23133553
    • Marinković M, de Leeuw WC, de Jong M, Kraak MH, Admiraal W et al. (2012) Combining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius. PLOS ONE 7: e48096. doi:10.1371/journal.pone.0048096. PubMed: 23133553.
    • (2012) PLOS ONE , vol.7
    • Marinković, M.1    De Leeuw, W.C.2    De Jong, M.3    Kraak, M.H.4    Admiraal, W.5
  • 45
    • 84856288881 scopus 로고    scopus 로고
    • Fossil rhabdoviral sequences integrated into arthropod genomes: Ontogeny, evolution, and potential functionality
    • doi:10.1093/molbev/msr226. PubMed: 21917725
    • Fort P, Albertini A, Van-Hua A, Berthomieu A, Roche S et al. (2012) Fossil rhabdoviral sequences integrated into arthropod genomes: ontogeny, evolution, and potential functionality. Mol Biol Evol 29: 381-390. doi:10.1093/molbev/msr226. PubMed: 21917725.
    • (2012) Mol Biol Evol , vol.29 , pp. 381-390
    • Fort, P.1    Albertini, A.2    Van-Hua, A.3    Berthomieu, A.4    Roche, S.5
  • 46
    • 80053934670 scopus 로고    scopus 로고
    • Recent advances in the molecular and cellular biology of bunyaviruses
    • doi:10.1099/vir.0.035105-0. PubMed: 21865443
    • Walter CT, Barr JN (2011) Recent advances in the molecular and cellular biology of bunyaviruses. J Gen Virol 92: 2467-2484. doi:10.1099/vir.0.035105-0. PubMed: 21865443.
    • (2011) J Gen Virol , vol.92 , pp. 2467-2484
    • Walter, C.T.1    Barr, J.N.2
  • 47
    • 80052284849 scopus 로고    scopus 로고
    • Gouléako virus isolated from West African mosquitoes constitutes a proposed novel genus in the family Bunyaviridae
    • doi:10.1128/JVI.00230-11. PubMed: 21715500
    • Marklewitz M, Handrick S, Grasse W, Kurth A, Lukashev A et al. (2011) Gouléako virus isolated from West African mosquitoes constitutes a proposed novel genus in the family Bunyaviridae. J Virol 85: 9227-9234. doi:10.1128/JVI.00230-11. PubMed: 21715500.
    • (2011) J Virol , vol.85 , pp. 9227-9234
    • Marklewitz, M.1    Handrick, S.2    Grasse, W.3    Kurth, A.4    Lukashev, A.5
  • 48
    • 27744576112 scopus 로고    scopus 로고
    • Expansion of family Reoviridae to include nine-segmented dsRNA viruses: Isolation and characterization of a new virus designated aedes pseudoscutellaris reovirus assigned to a proposed genus (Dinovernavirus)
    • DOI 10.1016/j.virol.2005.08.028, PII S0042682205005180
    • Attoui H, Mohd Jaafar F, Belhouchet M, Biagini P, Cantaloube JF et al. (2005) Expansion of family Reoviridae to include nine-segmented dsRNA viruses: isolation and characterization of a new virus designated Aedes pseudoscutellaris reovirus assigned to a proposed genus (Dinovernavirus). Virology 343: 212-223. doi:10.1016/j.virol.2005.08.028. PubMed: 16171838. (Pubitemid 41598362)
    • (2005) Virology , vol.343 , Issue.2 , pp. 212-223
    • Attoui, H.1    Mohd, J.F.2    Belhouchet, M.3    Biagini, P.4    Cantaloube, J.-F.5    De Micco, P.6    De Lamballerie, X.7
  • 49
    • 33748113981 scopus 로고    scopus 로고
    • Structural studies on orbivirus proteins and particles
    • Reoviruses: Entry, Assembly and Morphogenesis
    • Stuart DI, Grimes JM (2006) Structural studies on orbivirus proteins and particles. Curr Top Microbiol Immunol 309: 221-244. doi:10.1007/3-540-30773-7-8. PubMed: 16909901. (Pubitemid 47400279)
    • (2006) Current Topics in Microbiology and Immunology , vol.309 , pp. 221-244
    • Stuart, D.I.1    Grimes, J.M.2
  • 50
    • 79952175788 scopus 로고    scopus 로고
    • A de novo expression profiling of Anopheles funestus, malaria vector in Africa, using 454 pyrosequencing
    • doi:10.1371/journal.pone.0017418. PubMed: 21364769
    • Gregory R, Darby AC, Irving H, Coulibaly MB, Hughes M et al. (2011) A de novo expression profiling of Anopheles funestus, malaria vector in Africa, using 454 pyrosequencing. PLOS ONE 6: e17418. doi:10.1371/journal.pone.0017418. PubMed: 21364769.
    • (2011) PLOS ONE , vol.6
    • Gregory, R.1    Darby, A.C.2    Irving, H.3    Coulibaly, M.B.4    Hughes, M.5
  • 51
    • 77954539543 scopus 로고    scopus 로고
    • Plant-feeding insects harbor double-stranded RNA viruses encoding a novel proline-alanine rich protein and a polymerase distantly related to that of fungal viruses
    • doi:10.1016/j.virol.2010.05.015. PubMed: 20541786
    • Spear A, Sisterson MS, Yokomi R, Stenger DC (2010) Plant-feeding insects harbor double-stranded RNA viruses encoding a novel proline-alanine rich protein and a polymerase distantly related to that of fungal viruses. Virology 404: 304-311. doi:10.1016/j.virol.2010.05.015. PubMed: 20541786.
    • (2010) Virology , vol.404 , pp. 304-311
    • Spear, A.1    Sisterson, M.S.2    Yokomi, R.3    Stenger, D.C.4
  • 52
    • 0032493749 scopus 로고    scopus 로고
    • Yeast positive-stranded virus-like RNA replicons: 20 S and 23 S RNA terminal nucleotide sequences and 3' end secondary structures resemble those of RNA coliphages
    • DOI 10.1074/jbc.273.32.20363
    • Rodríguez-Cousiño N, Solórzano A, Fujimura T, Esteban R (1998) Yeast positive-stranded virus-like RNA replicons. 20 S and 23 S RNA terminal nucleotide sequences and 3' end secondary structures resemble those of RNA coliphages. J Biol Chem 273: 20363-20371. doi:10.1074/jbc.273.32.20363. PubMed: 9685388. (Pubitemid 28377601)
    • (1998) Journal of Biological Chemistry , vol.273 , Issue.32 , pp. 20363-20371
    • Rodriguez-Cousino, N.1    Solorzano, A.2    Fujimura, T.3    Esteban, R.4
  • 53
    • 84855322610 scopus 로고    scopus 로고
    • A member of the virus family Narnaviridae from the plant pathogenic oomycete Phytophthora infestans
    • doi:10.1007/s00705-011-1126-5. PubMed: 21971871
    • Cai G, Myers K, Fry WE, Hillman BI (2012) A member of the virus family Narnaviridae from the plant pathogenic oomycete Phytophthora infestans. Arch Virol 157: 165-169. doi:10.1007/s00705-011-1126-5. PubMed: 21971871.
    • (2012) Arch Virol , vol.157 , pp. 165-169
    • Cai, G.1    Myers, K.2    Fry, W.E.3    Hillman, B.I.4
  • 54
    • 70350512876 scopus 로고    scopus 로고
    • Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin
    • doi:10.1099/vir.0.013086-0. PubMed: 19535502
    • Rastgou M, Habibi MK, Izadpanah K, Masenga V, Milne RG et al. (2009) Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin. J Gen Virol 90: 2525-2535. doi:10.1099/vir.0.013086-0. PubMed: 19535502.
    • (2009) J Gen Virol , vol.90 , pp. 2525-2535
    • Rastgou, M.1    Habibi, M.K.2    Izadpanah, K.3    Masenga, V.4    Milne, R.G.5
  • 55
    • 0033602706 scopus 로고    scopus 로고
    • Multiple mitochondrial viruses in an isolate of the Dutch elm disease fungus Ophiostoma novo-ulmi
    • DOI 10.1006/viro.1999.9691
    • Hong Y, Dover SL, Cole TE, Brasier CM, Buck KW (1999) Multiple mitochondrial viruses in an isolate of the Dutch Elm disease fungus Ophiostoma novo-ulmi. Virology 258: 118-127. doi:10.1006/viro.1999.9691. PubMed: 10329574. (Pubitemid 29391787)
    • (1999) Virology , vol.258 , Issue.1 , pp. 118-127
    • Hong, Y.1    Dover, S.L.2    Cole, T.E.3    Brasier, C.M.4    Buck, K.W.5
  • 56
    • 76149143382 scopus 로고    scopus 로고
    • Cryspovirus: A new genus of protozoan viruses in the family Partitiviridae
    • doi:10.1007/s00705-009-0513-7. PubMed: 19856142
    • Nibert ML, Woods KM, Upton SJ, Ghabrial SA (2009) Cryspovirus: a new genus of protozoan viruses in the family Partitiviridae. Arch Virol 154: 1959-1965. doi:10.1007/s00705-009-0513-7. PubMed: 19856142.
    • (2009) Arch Virol , vol.154 , pp. 1959-1965
    • Nibert, M.L.1    Woods, K.M.2    Upton, S.J.3    Ghabrial, S.A.4
  • 57
    • 78049512653 scopus 로고    scopus 로고
    • Widespread horizontal gene transfer from double-stranded RNA viruses to eukaryotic nuclear genomes
    • doi:10.1128/JVI.00955-10. PubMed: 20810725
    • Liu H, Fu Y, Jiang D, Li G, Xie J et al. (2010) Widespread horizontal gene transfer from double-stranded RNA viruses to eukaryotic nuclear genomes. J Virol 84: 11876-11887. doi:10.1128/JVI.00955-10. PubMed: 20810725.
    • (2010) J Virol , vol.84 , pp. 11876-11887
    • Liu, H.1    Fu, Y.2    Jiang, D.3    Li, G.4    Xie, J.5
  • 58
    • 0016695958 scopus 로고
    • An agent in the Aedes aegypti cell line (Peleg) which causes fusion of Aedes albopictus cells
    • doi:10.1016/0042-6822(75)90113-0. PubMed: 806166
    • Stollar V, Thomas VL (1975) An agent in the Aedes aegypti cell line (Peleg) which causes fusion of Aedes albopictus cells. Virology 64: 367-377. doi:10.1016/0042-6822(75)90113-0. PubMed: 806166.
    • (1975) Virology , vol.64 , pp. 367-377
    • Stollar, V.1    Thomas, V.L.2
  • 59
    • 33847021536 scopus 로고    scopus 로고
    • Genetic characterization of a new insect flavivirus isolated from Culex pipiens mosquito in Japan
    • DOI 10.1016/j.virol.2006.09.039, PII S0042682206006957
    • Hoshino K, Isawa H, Tsuda Y, Yano K, Sasaki T et al. (2007) Genetic characterization of a new insect flavivirus isolated from Culex pipiens mosquito in Japan. Virology 359: 405-414. doi:10.1016/j.virol.2006.09.039. PubMed: 17070886. (Pubitemid 46274879)
    • (2007) Virology , vol.359 , Issue.2 , pp. 405-414
    • Hoshino, K.1    Isawa, H.2    Tsuda, Y.3    Yano, K.4    Sasaki, T.5    Yuda, M.6    Takasaki, T.7    Kobayashi, M.8    Sawabe, K.9
  • 60
    • 56749156014 scopus 로고    scopus 로고
    • Culex flavivirus isolates from mosquitoes in Guatemala
    • doi:10.1603/0022-2585(2008)45[1187:CFIFMI]2.0.CO;. PubMed: 19058647
    • Morales-Betoulle ME, Monzón Pineda ML, Sosa SM, Panella N, López MR et al. (2008) Culex flavivirus isolates from mosquitoes in Guatemala. J Med Entomol 45: 1187-1190. doi:10.1603/0022-2585(2008)45[1187: CFIFMI]2.0.CO;2. PubMed: 19058647.
    • (2008) J Med Entomol , vol.45 , pp. 1187-1190
    • Morales-Betoulle, M.E.1    Monzón Pineda, M.L.2    Sosa, S.M.3    Panella, N.4    López, M.R.5
  • 61
    • 58149473279 scopus 로고    scopus 로고
    • Detection of RNA from a novel West Nile-like virus and high prevalence of an insect-specific flavivirus in mosquitoes in the Yucatan Peninsula of Mexico
    • PubMed: 19141845
    • Farfan-Ale JA, Loroño-Pino MA, Garcia-Rejon JE, Hovav E, Powers AM et al. (2009) Detection of RNA from a novel West Nile-like virus and high prevalence of an insect-specific flavivirus in mosquitoes in the Yucatan Peninsula of Mexico. Am J Trop Med Hyg 80: 85-95. PubMed: 19141845.
    • (2009) Am J Trop Med Hyg , vol.80 , pp. 85-95
    • Farfan-Ale, J.A.1    Loroño-Pino, M.A.2    Garcia-Rejon, J.E.3    Hovav, E.4    Powers, A.M.5
  • 62
    • 79952117428 scopus 로고    scopus 로고
    • Detection of flaviviruses and orthobunyaviruses in mosquitoes in the Yucatan Peninsula of Mexico in 2008
    • doi:10.1089/vbz.2009.0196. PubMed: 20370430
    • Farfan-Ale JA, Loroño-Pino MA, Garcia-Rejon JE, Soto V, Lin M et al. (2010) Detection of flaviviruses and orthobunyaviruses in mosquitoes in the Yucatan Peninsula of Mexico in 2008. Vector Borne Zoonotic Dis 10: 777-783. doi:10.1089/vbz.2009.0196. PubMed: 20370430.
    • (2010) Vector Borne Zoonotic Dis , vol.10 , pp. 777-783
    • Farfan-Ale, J.A.1    Loroño-Pino, M.A.2    Garcia-Rejon, J.E.3    Soto, V.4    Lin, M.5
  • 63
    • 70350449280 scopus 로고    scopus 로고
    • Isolation of a novel species of flavivirus and a new strain of Culex flavivirus (Flaviviridae) from a natural mosquito population in Uganda
    • doi:10.1099/vir.0.014183-0. PubMed: 19656970
    • Cook S, Moureau G, Harbach RE, Mukwaya L, Goodger K et al. (2009) Isolation of a novel species of flavivirus and a new strain of Culex flavivirus (Flaviviridae) from a natural mosquito population in Uganda. J Gen Virol 90: 2669-2678. doi:10.1099/vir.0.014183-0. PubMed: 19656970.
    • (2009) J Gen Virol , vol.90 , pp. 2669-2678
    • Cook, S.1    Moureau, G.2    Harbach, R.E.3    Mukwaya, L.4    Goodger, K.5
  • 64
    • 61649089461 scopus 로고    scopus 로고
    • Characterization of Culex Flavivirus (Flaviviridae) strains isolated from mosquitoes in the United States and Trinidad
    • doi:10.1016/j.virol.2008.12.034. PubMed: 19193389
    • Kim DY, Guzman H, Bueno R Jr, Dennett JA, Auguste AJ et al. (2009) Characterization of Culex Flavivirus (Flaviviridae) strains isolated from mosquitoes in the United States and Trinidad. Virology 386: 154-159. doi:10.1016/j.virol.2008.12.034. PubMed: 19193389.
    • (2009) Virology , vol.386 , pp. 154-159
    • Kim, D.Y.1    Guzman, H.2    Bueno Jr., R.3    Dennett, J.A.4    Auguste, A.J.5
  • 65
    • 67650713523 scopus 로고    scopus 로고
    • Isolation and characterization of a new insect flavivirus from Aedes albopictus and Aedes flavopictus mosquitoes in Japan
    • doi:10.1016/j.virol.2009.06.025. PubMed: 19580982
    • Hoshino K, Isawa H, Tsuda Y, Sawabe K, Kobayashi M (2009) Isolation and characterization of a new insect flavivirus from Aedes albopictus and Aedes flavopictus mosquitoes in Japan. Virology 391: 119-129. doi:10.1016/j.virol. 2009.06.025. PubMed: 19580982.
    • (2009) Virology , vol.391 , pp. 119-129
    • Hoshino, K.1    Isawa, H.2    Tsuda, Y.3    Sawabe, K.4    Kobayashi, M.5
  • 66
    • 65549140194 scopus 로고    scopus 로고
    • Isolation and characterization of a new mosquito flavivirus, Quang Binh virus, from Vietnam
    • doi:10.1007/s00705-009-0373-1. PubMed: 19347244
    • Crabtree MB, Nga PT, Miller BR (2009) Isolation and characterization of a new mosquito flavivirus, Quang Binh virus, from Vietnam. Arch Virol 154: 857-860. doi:10.1007/s00705-009-0373-1. PubMed: 19347244.
    • (2009) Arch Virol , vol.154 , pp. 857-860
    • Crabtree, M.B.1    Nga, P.T.2    Miller, B.R.3
  • 69
    • 65249109142 scopus 로고    scopus 로고
    • Detection and monitoring of mosquito flaviviruses in Spain between 2001 and 2005
    • doi:10.1089/vbz.2008.0073. PubMed: 18959502
    • Aranda C, Sánchez-Seco MP, Cáceres F, Escosa R, Gálvez JC et al. (2009) Detection and monitoring of mosquito flaviviruses in Spain between 2001 and 2005. Vector Borne Zoonotic Dis 9: 171-178. doi:10.1089/vbz.2008.0073. PubMed: 18959502.
    • (2009) Vector Borne Zoonotic Dis , vol.9 , pp. 171-178
    • Aranda, C.1    Sánchez-Seco, M.P.2    Cáceres, F.3    Escosa, R.4    Gálvez, J.C.5
  • 70
    • 67650146639 scopus 로고    scopus 로고
    • Surveillance of mosquito-borne viruses in Alberta using reverse transcription polymerase chain reaction with generic primers
    • doi:10.1603/033.046.0332. PubMed: 19496438
    • Pabbaraju K, Ho KC, Wong S, Fox JD, Kaplen B et al. (2009) Surveillance of mosquito-borne viruses in Alberta using reverse transcription polymerase chain reaction with generic primers. J Med Entomol 46: 640-648. doi:10.1603/033.046.0332. PubMed: 19496438.
    • (2009) J Med Entomol , vol.46 , pp. 640-648
    • Pabbaraju, K.1    Ho, K.C.2    Wong, S.3    Fox, J.D.4    Kaplen, B.5
  • 71
    • 68149145588 scopus 로고    scopus 로고
    • Detection of novel insect flavivirus sequences integrated in Aedes albopictus (Diptera: Culicidae) in Northern Italy
    • doi:10.1186/1743-422X-6-93. PubMed: 19575816
    • Roiz D, Vázquez A, Seco MP, Tenorio A, Rizzoli A (2009) Detection of novel insect flavivirus sequences integrated in Aedes albopictus (Diptera: Culicidae) in Northern Italy. Virol J 6: 93. doi:10.1186/1743-422X-6-93. PubMed: 19575816.
    • (2009) Virol J , vol.6 , pp. 93
    • Roiz, D.1    Vázquez, A.2    Seco, M.P.3    Tenorio, A.4    Rizzoli, A.5
  • 72
    • 77950580345 scopus 로고    scopus 로고
    • Surveillance of arboviruses in Spanish wetlands: Detection of new flavi- and phleboviruses
    • PubMed: 19485777
    • Sánchez-Seco MP, Vázquez A, Collao X, Hernández L, Aranda C et al. (2009) Surveillance of arboviruses in Spanish wetlands: detection of new flavi- and phleboviruses. Vector Borne Zoonotic Dis 10: 203-206. PubMed: 19485777.
    • (2009) Vector Borne Zoonotic Dis , vol.10 , pp. 203-206
    • Sánchez-Seco, M.P.1    Vázquez, A.2    Collao, X.3    Hernández, L.4    Aranda, C.5
  • 73
    • 78649368857 scopus 로고    scopus 로고
    • Arboviral survey of mosquitoes in two northern Italian regions in 2007 and 2008
    • doi:10.1089/vbz.2009.0176. PubMed: 20370434
    • Calzolari M, Bonilauri P, Bellini R, Caimi M, Defilippo F et al. (2010) Arboviral survey of mosquitoes in two northern Italian regions in 2007 and 2008. Vector Borne Zoonotic Dis 10: 875-884. doi:10.1089/vbz.2009.0176. PubMed: 20370434.
    • (2010) Vector Borne Zoonotic Dis , vol.10 , pp. 875-884
    • Calzolari, M.1    Bonilauri, P.2    Bellini, R.3    Caimi, M.4    Defilippo, F.5
  • 74
    • 79960248955 scopus 로고    scopus 로고
    • Insect-specific flaviviruses from Culex mosquitoes in Colorado, with evidence of vertical transmission
    • doi:10.4269/ajtmh.2011.10-0474. PubMed: 21734144
    • Bolling BG, Eisen L, Moore CG, Blair CD (2011) Insect-specific flaviviruses from Culex mosquitoes in Colorado, with evidence of vertical transmission. Am J Trop Med Hyg 85: 169-177. doi:10.4269/ajtmh.2011.10-0474. PubMed: 21734144.
    • (2011) Am J Trop Med Hyg , vol.85 , pp. 169-177
    • Bolling, B.G.1    Eisen, L.2    Moore, C.G.3    Blair, C.D.4
  • 76
    • 84903786201 scopus 로고    scopus 로고
    • The evolution of novel fungal genes from non-retroviral RNA viruses
    • doi:10.1186/1741-7007-7-88. PubMed: 20021636
    • Taylor DJ, Bruenn J (2009) The evolution of novel fungal genes from non-retroviral RNA viruses. BMC Biol 7: 88. doi:10.1186/1741-7007-7-88. PubMed: 20021636.
    • (2009) BMC Biol , vol.7 , pp. 88
    • Taylor, D.J.1    Bruenn, J.2
  • 77
    • 84867218805 scopus 로고    scopus 로고
    • Paleovirology and virally derived immunity
    • doi:10.1016/j.tree.2012.07.007. PubMed: 22901901
    • Aswad A, Katzourakis A (2012) Paleovirology and virally derived immunity. Trends Ecol Evol 27: 627-636. doi:10.1016/j.tree.2012.07.007. PubMed: 22901901.
    • (2012) Trends Ecol Evol , vol.27 , pp. 627-636
    • Aswad, A.1    Katzourakis, A.2


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