-
1
-
-
3242665312
-
Array-based comparative genomic hybridization for the detection of DNA sequence copy number changes in Barrett's adenocarcinoma
-
Albrecht B, Hausmann M, Zitzelsberger H, Stein H, Siewert JR, Hopt U, Langer R, Hofler H, Werner M, Walch A. 2004. Array-based comparative genomic hybridization for the detection of DNA sequence copy number changes in Barrett's adenocarcinoma. J Pathol 203:780-788.
-
(2004)
J Pathol
, vol.203
, pp. 780-788
-
-
Albrecht, B.1
Hausmann, M.2
Zitzelsberger, H.3
Stein, H.4
Siewert, J.R.5
Hopt, U.6
Langer, R.7
Hofler, H.8
Werner, M.9
Walch, A.10
-
2
-
-
84859024264
-
Comparative genomics of esophageal adenocarcinoma and squamous cell carcinoma
-
Bandla S, Pennathur A, Luketich JD, Beer DG, Lin L, Bass AJ, Godfrey TE, Litle VR. 2012. Comparative genomics of esophageal adenocarcinoma and squamous cell carcinoma. Ann Thorac Surg 93:1101-1106.
-
(2012)
Ann Thorac Surg
, vol.93
, pp. 1101-1106
-
-
Bandla, S.1
Pennathur, A.2
Luketich, J.D.3
Beer, D.G.4
Lin, L.5
Bass, A.J.6
Godfrey, T.E.7
Litle, V.R.8
-
3
-
-
18544365698
-
Gene-expression profiles predict survival of patients with lung adenocarcinoma
-
Beer DG, Kardia SL, Huang CC, Giordano TJ, Levin AM, Misek DE, Lin L, Chen G, Gharib TG, Thomas DG, Lizyness ML, Kuick R, Hayasaka S, Taylor JM, Iannettoni MD, Orringer MB, Hanash S. 2002. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med 8:816-824.
-
(2002)
Nat Med
, vol.8
, pp. 816-824
-
-
Beer, D.G.1
Kardia, S.L.2
Huang, C.C.3
Giordano, T.J.4
Levin, A.M.5
Misek, D.E.6
Lin, L.7
Chen, G.8
Gharib, T.G.9
Thomas, D.G.10
Lizyness, M.L.11
Kuick, R.12
Hayasaka, S.13
Taylor, J.M.14
Iannettoni, M.D.15
Orringer, M.B.16
Hanash, S.17
-
4
-
-
38049100456
-
Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma
-
Beroukhim R, Getz G, Nghiemphu L, Barretina J, Hsueh T, Linhart D, Vivanco I, Lee JC, Huang JH, Alexander S, Du J, Kau T, Thomas RK, Shah K, Soto H, Perner S, Prensner J, Debiasi RM, Demichelis F, Hatton C, Rubin MA, Garraway LA, Nelson SF, Liau L, Mischel PS, Cloughesy TF, Meyerson M, Golub TA, Lander ES, Mellinghoff IK, Sellers WR. 2007. Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma. Proc Natl Acad Sci USA 104:20007-20012.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 20007-20012
-
-
Beroukhim, R.1
Getz, G.2
Nghiemphu, L.3
Barretina, J.4
Hsueh, T.5
Linhart, D.6
Vivanco, I.7
Lee, J.C.8
Huang, J.H.9
Alexander, S.10
Du, J.11
Kau, T.12
Thomas, R.K.13
Shah, K.14
Soto, H.15
Perner, S.16
Prensner, J.17
Debiasi, R.M.18
Demichelis, F.19
Hatton, C.20
Rubin, M.A.21
Garraway, L.A.22
Nelson, S.F.23
Liau, L.24
Mischel, P.S.25
Cloughesy, T.F.26
Meyerson, M.27
Golub, T.A.28
Lander, E.S.29
Mellinghoff, I.K.30
Sellers, W.R.31
more..
-
5
-
-
84869091997
-
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes
-
Biankin AV, Biankin AV, Waddell N, Kassahn KS, Gingras MC, Muthuswamy LB, Johns AL, Miller DK, Wilson PJ, Patch AM, Wu J, Chang DK, Cowley MJ, Gardiner BB, Song S, Harliwong I, Idrisoglu S, Nourse C, Nourbakhsh E, Manning S, Wani S, Gongora M, Pajic M, Scarlett CJ, Gill AJ, Pinho AV, Rooman I, Anderson M, Holmes O, Leonard C, Taylor D, Wood S, Xu Q, Nones K, Fink JL, Christ A, Bruxner T, Cloonan N, Kolle G, Newell F, Pinese M, Mead RS, Humphris JL, Kaplan W, Jones MD, Colvin EK, Nagrial AM, Humphrey ES, Chou A, Chin VT, Chantrill LA, Mawson A, Samra JS, Kench JG, Lovell JA, Daly RJ, Merrett ND, Toon C, Epari K, Nguyen NQ, Barbour A, Zeps N; Australian Pancreatic Cancer Genome Initiative, Kakkar N, Zhao F, Wu YQ, Wang M, Muzny DM, Fisher WE, Brunicardi FC, Hodges SE, Reid JG, Drummond J, Chang K, Han Y, Lewis LR, Dinh H, Buhay CJ, Beck T, Timms L, Sam M, Begley K, Brown A, Pai D, Panchal A, Buchner N, De Borja R, Denroche RE, Yung CK, Serra S, Onetto N, Mukhopadhyay D, Tsao MS, Shaw PA, Petersen GM, Gallinger S, Hruban RH, Maitra A, Iacobuzio-Donahue CA, Schulick RD, Wolfgang CL, Morgan RA, Lawlor RT, Capelli P, Corbo V, Scardoni M, Tortora G, Tempero MA, Mann KM, Jenkins NA, Perez-Mancera PA, Adams DJ, Largaespada DA, Wessels LF, Rust AG, Stein LD, Tuveson DA, Copeland NG, Musgrove EA, Scarpa A, Eshleman JR, Hudson TJ, Sutherland RL, Wheeler DA, Pearson JV, McPherson JD, Gibbs RA, Grimmond SM. 2012. Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature 491:399-405.
-
(2012)
Nature
, vol.491
, pp. 399-405
-
-
Biankin, A.V.1
Biankin, A.V.2
Waddell, N.3
Kassahn, K.S.4
Gingras, M.C.5
Muthuswamy, L.B.6
Johns, A.L.7
Miller, D.K.8
Wilson, P.J.9
Patch, A.M.10
Wu, J.11
Chang, D.K.12
Cowley, M.J.13
Gardiner, B.B.14
Song, S.15
Harliwong, I.16
Idrisoglu, S.17
Nourse, C.18
Nourbakhsh, E.19
Manning, S.20
Wani, S.21
Gongora, M.22
Pajic, M.23
Scarlett, C.J.24
Gill, A.J.25
Pinho, A.V.26
Rooman, I.27
Anderson, M.28
Holmes, O.29
Leonard, C.30
Taylor, D.31
Wood, S.32
Xu, Q.33
Nones, K.34
Fink, J.L.35
Christ, A.36
Bruxner, T.37
Cloonan, N.38
Kolle, G.39
Newell, F.40
Pinese, M.41
Mead, R.S.42
Humphris, J.L.43
Kaplan, W.44
Jones, M.D.45
Colvin, E.K.46
Nagrial, A.M.47
Humphrey, E.S.48
Chou, A.49
Chin, V.T.50
Chantrill, L.A.51
Mawson, A.52
Samra, J.S.53
Kench, J.G.54
Lovell, J.A.55
Daly, R.J.56
Merrett, N.D.57
Toon, C.58
Epari, K.59
Nguyen, N.Q.60
Barbour, A.61
Zeps, N.62
Australian Pancreatic Cancer Genome Initiative63
Kakkar, N.64
Zhao, F.65
Wu, Y.Q.66
Wang, M.67
Muzny, D.M.68
Fisher, W.E.69
Brunicardi, F.C.70
Hodges, S.E.71
Reid, J.G.72
Drummond, J.73
Chang, K.74
Han, Y.75
Lewis, L.R.76
Dinh, H.77
Buhay, C.J.78
Beck, T.79
Timms, L.80
Sam, M.81
Begley, K.82
Brown, A.83
Pai, D.84
Panchal, A.85
Buchner, N.86
De Borja, R.87
Denroche, R.E.88
Yung, C.K.89
Serra, S.90
Onetto, N.91
Mukhopadhyay, D.92
Tsao, M.S.93
Shaw, P.A.94
Petersen, G.M.95
Gallinger, S.96
Hruban, R.H.97
Maitra, A.98
Iacobuzio-Donahue, C.A.99
Schulick, R.D.100
Wolfgang, C.L.101
Morgan, R.A.102
Lawlor, R.T.103
Capelli, P.104
Corbo, V.105
Scardoni, M.106
Tortora, G.107
Tempero, M.A.108
Mann, K.M.109
Jenkins, N.A.110
Perez-Mancera, P.A.111
Adams, D.J.112
Largaespada, D.A.113
Wessels, L.F.114
Rust, A.G.115
Stein, L.D.116
Tuveson, D.A.117
Copeland, N.G.118
Musgrove, E.A.119
Scarpa, A.120
Eshleman, J.R.121
Hudson, T.J.122
Sutherland, R.L.123
Wheeler, D.A.124
Pearson, J.V.125
McPherson, J.D.126
Gibbs, R.A.127
Grimmond, S.M.128
more..
-
6
-
-
0034655228
-
A prospective longitudinal study examining the quality of life of patients with esophageal carcinoma
-
Blazeby JM, Farndon JR, Donovan J, Alderson D. 2000. A prospective longitudinal study examining the quality of life of patients with esophageal carcinoma. Cancer 88:1781-1787.
-
(2000)
Cancer
, vol.88
, pp. 1781-1787
-
-
Blazeby, J.M.1
Farndon, J.R.2
Donovan, J.3
Alderson, D.4
-
7
-
-
0033963379
-
HER-2/neu gene amplification by FISH predicts poor survival in Barrett's esophagus-associated adenocarcinoma
-
Brien TP, Odze RD, Sheehan CE, McKenna BJ, Ross JS. 2000. HER-2/neu gene amplification by FISH predicts poor survival in Barrett's esophagus-associated adenocarcinoma. Hum Pathol 31:35-39.
-
(2000)
Hum Pathol
, vol.31
, pp. 35-39
-
-
Brien, T.P.1
Odze, R.D.2
Sheehan, C.E.3
McKenna, B.J.4
Ross, J.S.5
-
8
-
-
84862777035
-
A comprehensive survey of genomic alterations in gastric cancer reveals systematic patterns of molecular exclusivity and co-occurrence among distinct therapeutic targets
-
Deng N, Goh LK, Wang H, Das K, Tao J, Tan IB, Zhang S, Lee M, Wu J, Lim KH, Lei Z, Goh G, Lim Q-Y, Tan AL-K, Sin Poh DY, Riahi S, Bell S, Shi MM, Linnartz R, Zhu F, Yeoh KG, Toh HC, Yong WP, Cheong HC, Rha SY, Boussioutas A, Grabsch H, Rozen S, Tan P. 2012. A comprehensive survey of genomic alterations in gastric cancer reveals systematic patterns of molecular exclusivity and co-occurrence among distinct therapeutic targets. Gut 61:673-684.
-
(2012)
Gut
, vol.61
, pp. 673-684
-
-
Deng, N.1
Goh, L.K.2
Wang, H.3
Das, K.4
Tao, J.5
Tan, I.B.6
Zhang, S.7
Lee, M.8
Wu, J.9
Lim, K.H.10
Lei, Z.11
Goh, G.12
Lim, Q.-Y.13
Tan, A.-K.14
Sin Poh, D.Y.15
Riahi, S.16
Bell, S.17
Shi, M.M.18
Linnartz, R.19
Zhu, F.20
Yeoh, K.G.21
Toh, H.C.22
Yong, W.P.23
Cheong, H.C.24
Rha, S.Y.25
Boussioutas, A.26
Grabsch, H.27
Rozen, S.28
Tan, P.29
more..
-
9
-
-
84865238936
-
Gastrointestinal adenocarcinomas of the esophagus, stomach and colon exhibit distinct patterns of genome instability and oncogenesis
-
Dulak AM, Schumacher S, van Lieshout J, Imamura Y, Fox C, Shim B, Ramos A, Saksena G, Baca S, Baselga J, Tabernero J, Barretina J, Enzinger P, Corso G, Roviello F, Lin L, Bandla S, Luketich J, Pennathur A, Meyerson M, Ogino S, Shivdasani RA, Beer DG, Godfrey TE, Beroukhim R, Bass AJ. 2012. Gastrointestinal adenocarcinomas of the esophagus, stomach and colon exhibit distinct patterns of genome instability and oncogenesis. Cancer Res 72:4383-4393.
-
(2012)
Cancer Res
, vol.72
, pp. 4383-4393
-
-
Dulak, A.M.1
Schumacher, S.2
van Lieshout, J.3
Imamura, Y.4
Fox, C.5
Shim, B.6
Ramos, A.7
Saksena, G.8
Baca, S.9
Baselga, J.10
Tabernero, J.11
Barretina, J.12
Enzinger, P.13
Corso, G.14
Roviello, F.15
Lin, L.16
Bandla, S.17
Luketich, J.18
Pennathur, A.19
Meyerson, M.20
Ogino, S.21
Shivdasani, R.A.22
Beer, D.G.23
Godfrey, T.E.24
Beroukhim, R.25
Bass, A.J.26
more..
-
10
-
-
84878593111
-
Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity
-
Dulak AM, Stojanov P, Peng S, Lawrence MS, Fox C, Stewart C, Bandla S, Imamura Y, Schumacher SE, Shefler E, McKenna A, Carter SL, Cibulskis K, Sivachenko A, Saksena G, Voet D, Ramos AH, Auclair D, Thompson K, Sougnez C, Onofrio RC, Guiducci C, Beroukhim R, Zhou Z, Lin L, Lin J, Reddy R, Chang A, Landrenau R, Pennathur A, Ogino S, Luketich JD, Golub TR, Gabriel SB, Lander ES, Beer DG, Godfrey TE, Getz G, Bass AJ. 2013. Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity. Nat Genetics 45:478-486.
-
(2013)
Nat Genetics
, vol.45
, pp. 478-486
-
-
Dulak, A.M.1
Stojanov, P.2
Peng, S.3
Lawrence, M.S.4
Fox, C.5
Stewart, C.6
Bandla, S.7
Imamura, Y.8
Schumacher, S.E.9
Shefler, E.10
McKenna, A.11
Carter, S.L.12
Cibulskis, K.13
Sivachenko, A.14
Saksena, G.15
Voet, D.16
Ramos, A.H.17
Auclair, D.18
Thompson, K.19
Sougnez, C.20
Onofrio, R.C.21
Guiducci, C.22
Beroukhim, R.23
Zhou, Z.24
Lin, L.25
Lin, J.26
Reddy, R.27
Chang, A.28
Landrenau, R.29
Pennathur, A.30
Ogino, S.31
Luketich, J.D.32
Golub, T.R.33
Gabriel, S.B.34
Lander, E.S.35
Beer, D.G.36
Godfrey, T.E.37
Getz, G.38
Bass, A.J.39
more..
-
11
-
-
80052575003
-
Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma
-
Goh XY, Rees JR, Paterson AL, Chin SF, Marioni JC, Save V, O'Donovan M, Eijk PP, Alderson D, Ylstra B, Caldas C, Fitzgerald RC. 2011. Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma. Gut 60:1317-1326.
-
(2011)
Gut
, vol.60
, pp. 1317-1326
-
-
Goh, X.Y.1
Rees, J.R.2
Paterson, A.L.3
Chin, S.F.4
Marioni, J.C.5
Save, V.6
O'Donovan, M.7
Eijk, P.P.8
Alderson, D.9
Ylstra, B.10
Caldas, C.11
Fitzgerald, R.C.12
-
12
-
-
33947235762
-
Gene expression profiling of esophageal cancer: Comparative analysis of Barrett's esophagus, adenocarcinoma, and squamous cell carcinoma
-
Greenawalt DM, Duong C, Smyth GK, Ciavarella ML, Thompson NJ, Tiang T, Murray WK, Thomas RJS, Phillips WA. 2007. Gene expression profiling of esophageal cancer: Comparative analysis of Barrett's esophagus, adenocarcinoma, and squamous cell carcinoma. Int J Cancer 120:1914-1921.
-
(2007)
Int J Cancer
, vol.120
, pp. 1914-1921
-
-
Greenawalt, D.M.1
Duong, C.2
Smyth, G.K.3
Ciavarella, M.L.4
Thompson, N.J.5
Tiang, T.6
Murray, W.K.7
Thomas, R.J.S.8
Phillips, W.A.9
-
13
-
-
77956402130
-
Genome-wide catalogue of chromosomal aberrations in Barrett's esophagus and esophageal adenocarcinoma: A High-Density Single Nucleotide Polymorphism Array Analysis
-
Gu J, Ajani JA, Hawk ET, Ye Y, Lee JH, Bhutani MS, Hofstetter WL, Swisher SG, Wang KK, Wu X. 2010. Genome-wide catalogue of chromosomal aberrations in Barrett's esophagus and esophageal adenocarcinoma: A High-Density Single Nucleotide Polymorphism Array Analysis. Cancer Prev Res 3:1176-1186.
-
(2010)
Cancer Prev Res
, vol.3
, pp. 1176-1186
-
-
Gu, J.1
Ajani, J.A.2
Hawk, E.T.3
Ye, Y.4
Lee, J.H.5
Bhutani, M.S.6
Hofstetter, W.L.7
Swisher, S.G.8
Wang, K.K.9
Wu, X.10
-
14
-
-
84871962051
-
Critical role for the receptor tyrosine kinase EPHB4 in esophageal cancers
-
Hasina R, Mollberg NM, Kawada I, Mutreja K, Kanade G, Yala S, Surati M, Liu R, Li X, Zhou Y, Ferguson BD, Nallasura V, Cohen KS, Hyjek E, Mueller J, Kanteti R, El-Hashani E, Kane D, Shimada Y, Lingen MW, Husain AN, Posner MC, Waxman I, Villaflor VM, Ferguson MK, Varticovski L, Vokes EE, Gill P, Salgia R. 2012. Critical role for the receptor tyrosine kinase EPHB4 in esophageal cancers. Cancer Res 73:184-194.
-
(2012)
Cancer Res
, vol.73
, pp. 184-194
-
-
Hasina, R.1
Mollberg, N.M.2
Kawada, I.3
Mutreja, K.4
Kanade, G.5
Yala, S.6
Surati, M.7
Liu, R.8
Li, X.9
Zhou, Y.10
Ferguson, B.D.11
Nallasura, V.12
Cohen, K.S.13
Hyjek, E.14
Mueller, J.15
Kanteti, R.16
El-Hashani, E.17
Kane, D.18
Shimada, Y.19
Lingen, M.W.20
Husain, A.N.21
Posner, M.C.22
Waxman, I.23
Villaflor, V.M.24
Ferguson, M.K.25
Varticovski, L.26
Vokes, E.E.27
Gill, P.28
Salgia, R.29
more..
-
15
-
-
79956223031
-
Defining cure for esophageal cancer: Analysis of actual 5-year survivors following esophagectomy
-
Hirst J, Smithers BM, Gotley DC, Thomas J, Barbour A. 2011. Defining cure for esophageal cancer: Analysis of actual 5-year survivors following esophagectomy. Ann Surg Oncol 18:1766-1774.
-
(2011)
Ann Surg Oncol
, vol.18
, pp. 1766-1774
-
-
Hirst, J.1
Smithers, B.M.2
Gotley, D.C.3
Thomas, J.4
Barbour, A.5
-
16
-
-
67650584040
-
-
Bethesda, MD: National Cancer Institute.
-
Horner MJRL, Krapcho M, Neyman N, Aminou R, Howlader N, Altekruse SF, Feuer EJ, Huang L, Mariotto A, Miller BA, Lewis DR, Eisner MP, Stinchcomb DG, Edwards BK. 2009. SEER Cancer Statistics Review. Bethesda, MD: National Cancer Institute.
-
(2009)
SEER Cancer Statistics Review
-
-
Horner, M.J.R.L.1
Krapcho, M.2
Neyman, N.3
Aminou, R.4
Howlader, N.5
Altekruse, S.F.6
Feuer, E.J.7
Huang, L.8
Mariotto, A.9
Miller, B.A.10
Lewis, D.R.11
Eisner, M.P.12
Stinchcomb, D.G.13
Edwards, B.K.14
-
17
-
-
79959981720
-
HER2 amplification, overexpression and score criteria in esophageal adenocarcinoma
-
Hu Y, Bandla S, Godfrey TE, Tan D, Luketich JD, Pennathur A, Qiu X, Hicks DG, Peters JH, Zhou Z. 2011. HER2 amplification, overexpression and score criteria in esophageal adenocarcinoma. Mod Pathol 24:899-907.
-
(2011)
Mod Pathol
, vol.24
, pp. 899-907
-
-
Hu, Y.1
Bandla, S.2
Godfrey, T.E.3
Tan, D.4
Luketich, J.D.5
Pennathur, A.6
Qiu, X.7
Hicks, D.G.8
Peters, J.H.9
Zhou, Z.10
-
18
-
-
0032514743
-
A novel amplicon at 8p22-23 results in overexpression of cathepsin B in esophageal adenocarcinoma
-
Hughes SJ, Glover TW, Zhu XX, Kuick R, Thoraval D, Orringer MB, Beer DG, Hanash S. 1998. A novel amplicon at 8p22-23 results in overexpression of cathepsin B in esophageal adenocarcinoma. Proc Natl Acad Sci USA 95:12410-12415.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 12410-12415
-
-
Hughes, S.J.1
Glover, T.W.2
Zhu, X.X.3
Kuick, R.4
Thoraval, D.5
Orringer, M.B.6
Beer, D.G.7
Hanash, S.8
-
19
-
-
33747855481
-
Comparing antibody and small-molecule therapies for cancer
-
Imai K, Takaoka A. 2006. Comparing antibody and small-molecule therapies for cancer. Nat Rev Cancer 6:714-727.
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 714-727
-
-
Imai, K.1
Takaoka, A.2
-
20
-
-
33745110595
-
Prognostic significance of expression patterns of c-erbB-2, p53, p16INK4A, p27KIP1, cyclin D1 and epidermal growth factor receptor in oesophageal adenocarcinoma: A tissue microarray study
-
Langer R, Von Rahden BH, Nahrig J, Von Weyhern C, Reiter R, Feith M, Stein HJ, Siewert JR, Hofler H, Sarbia M. 2006. Prognostic significance of expression patterns of c-erbB-2, p53, p16INK4A, p27KIP1, cyclin D1 and epidermal growth factor receptor in oesophageal adenocarcinoma: A tissue microarray study. J Clin Pathol 59:631-634.
-
(2006)
J Clin Pathol
, vol.59
, pp. 631-634
-
-
Langer, R.1
Von Rahden, B.H.2
Nahrig, J.3
Von Weyhern, C.4
Reiter, R.5
Feith, M.6
Stein, H.J.7
Siewert, J.R.8
Hofler, H.9
Sarbia, M.10
-
21
-
-
84255191993
-
GLIPR1 suppresses prostate cancer development through targeted oncoprotein destruction
-
Li L, Ren C, Yang G, Fattah EA, Goltsov AA, Kim SM, Lee JS, Park S, Demayo FJ, Ittmann MM, Troncoso P, Thompson TC. 2011. GLIPR1 suppresses prostate cancer development through targeted oncoprotein destruction. Cancer Res 71:7694-7704.
-
(2011)
Cancer Res
, vol.71
, pp. 7694-7704
-
-
Li, L.1
Ren, C.2
Yang, G.3
Fattah, E.A.4
Goltsov, A.A.5
Kim, S.M.6
Lee, J.S.7
Park, S.8
Demayo, F.J.9
Ittmann, M.M.10
Troncoso, P.11
Thompson, T.C.12
-
22
-
-
0034162781
-
A minimal critical region of the 8p22-23 amplicon in esophageal adenocarcinomas defined using sequence tagged site-amplification mapping and quantitative polymerase chain reaction includes the GATA-4 gene
-
Lin L, Aggarwal S, Glover TW, Orringer MB, Hanash S, Beer DG. 2000. A minimal critical region of the 8p22-23 amplicon in esophageal adenocarcinomas defined using sequence tagged site-amplification mapping and quantitative polymerase chain reaction includes the GATA-4 gene. Cancer Res 60:1341-1347.
-
(2000)
Cancer Res
, vol.60
, pp. 1341-1347
-
-
Lin, L.1
Aggarwal, S.2
Glover, T.W.3
Orringer, M.B.4
Hanash, S.5
Beer, D.G.6
-
23
-
-
38549158349
-
Comprehensive analysis of loss of heterozygosity events in glioblastoma using the 100K SNP mapping arrays and comparison with copy number abnormalities defined by BAC array comparative
-
Lo KC, Bailey D, Burkhardt T, Gardina P, Turpaz Y, Cowell JK. 2008. Comprehensive analysis of loss of heterozygosity events in glioblastoma using the 100K SNP mapping arrays and comparison with copy number abnormalities defined by BAC array comparative. Genes Chromosomes Cancer 47:221-237.
-
(2008)
Genes Chromosomes Cancer
, vol.47
, pp. 221-237
-
-
Lo, K.C.1
Bailey, D.2
Burkhardt, T.3
Gardina, P.4
Turpaz, Y.5
Cowell, J.K.6
-
25
-
-
79955166265
-
GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers
-
Mermel CH, Schumacher SE, Hill B, Meyerson ML, Beroukhim R, Getz G. 2011. GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers. Genome Biol 12:R41.
-
(2011)
Genome Biol
, vol.12
-
-
Mermel, C.H.1
Schumacher, S.E.2
Hill, B.3
Meyerson, M.L.4
Beroukhim, R.5
Getz, G.6
-
26
-
-
84864296088
-
Genomic copy-number alterations of MYC and FHIT genes are associated with survival in esophageal squamous-cell carcinoma
-
Miyawaki Y, Kawachi H, Ooi A, Eishi Y, Kawano T, Inazawa J, Imoto I. 2012. Genomic copy-number alterations of MYC and FHIT genes are associated with survival in esophageal squamous-cell carcinoma. Cancer Sci 103:1558-1566.
-
(2012)
Cancer Sci
, vol.103
, pp. 1558-1566
-
-
Miyawaki, Y.1
Kawachi, H.2
Ooi, A.3
Eishi, Y.4
Kawano, T.5
Inazawa, J.6
Imoto, I.7
-
27
-
-
42449097754
-
SiDCoN: A tool to aid scoring of DNA copy number changes in SNP chip data
-
Nancarrow DJ, Handoko HY, Stark MS, Whiteman DC, Hayward NK. 2007. SiDCoN: A tool to aid scoring of DNA copy number changes in SNP chip data. PLoS One 2:e1093.
-
(2007)
PLoS One
, vol.2
-
-
Nancarrow, D.J.1
Handoko, H.Y.2
Stark, M.S.3
Whiteman, D.C.4
Hayward, N.K.5
-
28
-
-
49249119361
-
Genome-wide copy number analysis in esophageal adenocarcinoma using high-density single-nucleotide polymorphism arrays
-
Nancarrow DJ, Handoko HY, Smithers BM, Gotley DC, Drew PA, Watson DI, Clouston AD, Hayward NK, Whiteman DC, Australian Canc Study Study D. 2008. Genome-wide copy number analysis in esophageal adenocarcinoma using high-density single-nucleotide polymorphism arrays. Cancer Res 68:4163-4172.
-
(2008)
Cancer Res
, vol.68
, pp. 4163-4172
-
-
Nancarrow, D.J.1
Handoko, H.Y.2
Smithers, B.M.3
Gotley, D.C.4
Drew, P.A.5
Watson, D.I.6
Clouston, A.D.7
Hayward, N.K.8
Whiteman, D.C.9
Australian Canc Study Study, D.10
-
29
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
Olshen AB, Venkatraman ES, Lucito R, Wigler M. 2004. Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5:557-572.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
Olshen, A.B.1
Venkatraman, E.S.2
Lucito, R.3
Wigler, M.4
-
30
-
-
78649887198
-
Biomarkers in Barrett's esophagus and esophageal adenocarcinoma: Predictors of progression and prognosis
-
Ong CAJ, Lao-Sirieix P, Fitzgerald RC. 2010. Biomarkers in Barrett's esophagus and esophageal adenocarcinoma: Predictors of progression and prognosis. World J Gastroenterol 16:5669-5681.
-
(2010)
World J Gastroenterol
, vol.16
, pp. 5669-5681
-
-
Ong, C.A.J.1
Lao-Sirieix, P.2
Fitzgerald, R.C.3
-
31
-
-
58149166878
-
DNA copy number alterations correlate with survival of esophageal adenocarcinoma patients
-
Pasello G, Agata S, Bonaldi L, Corradin A, Montagna M, Zamarchi R, Parenti A, Cagol M, Zaninotto G, Ruol A, Ancona E, Amadori A, Saggioro D. 2009. DNA copy number alterations correlate with survival of esophageal adenocarcinoma patients. Mod Pathol 22:58-65.
-
(2009)
Mod Pathol
, vol.22
, pp. 58-65
-
-
Pasello, G.1
Agata, S.2
Bonaldi, L.3
Corradin, A.4
Montagna, M.5
Zamarchi, R.6
Parenti, A.7
Cagol, M.8
Zaninotto, G.9
Ruol, A.10
Ancona, E.11
Amadori, A.12
Saggioro, D.13
-
32
-
-
66149185428
-
Chromosomal instability and copy number alterations in Barrett's esophagus and esophageal adenocarcinoma
-
Paulson TG, Maley CC, Li XH, Li H, Sanchez CA, Chao DL, Odze RD, Vaughan TL, Blount PL, Reid BJ. 2009. Chromosomal instability and copy number alterations in Barrett's esophagus and esophageal adenocarcinoma. Clin Cancer Res 15:3305-3314.
-
(2009)
Clin Cancer Res
, vol.15
, pp. 3305-3314
-
-
Paulson, T.G.1
Maley, C.C.2
Li, X.H.3
Li, H.4
Sanchez, C.A.5
Chao, D.L.6
Odze, R.D.7
Vaughan, T.L.8
Blount, P.L.9
Reid, B.J.10
-
33
-
-
33748272115
-
High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping
-
Peiffer DA, Le JM, Steemers FJ, Chang WH, Jenniges T, Garcia F, Haden K, Li JZ, Shaw CA, Belmont J, Cheung SW, Shen RM, Barker DL, Gunderson KL. 2006. High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping. Genome Res 16:1136-1148.
-
(2006)
Genome Res
, vol.16
, pp. 1136-1148
-
-
Peiffer, D.A.1
Le, J.M.2
Steemers, F.J.3
Chang, W.H.4
Jenniges, T.5
Garcia, F.6
Haden, K.7
Li, J.Z.8
Shaw, C.A.9
Belmont, J.10
Cheung, S.W.11
Shen, R.M.12
Barker, D.L.13
Gunderson, K.L.14
-
34
-
-
13744258445
-
The role of overdiagnosis and reclassification in the marked increase of esophageal adenocarcinoma incidence
-
Pohl H, Welch HG. 2005. The role of overdiagnosis and reclassification in the marked increase of esophageal adenocarcinoma incidence. J Natl Cancer Inst 97:142-146.
-
(2005)
J Natl Cancer Inst
, vol.97
, pp. 142-146
-
-
Pohl, H.1
Welch, H.G.2
-
35
-
-
0032586731
-
Prognostic value of Lauren classification and c-erbB-2 oncogene overexpression in adenocarcinoma of the esophagus and gastroesophageal junction
-
Polkowski W, van Sandick JW, Offerhaus GJ, ten Kate FJ, Mulder J, Obertop H, van Lanschot JJ. 1999. Prognostic value of Lauren classification and c-erbB-2 oncogene overexpression in adenocarcinoma of the esophagus and gastroesophageal junction. Ann Surg Oncol 6:290-297.
-
(1999)
Ann Surg Oncol
, vol.6
, pp. 290-297
-
-
Polkowski, W.1
van Sandick, J.W.2
Offerhaus, G.J.3
ten Kate, F.J.4
Mulder, J.5
Obertop, H.6
van Lanschot, J.J.7
-
36
-
-
77954952497
-
7th edition of the AJCC cancer staging manual: Esophagus and esophagogastric junction
-
Rice TW, Blackstone EH, Rusch VW. 2010. 7th edition of the AJCC cancer staging manual: Esophagus and esophagogastric junction. Ann Surg Oncol 17:1721-1724.
-
(2010)
Ann Surg Oncol
, vol.17
, pp. 1721-1724
-
-
Rice, T.W.1
Blackstone, E.H.2
Rusch, V.W.3
-
37
-
-
0035300471
-
Genomic alterations in malignant transformation of Barrett's esophagus
-
Riegman PHJ, Vissers KJ, Alers JC, Geelen E, Hop WCJ, Tilanus HW, van Dekken H. 2001. Genomic alterations in malignant transformation of Barrett's esophagus. Cancer Res 61:3164-3170.
-
(2001)
Cancer Res
, vol.61
, pp. 3164-3170
-
-
Riegman, P.H.J.1
Vissers, K.J.2
Alers, J.C.3
Geelen, E.4
Hop, W.C.J.5
Tilanus, H.W.6
van Dekken, H.7
-
38
-
-
78650359655
-
Expression of Her-2 in carcinomas of the esophagus
-
Schoppmann SF, Jesch B, Friedrich J, Wrba F, Schultheis A, Pluschnig U, Maresch J, Zacherl J, Hejna M, Birner P. 2010. Expression of Her-2 in carcinomas of the esophagus. Am J Surg Pathol 34:1868-1873.
-
(2010)
Am J Surg Pathol
, vol.34
, pp. 1868-1873
-
-
Schoppmann, S.F.1
Jesch, B.2
Friedrich, J.3
Wrba, F.4
Schultheis, A.5
Pluschnig, U.6
Maresch, J.7
Zacherl, J.8
Hejna, M.9
Birner, P.10
-
39
-
-
85047699455
-
Global gene expression profiling in Barrett's esophagus and esophageal cancer: A comparative analysis using cDNA microarrays
-
Selaru FM, Zou T, Xu Y, Shustova V, Yin J, Mori Y, Sato F, Wang S, Olaru A, Shibata D, Greenwald BD, Krasna MJ, Abraham JM, Meltzer SJ. 2002. Global gene expression profiling in Barrett's esophagus and esophageal cancer: A comparative analysis using cDNA microarrays. Oncogene 21:475-478.
-
(2002)
Oncogene
, vol.21
, pp. 475-478
-
-
Selaru, F.M.1
Zou, T.2
Xu, Y.3
Shustova, V.4
Yin, J.5
Mori, Y.6
Sato, F.7
Wang, S.8
Olaru, A.9
Shibata, D.10
Greenwald, B.D.11
Krasna, M.J.12
Abraham, J.M.13
Meltzer, S.J.14
-
40
-
-
79959572435
-
Survival after neoadjuvant chemotherapy or chemoradiotherapy for resectable oesophageal carcinoma: An updated meta-analysis
-
Australasian Gastro-Intestinal T
-
Sjoquist KM, Burmeister BH, Smithers BM, Zalcberg JR, Simes RJ, Barbour A, Gebski V, Australasian Gastro-Intestinal T. 2011. Survival after neoadjuvant chemotherapy or chemoradiotherapy for resectable oesophageal carcinoma: An updated meta-analysis. Lancet Oncol 12:681-692.
-
(2011)
Lancet Oncol
, vol.12
, pp. 681-692
-
-
Sjoquist, K.M.1
Burmeister, B.H.2
Smithers, B.M.3
Zalcberg, J.R.4
Simes, R.J.5
Barbour, A.6
Gebski, V.7
-
41
-
-
79960988896
-
To DNA or not to DNA? That is the question, when it comes to molecular subtyping for the clinic!
-
Smeets SJ, Harjes U, van Wieringen WN, Sie D, Brakenhoff RH, Meijer GA, Ylstra B. 2011. To DNA or not to DNA? That is the question, when it comes to molecular subtyping for the clinic! Clin Cancer Res 17:4959-4964.
-
(2011)
Clin Cancer Res
, vol.17
, pp. 4959-4964
-
-
Smeets, S.J.1
Harjes, U.2
van Wieringen, W.N.3
Sie, D.4
Brakenhoff, R.H.5
Meijer, G.A.6
Ylstra, B.7
-
43
-
-
58149288422
-
Improving the accuracy of TNM staging in esophageal cancer: A pathological review of resected specimens
-
Thompson SK, Ruszkiewicz AR, Jamieson GG, Esterman A, Watson DI, Wijnhoven BPL, Lamb PJ, Devitt PG. 2008. Improving the accuracy of TNM staging in esophageal cancer: A pathological review of resected specimens. Ann Surg Oncol 15:3447-3458.
-
(2008)
Ann Surg Oncol
, vol.15
, pp. 3447-3458
-
-
Thompson, S.K.1
Ruszkiewicz, A.R.2
Jamieson, G.G.3
Esterman, A.4
Watson, D.I.5
Wijnhoven, B.P.L.6
Lamb, P.J.7
Devitt, P.G.8
-
44
-
-
80051549783
-
HER-2/neu gene amplification in esophageal adenocarcinoma and its influence on survival
-
Thompson SK, Sullivan TR, Davies R, Ruszkiewicz AR. 2011. HER-2/neu gene amplification in esophageal adenocarcinoma and its influence on survival. Ann Surg Oncol 18:2010-2017.
-
(2011)
Ann Surg Oncol
, vol.18
, pp. 2010-2017
-
-
Thompson, S.K.1
Sullivan, T.R.2
Davies, R.3
Ruszkiewicz, A.R.4
-
45
-
-
0037137519
-
A gene-expression signature as a predictor of survival in breast cancer
-
van de Vijver MJ, He YD, van't Veer LJ, Dai H, Hart AAM, Voskuil DW, Schreiber GJ, Peterse JL, Roberts C, Marton MJ, Parrish M, Atsma D, Witteveen A, Glas A, Delahaye L, van der Velde T, Bartelink H, Rodenhuis S, Rutgers ET, Friend SH, Bernards R. 2002. A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 347:1999-2009.
-
(2002)
N Engl J Med
, vol.347
, pp. 1999-2009
-
-
van de Vijver, M.J.1
He, Y.D.2
van't Veer, L.J.3
Dai, H.4
Hart, A.A.M.5
Voskuil, D.W.6
Schreiber, G.J.7
Peterse, J.L.8
Roberts, C.9
Marton, M.J.10
Parrish, M.11
Atsma, D.12
Witteveen, A.13
Glas, A.14
Delahaye, L.15
van der Velde, T.16
Bartelink, H.17
Rodenhuis, S.18
Rutgers, E.T.19
Friend, S.H.20
Bernards, R.21
more..
-
46
-
-
0035333654
-
DNA copy number profiling in esophageal Barrett adenocarcinoma: Comparison with gastric adenocarcinoma and esophageal squamous cell carcinoma
-
Varis A, Puolakkainen P, Savolainen H, Kokkola A, Salo J, Nieminen O, Nordling S, Knuutila S. 2001. DNA copy number profiling in esophageal Barrett adenocarcinoma: Comparison with gastric adenocarcinoma and esophageal squamous cell carcinoma. Cancer Genet Cytogenet 127:53-58.
-
(2001)
Cancer Genet Cytogenet
, vol.127
, pp. 53-58
-
-
Varis, A.1
Puolakkainen, P.2
Savolainen, H.3
Kokkola, A.4
Salo, J.5
Nieminen, O.6
Nordling, S.7
Knuutila, S.8
-
47
-
-
0033899382
-
Chromosomal imbalances in Barrett's adenocarcinoma and the metaplasia-dysplasia-carcinoma sequence
-
Walch AK, Zitzelsberger HF, Bruch J, Keller G, Angermeier D, Aubele MM, Mueller J, Stein H, Braselmann H, Siewert JR, Hofler H, Werner M. 2000. Chromosomal imbalances in Barrett's adenocarcinoma and the metaplasia-dysplasia-carcinoma sequence. Am J Pathol 156:555-566.
-
(2000)
Am J Pathol
, vol.156
, pp. 555-566
-
-
Walch, A.K.1
Zitzelsberger, H.F.2
Bruch, J.3
Keller, G.4
Angermeier, D.5
Aubele, M.M.6
Mueller, J.7
Stein, H.8
Braselmann, H.9
Siewert, J.R.10
Hofler, H.11
Werner, M.12
-
48
-
-
2442684455
-
Gene expression profiles and molecular markers to predict recurrence of Dukes' B colon cancer
-
Wang Y, Jatkoe T, Zhang Y, Mutch MG, Talantov D, Jiang J, McLeod HL, Atkins D. 2004. Gene expression profiles and molecular markers to predict recurrence of Dukes' B colon cancer. J Clin Oncol 22:1564-1571.
-
(2004)
J Clin Oncol
, vol.22
, pp. 1564-1571
-
-
Wang, Y.1
Jatkoe, T.2
Zhang, Y.3
Mutch, M.G.4
Talantov, D.5
Jiang, J.6
McLeod, H.L.7
Atkins, D.8
-
49
-
-
0037317870
-
Barrett's adenocarcinomas resemble adenocarcinomas of the gastric cardia in terms of chromosomal copy number changes, but relate to squamous cell carcinomas of the distal oesophagus with respect to the presence of high-level amplifications
-
Weiss MM, Kuipers EJ, Hermsen MA, van Grieken NC, Offerhaus J, Baak JP, Meuwissen SG, Meijer GA. 2003. Barrett's adenocarcinomas resemble adenocarcinomas of the gastric cardia in terms of chromosomal copy number changes, but relate to squamous cell carcinomas of the distal oesophagus with respect to the presence of high-level amplifications. J Pathol 199:157-165.
-
(2003)
J Pathol
, vol.199
, pp. 157-165
-
-
Weiss, M.M.1
Kuipers, E.J.2
Hermsen, M.A.3
van Grieken, N.C.4
Offerhaus, J.5
Baak, J.P.6
Meuwissen, S.G.7
Meijer, G.A.8
-
50
-
-
63449134637
-
Genome-wide analysis of genetic alterations in Barrett's adenocarcinoma using single nucleotide polymorphism arrays
-
Wiech T, Nikolopoulos E, Weis R, Langer R, Bartholome K, Timmer J, Walch AK, Hofler H, Werner M. 2009. Genome-wide analysis of genetic alterations in Barrett's adenocarcinoma using single nucleotide polymorphism arrays. Lab Invest 89:385-397.
-
(2009)
Lab Invest
, vol.89
, pp. 385-397
-
-
Wiech, T.1
Nikolopoulos, E.2
Weis, R.3
Langer, R.4
Bartholome, K.5
Timmer, J.6
Walch, A.K.7
Hofler, H.8
Werner, M.9
-
51
-
-
84872354372
-
Runt-related transcription factor 1 (RUNX1) stimulates tumor suppressor p53 in response to DNA damage through complex formation and acetylation
-
Wu D, Ozaki T, Yoshihara Y, Kubo N, Nakagawara A. 2012. Runt-related transcription factor 1 (RUNX1) stimulates tumor suppressor p53 in response to DNA damage through complex formation and acetylation. J Biol Chem 288:1353-1364.
-
(2012)
J Biol Chem
, vol.288
, pp. 1353-1364
-
-
Wu, D.1
Ozaki, T.2
Yoshihara, Y.3
Kubo, N.4
Nakagawara, A.5
|