Predicting substrate specificity of adenylation domains of nonribosomal peptide synthetases and other protein properties by latent semantic indexing

Journal of Industrial Microbiology and Biotechnology

Volumn 41, Issue 2, 2014, Pages 461-467

  Baranašić, Damir ^a,c   Zucko, Jurica ^a   Diminic, Janko ^a   Gacesa, Ranko ^a   Long, Paul F ^b   Cullum, John ^c   Hranueli, Daslav ^a   Starcevic, Antonio ^a  

^a UNIVERSITY OF ZAGREB   (Croatia)

^b KING'S COLLEGE LONDON   (United Kingdom)

^c France   (Germany)

Author keywords

Adenylation domains; Functional subtype; LSI; NRPS; Protein tokenization

Indexed keywords

ACYLTRANSFERASE; ALANINE; LACTATE DEHYDROGENASE; NONRIBOSOMAL PEPTIDE SYNTHETASE; OLIGOPEPTIDE; OXIDOREDUCTASE; PROTEIN KINASE;

ADENYLATION; AMINO ACID SEQUENCE; ARTICLE; AUTOMATION; DOCUMENTATION; ENZYME SPECIFICITY; LATENT SEMANTIC INDEXING; PROTEIN FAMILY; PROTEIN FUNCTION; SEQUENCE ALIGNMENT; STANDARD; SUPPORT VECTOR MACHINE;

AMINO ACIDS; CATALYTIC DOMAIN; PEPTIDE SYNTHASES; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SUBSTRATE SPECIFICITY;

EID: 84893481062     PISSN: 13675435     EISSN: 14765535     Source Type: Journal    
DOI: 10.1007/s10295-013-1322-2     Document Type: Article

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