Guanidinium functionalized superparamagnetic silica spheres for selective enrichment of phosphopeptides and intact phosphoproteins from complex mixtures

Journal of Materials Chemistry B

Volumn 2, Issue 8, 2014, Pages 1048-1058

  Deng, Qiliang ^a   Wu, Jianhua ^a   Chen, Yang ^a   Zhang, Zhijun ^a   Wang, Yang ^a   Fang, Guozhen ^a   Wang, Shuo ^a   Zhang, Yukui ^b  

^a TIANJIN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b DALIAN INSTITUTE OF CHEMICAL PHYSICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL PROCESS; ENRICHMENT TECHNIQUES; PHOSPHOPEPTIDE ENRICHMENT; PHOSPHORYLATED PROTEINS; RESULTING MATERIALS; SELECTIVE ENRICHMENT; SUPERPARAMAGNETIC MICROSPHERES; SYSTEMATIC IDENTIFICATION;

IRON COMPOUNDS; MIXTURES; PHOSPHORYLATION; SILANES; SUPERPARAMAGNETISM;

PROTEINS;

EID: 84893430737     PISSN: 20507518     EISSN: 2050750X     Source Type: Journal    
DOI: 10.1039/c3tb21540g     Document Type: Article

References (22)

1. P. Cohen The origins of protein phosphorylation Nat. Cell Biol. 2002 4 127 130
2. N. Dephoure C. Zhou J. Villén S.-A. Beausoleil C.-E. Bakalarski S.-J. Elledge S.-P. Gygi A quantitative atlas of mitotic phosphorylation Proc. Natl. Acad. Sci. U. S. A. 2008 105 10762 10767
3. I.-L. Batalha C.-R. Lowe A.-C.-A. Roque Platforms for enrichment of phosphorylated proteins and peptides in proteomics Trends Biotechnol. 2012 30 100 110
4. B. Salovska A. Tichy M. Rezacova J. Vavrova E. Novotna Enrichment strategies for phosphoproteomics: state-of-the-art Rev. Anal. Chem. 2012 31 29 41
5. A. Tichy B. Salovska P. Rehulka J. Klimentova J. Vavrova J. Stulik L. Hernychova Phosphoproteomics: Searching for a needle in a haystack Proteomics 2011 74 2786 2797
6. M. Lenman C. Sörensson E. Andreasson Enrichment of Phosphoproteins and Phosphopeptide Derivatization Identify Universal Stress Proteins in Elicitor-Treated Arabidopsis Mol. Plant-Microbe Interact. 2008 21 1275 1284
7. M. Machida H. Kosako K. Shirakabe M. Kobayashi M. Ushiyama J. Inagawa J. Hirano T. Nakano Y. Bando E. Nishida S. Hattori Purification of phosphoproteins by immobilitized metal affinity chromatography and its application to phosphoproteome analysis FEBS J. 2007 274 1576 1587
8. I.-S. Sheoran A.-R.-S. Ross D.-J.-H. Olson V.-K. Sawhney Compatibility of plant protein extraction methods with mass spectrometry for proteome analysis Plant Sci. 2009 176 99 104
9. R. Krüger F. Wolschin W. Weckwerth J. Bettmer W.-D. Lehmann Plant protein phosphorylation monitored by capillary liquid chromatography-element mass spectrometry Biochem. Biophys. Res. Commun. 2007 355 89 96
10. 2 Nanocrystal Clusters for Selective Enrichment of Intact Phosphorylated Proteins Angew. Chem. Int. Ed. 2010 49 1862 1866
11. A. Dubrovska S. Souchelnytskyi Efficient enrichment of intact phosphorylated proteins by modified immobilized metal-affinity chromatography Proteomics 2005 5 4678 4683
12. G.-C. Adam E.-J. Sorensen B.-F. Cravatt Chemical Strategies for Functional Proteomics Mol. Cell. Proteomics 2002 1 781 790
13. M.-D. Best S.-L. Tobey E.-V. Anslyn Abiotic guanidinium containing receptors for anionic species Coord. Chem. Rev. 2003 240 3 15
14. P. Blondeau M. Segura R. Pérez-Fernández J.-D. Mendoza Molecular recognition of oxoanions based on guanidinium receptors Chem. Soc. Rev. 2007 36 198 210
15. D.-W. Christianson W.-N. Lipscomb Carboxypeptidase A Acc. Chem. Res. 1989 22 62 69
16. F.-A. Cotton E.-E.-J. Hazen M. J. Legg Staphylococcal nuclease: proposed mechanism of action based on structure of enzyme-thymidine 3′,5′- bisphosphate-calcium ion complex at 1.5 Å resolution Proc. Natl. Acad. Sci. U. S. A. 1979 76 2551 2556
17. E.-E. Kim H.-W. Wyckoff Reaction mechanism of alkaline phosphatase based on crystal structures: Two-metal ion catalysis J. Mol. Biol. 1991 218 449 464
18. A.-S. Woods S. Ferré Amazing Stability of the Arginine-Phosphate Electrostatic Interaction J. Proteome Res. 2005 4 1397 1402
19. B.-J. Calnan B. Tidor S. Biancalana D. Hudson A.-D. Frankel Arginine-Mediated RNA Recognition: The Arginine Fork Science 1991 252 1167 1171
20. H. Deng X.-L. Li Q. Peng X. Wang J.-P. Chen Y.-D. Li Monodisperse Magnetic Single-Crystal Ferrite Microspheres Angew. Chem. Int. Ed. 2005 44 2782 2785
21. X.-W. Kan Q. Zhao D.-L. Shao Z.-R. Geng Z.-L. Wang J.-J. Zhu Preparation and Recognition Properties of Bovine Hemoglobin Magnetic Molecularly Imprinted Polymers J. Phys. Chem. 2010 114 3999 4004
22. W.-H. Jin J. Dai H. Zhou Q. C. Xia H.-F. Zou R. Zeng Phosphoproteome Analysis of Mouse Liver using Immobilized Metal Affinity Purification and Linear Ion Trap Mass Spectrometry Rapid Commun. Mass Spectrom. 2004 18 2169 2176