Arbuscular mycorrhizal fungal networks vary throughout the growing season and between successional stages

PLoS ONE

Volumn 8, Issue 12, 2013, Pages

  Bennett, Alison Elizabeth ^a   Daniell, Tim John ^a   Öpik, Maarja ^b   Davison, John ^b   Moora, Mari ^b   Zobel, Martin ^b   Selosse, Marc André ^c   Evans, Darren ^d  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

^b UNIVERSITY OF TARTU   (Estonia)

^c MUSÉUM NATIONAL D'HISTOIRE NATURELLE   (France)

^d UNIVERSITY OF HULL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ARBUSCULAR MYCORRHIZA; ARTICLE; COMMUNITY SUCCESSION; FUNGAL COMMUNITY; GROWING SEASON; NONHUMAN; PLANT FUNGUS INTERACTION; SYMBIOSIS;

ECOSYSTEM; EXTINCTION, BIOLOGICAL; MYCORRHIZAE; PLANT DEVELOPMENT; PLANTS; SEASONS; SYMBIOSIS; TREES;

EID: 84892922741     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0083241     Document Type: Article

References (59)

1. Tylianakis JM, Tscharntke T, Lewis OT (2007) Habitat modification alters the structure of tropical host-parasitoid food webs. Nature 445: 202-205.
2. Bascompte J, Jordano P (2007) Plant-animal mutualistic networks: The architecture of biodiversity. Annual Review of Ecology Evolution and Systematics 38: 567-593.
3. Albrecht M, Riesen M, Schmid B (2010) Plant-pollinator network assembly along the chronosequence of a glacier foreland. Oikos 119: 1610-1624.
4. Eiler A, Heinrich F, Bertilsson S (2012) Coherent dynamics and association networks among lake bacterioplankton taxa. ISME Journal 6: 330-342.
5. Raymond B, Hosie G (2009) Network-based exploration and visualisation of ecological data. Ecological Modelling 220: 673-683.
6. Díaz-Castelazo C, Guimarães PR, Jordano P, Thompson JN, Marquis RJ, et al. (2010) Changes of a mutualistic network over time: reanalysis over a 10-year period. Ecology 91: 793-801.
7. Olesen JM, Bascompte J, Elberling H, Jordano P (2008) Temporal dynamics in a pollination network. Ecology 89: 1573-1582.
8. Vacher C, Piou D, Desprez-Loustau ML (2008) Architecture of an antagonistic tree/fungus network: The asymmetric influence of past evolutionary history. PLoS ONE 3: e1740.
9. Donatti CI, Guimarães PR, Galetti M, Pizo MA, Marquitti FMD, et al. (2011) Analysis of a hyper-diverse seed dispersal network: modularity and underlying mechanisms. Ecology Letters 14: 773-781.
10. Basilio AM, Medan D, Torretta JP, Bartoloni NJ (2006) A year-long plant-pollinator network. Austral Ecology 31: 975-983.
11. Medan D, Basilio AM, Devoto M, Bartoloni NJ, Torretta JP, et al. (2006) Measuring generalization and connectance in temperate, long-lasting systems. In: Waser NM, Ollerton J, Plant-pollinator interactions: From specialization to generalization. Chicago: University of Chicago Press. pp. 245-259.
12. Dunne JA, Williams RJ, Martinez ND (2002) Food-web structure and network theory: The role of connectance and size. Proceedings of the National Academy of Sciences of the United States of America 99: 12917-12922.
13. Uibopuu A, Moora M, Saks Ü, Daniell T, Zobel M, et al. (2009) Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species. Soil Biology & Biochemistry 41: 2141-2146.
14. Davison J, Öpik M, Daniell TJ, Moora M, Zobel M (2011) Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiology Ecology 78: 103-115.
15. Dumbrell AJ, Nelson M, Helgason T, Dytham C, Fitter AH (2010) Relative roles of niche and neutral processes in structuring a soil microbial community. ISME Journal 4: 337-345.
16. Öpik M, Metsis M, Daniell TJ, Zobel M, Moora M (2009) Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest. New Phytologist 184: 424-437.
17. Smith SE, Read DJ (2008) Mycorrhizal symbiosis. New York: Academic Press.
18. Öpik M, Moora M, Zobel M, Saks Ü, Wheatley R, et al. (2008) High diversity of arbuscular mycorrhizal fungi in a boreal herb-rich coniferous forest. New Phytologist 179: 867-876.
19. Selosse MA, Le Tacon F (1998) The land flora: a phototroph-fungus partnership? Trends in Ecology & Evolution 13: 15-20.
20. Bever JD, Dickie IA, Facelli E, Facelli JM, Klironomos J, et al. (2010) Rooting theories of plant community ecology in microbial interactions. Trends in Ecology & Evolution 25: 468-478.
21. Borowicz VA (2001) Do arbuscular mycorrhizal fungi alter plant-pathogen relations? Ecology 82: 3057-3068.
22. Chaudhary VB, Lau MK, Johnson NC (2008) Macroecology of microbes - Biogeography of the Glomeromycota. In: Varma A, Mycorrhiza. Berlin: Springer. pp. 529-562.
23. Selosse MA, Richard F, He XH, Simard SW (2006) Mycorrhizal networks: des liaisons dangereuses? Trends in Ecology & Evolution 21: 621-628.
24. Liu Y, He L, An LZ, Helgason T, Feng HY (2009) Arbuscular mycorrhizal dynamics in a chronosequence of Caragana korshinskii plantations. FEMS Microbiology Ecology 67: 81-92.
25. Oehl F, Sieverding E, Ineichen K, Mäder P, Boller T, et al. (2003) Impact of land use intensity on the species diversity of arbuscular mycorrhizal fungi in agroecosystems of Central Europe. Applied and Environmental Microbiology 69: 2816-2824.
26. Daniell TJ, Husband R, Fitter AH, Young JPW (2001) Molecular diversity of arbuscular mycorrhizal fungi colonising arable crops. FEMS Microbiology Ecology 36: 203-209.
27. Oehl F, Schneider D, Sieverding E, Burga CA (2011) Succession of arbuscular mycorrhizal communities in the foreland of the retreating Morteratsch glacier in the Central Alps. Pedobiologia 54: 321-331.
28. Covacevich F, Berbara RLL (2011) Indigenous arbuscular mycorrhizae in areas with different successional stages at a tropical dry forest biome in Brazil. African Journal of Microbiology Research 5: 2697-2705.
29. Montesinos-Navarro A, Segarra-Moragues JG, Valiente-Banuet A, Verdu M (2012) The network structure of plant-arbuscular mycorrhizal fungi. New Phytologist 194: 536-547.
30. Chagnon PL, Bradley RL, Klironomos JN (2012) Using ecological network theory to evaluate the causes and consequences of arbuscular mycorrhizal community structure. New Phytologist 194: 307-312.
31. Moora M, Daniell T, Kalle H, Liira J, Püssa K, et al. (2007) Spatial pattern and species richness of boreonemoral forest understorey and its determinants - A comparison of diffirently managed forests. Forest Ecology and Management 250: 64-70.
32. Koorem K, Saks Ü, Söber V, Uibopuu A, Öpik M, et al. (2012) Effects of arbuscular mycorrhiza on community composition and seedling recruitment in temperate forest understory. Basic and Applied Ecology 13: 663-672.
33. Moora M, Öpik M, Zobel K, Zobel M (2009) Understory plant diversity is related to higher variability of vegetative mobility of coexisting species. Oecologia 159: 355-361.
34. Aavik T, Püssa K, Roosaluste E, Moora M (2009) Vegetation change in boreonemoral forest during succession - trends in species composition, richness and differentiation diversity. Annales Botanici Fennici 46: 326-335.
35. Koorem K, Moora M (2010) Positive association between understory species richness and a dominant shrub species (Corylus avellana) in a boreonemoral spruce forest. Forest Ecology and Management 260: 1407-1413.
36. Milne I, Wright F, Rowe G, Marshall DF, Husmeier D, et al. (2004) TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments. Bioinformatics 20: 1806-1807.
37. Öpik M, Vanatoa A, Vanatoa E, Moora M, Davison J, et al. (2010) The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota). New Phytologist 188: 223-241.
38. Ugland KI, Gray JS, Ellingsen KE (2003) The species-accumulation curve and estimation of species richness. Journal of Animal Ecology 72: 888-897.
39. Oksanen J, Blanchet GF, Kindt R, Legendre P, Minchin PR, et al. (2012) vegan: Community Ecology Package. 2.0-4 ed: R.
40. Chao A (1987) Estimating the population size for capture-recapture data with unequal catchability. Biometrics 43: 783-791.
41. Blüthgen N (2010) Why network analysis is often disconnected from community ecology: A critique and an ecologist's guide. Basic and Applied Ecology 11: 185-195.
42. Tylianakis JM, Laliberté E, Nielsen A, Bascompte J (2010) Conservation of species interaction networks. Biological Conservation 143: 2270-2279.
43. Blüthgen N, Menzel F, Blüthgen N (2006) Measuring specialization in species interaction networks. BMC Ecology 6: 9.
44. Olesen JM, Stefanescu C, Traveset A (2011) Strong, long-term temporal dynamics of an ecological network. PLoS One 6.
45. Memmott J, Waser NM, Price MV (2004) Tolerance of pollination networks to species extinctions. Proceedings of the Royal Society B-Biological Sciences 271: 2605-2611.
46. Sanders IR (2004) Plant and arbuscular mycorrhizal fungal diversity - are we looking at the relevant levels of diversity and are we using the right techniques? New Phytologist 164: 415-418.
47. Kuuluvainen T (2009) Forest management and biodiversity conservation based on natural ecosystem dynamics in Northern Europe: The complexity challenge. Ambio 38: 309-315.
48. Clavel J, Julliard R, Devictor V (2011) Worldwide decline of specialist species: toward a global functional homogenization? Frontiers in Ecology and the Environment 9: 222-228.
49. Sanders IR (2010) 'Designer' mycorrhizas?: Using natural genetic variation in AM fungi to increase plant growth. ISME Journal 4: 1081-1083.
50. Johnson NC, Copeland PJ, Crookston RK, Pfleger FL (1992) Mycorrhizae: Possible explanation for yield decline with continuous corn and soybean. Agronomy Journal 84: 387-390.
51. Moora M, Berger S, Davison J, Öpik M, Bommarco R, et al. (2011) Alien plants associate with widespread generalist arbuscular mycorrhizal fungal taxa: evidence from a continental-scale study using massively parallel 454 sequencing. Journal of Biogeography 38: 1305-1317.
52. Richardson DM, Allsopp N, D'Antonio CM, Milton SJ, Rejmanek M (2000) Plant invasions - the role of mutualisms. Biological Reviews 75: 65-93.
53. Hart MM, Reader RJ (2002) Taxonomic basis for variation in the colonization strategy of arbuscular mycorrhizal fungi. New Phytologist 153: 335-344.
54. Lekberg Y, Hammer EC, Olsson PA (2010) Plants as resource islands and storage units - adopting the mycocentric view of arbuscular mycorrhizal networks. Fems Microbiology Ecology 74: 336-345.
55. Heinemeyer A, Fitter AH (2004) Impact of temperature on the arbuscular mycorrhizal (AM) symbiosis: growth responses of the host plant and its AM fungal partner. Journal of Experimental Botany 55: 525-534.
56. Dumbrell AJ, Ashton PD, Aziz N, Feng G, Nelson M, et al. (2011) Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing. New Phytologist 190: 794-804.
57. Vázquez DP, Chacoff NP, Cagnolo L (2009) Evaluating multiple determinants of the structure of plant-animal mutualistic networks. Ecology 90: 2039-2046.
58. Davison J, Opik M, Zobel M, Vasar M, Metsis M, et al. (2012) Communities of arbuscular mycorrhizal fungi detected in forest soil are spatially heterogeneous but do not vary throughout the growing season. PLoS One 7.
59. Gehring C, Bennett A (2009) Mycorrhizal fungal-plant-insect interactions: The importance of a community approach. Environmental Entomology 38: 93-102.