-
1
-
-
84862682521
-
Targeted disruption of exogenous EGFP gene in medaka using zinc-finger nucleases
-
Ansai, S., Ochiai, H., Kanie, Y., Kamei, Y., Gou, Y., Kitano, T., Yamamoto, T. & Kinoshita, M. 2012. Targeted disruption of exogenous EGFP gene in medaka using zinc-finger nucleases. Dev. Growth Differ. 54, 546-556.
-
(2012)
Dev. Growth Differ.
, vol.54
, pp. 546-556
-
-
Ansai, S.1
Ochiai, H.2
Kanie, Y.3
Kamei, Y.4
Gou, Y.5
Kitano, T.6
Yamamoto, T.7
Kinoshita, M.8
-
2
-
-
84876447739
-
Efficient targeted mutagenesis in medaka using custom-designed transcription activator-like effector nucleases
-
Ansai, S., Sakuma, T., Yamamoto, T., Ariga, H., Uemura, N., Takahashi, R. & Kinoshita, M. 2013. Efficient targeted mutagenesis in medaka using custom-designed transcription activator-like effector nucleases. Genetics 193, 739-749.
-
(2013)
Genetics
, vol.193
, pp. 739-749
-
-
Ansai, S.1
Sakuma, T.2
Yamamoto, T.3
Ariga, H.4
Uemura, N.5
Takahashi, R.6
Kinoshita, M.7
-
3
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch, J., Scholze, H., Schornack, S., Landgraf, A., Hahn, S., Kay, S., Lahaye, T., Nickstadt, A. & Bonas, U. 2009. Breaking the code of DNA binding specificity of TAL-type III effectors. Science 326, 1509-1512.
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
4
-
-
80051535219
-
Genome engineering with zinc-finger nucleases
-
Carroll, D. 2011. Genome engineering with zinc-finger nucleases. Genetics 188, 773-782.
-
(2011)
Genetics
, vol.188
, pp. 773-782
-
-
Carroll, D.1
-
5
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
Cermak, T., Doyle, E. L., Christian, M., Wang, L., Zhang, Y., Schmidt, C., Baller, J. A., Somia, N. V., Bogdanove, A. J. & Voytas, D. F. 2011. Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res. 39, e82.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
Wang, L.4
Zhang, Y.5
Schmidt, C.6
Baller, J.A.7
Somia, N.V.8
Bogdanove, A.J.9
Voytas, D.F.10
-
6
-
-
84867700973
-
Efficient detection, quantification and enrichment of subtle allelic alterations
-
Chen, J., Zhang, X., Wang, T., Li, Z., Guan, G. & Hong, Y. 2012. Efficient detection, quantification and enrichment of subtle allelic alterations. DNA Res. 19, 423-433.
-
(2012)
DNA Res.
, vol.19
, pp. 423-433
-
-
Chen, J.1
Zhang, X.2
Wang, T.3
Li, Z.4
Guan, G.5
Hong, Y.6
-
7
-
-
84866156176
-
Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome
-
Dahlem, T. J., Hoshijima, K., Jurynec, M. J., Gunther, D., Starker, C. G., Locke, A. S., Weis, A. M., Voytas, D. F. & Grunwald, D. J. 2012. Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome. PLoS Genet. 8, e1002861.
-
(2012)
PLoS Genet.
, vol.8
-
-
Dahlem, T.J.1
Hoshijima, K.2
Jurynec, M.J.3
Gunther, D.4
Starker, C.G.5
Locke, A.S.6
Weis, A.M.7
Voytas, D.F.8
Grunwald, D.J.9
-
8
-
-
84864475122
-
TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction
-
Doyle, E. L., Booher, N. J., Standage, D. S., Voytas, D. F., Brendel, V. P., Vandyk, J. K. & Bogdanove, A. J. 2012. TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction. Nucleic Acids Res. 40, W117-W122.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Doyle, E.L.1
Booher, N.J.2
Standage, D.S.3
Voytas, D.F.4
Brendel, V.P.5
Vandyk, J.K.6
Bogdanove, A.J.7
-
9
-
-
40849138178
-
Rescue from oculocutaneous albinism type 4 using medaka slc45a2 cDNA driven by its own promoter
-
Fukamachi, S., Kinoshita, M., Tsujimura, T., Shimada, A., Oda, S., Shima, A., Meyer, A., Kawamura, S. & Mitani, H. 2008. Rescue from oculocutaneous albinism type 4 using medaka slc45a2 cDNA driven by its own promoter. Genetics 178, 761-769.
-
(2008)
Genetics
, vol.178
, pp. 761-769
-
-
Fukamachi, S.1
Kinoshita, M.2
Tsujimura, T.3
Shimada, A.4
Oda, S.5
Shima, A.6
Meyer, A.7
Kawamura, S.8
Mitani, H.9
-
10
-
-
0034928757
-
Mutations in the gene encoding B, a novel transporter protein, reduce melanin content in medaka
-
Fukamachi, S., Shimada, A. & Shima, A. 2001. Mutations in the gene encoding B, a novel transporter protein, reduce melanin content in medaka. Nat. Genet. 28, 381-385.
-
(2001)
Nat. Genet.
, vol.28
, pp. 381-385
-
-
Fukamachi, S.1
Shimada, A.2
Shima, A.3
-
11
-
-
3042514200
-
A systematic genome-wide screen for mutations affecting organogenesis in Medaka, Oryzias latipes
-
Furutani-Seiki, M., Sasado, T., Morinaga, C., Suwa, H., Niwa, K., Yoda, H., Deguchi, T., Hirose, Y., Yasuoka, A., Henrich, T., Watanabe, T., Iwanami, N., Kitagawa, D., Saito, K., Asaka, S., Osakada, M., Kunimatsu, S., Momoi, A., Elmasri, H., Winkler, C., Ramialison, M., Loosli, F., Quiring, R., Carl, M., Grabher, C., Winkler, S., Del Bene, F., Shinomiya, A., Kota, Y., Yamanaka, T., Okamoto, Y., Takahashi, K., Todo, T., Abe, K., Takahama, Y., Tanaka, M., Mitani, H., Katada, T., Nishina, H., Nakajima, N., Wittbrodt, J. & Kondoh, H. 2004. A systematic genome-wide screen for mutations affecting organogenesis in Medaka, Oryzias latipes. Mech. Dev. 121, 647-658.
-
(2004)
Mech. Dev.
, vol.121
, pp. 647-658
-
-
Furutani-Seiki, M.1
Sasado, T.2
Morinaga, C.3
Suwa, H.4
Niwa, K.5
Yoda, H.6
Deguchi, T.7
Hirose, Y.8
Yasuoka, A.9
Henrich, T.10
Watanabe, T.11
Iwanami, N.12
Kitagawa, D.13
Saito, K.14
Asaka, S.15
Osakada, M.16
Kunimatsu, S.17
Momoi, A.18
Elmasri, H.19
Winkler, C.20
Ramialison, M.21
Loosli, F.22
Quiring, R.23
Carl, M.24
Grabher, C.25
Winkler, S.26
Del Bene, F.27
Shinomiya, A.28
Kota, Y.29
Yamanaka, T.30
Okamoto, Y.31
Takahashi, K.32
Todo, T.33
Abe, K.34
Takahama, Y.35
Tanaka, M.36
Mitani, H.37
Katada, T.38
Nishina, H.39
Nakajima, N.40
Wittbrodt, J.41
Kondoh, H.42
more..
-
12
-
-
84965029394
-
Quantitative assay for TALEN activity at endogenous genomic loci
-
Hisano, Y., Ota, S., Arakawa, K., Muraki, M., Kono, N., Oshita, K., Sakuma, T., Tomita, M., Yamamoto, T., Okada, Y. & Kawahara, A. 2013. Quantitative assay for TALEN activity at endogenous genomic loci. Biol. Open 2, 363-367.
-
(2013)
Biol. Open
, vol.2
, pp. 363-367
-
-
Hisano, Y.1
Ota, S.2
Arakawa, K.3
Muraki, M.4
Kono, N.5
Oshita, K.6
Sakuma, T.7
Tomita, M.8
Yamamoto, T.9
Okada, Y.10
Kawahara, A.11
-
13
-
-
79961185942
-
Heritable gene targeting in zebrafish using customized TALENs
-
Huang, P., Xiao, A., Zhou, M., Zhu, Z., Lin, S. & Zhang, B. 2011. Heritable gene targeting in zebrafish using customized TALENs. Nat. Biotechnol. 29, 699-700.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 699-700
-
-
Huang, P.1
Xiao, A.2
Zhou, M.3
Zhu, Z.4
Lin, S.5
Zhang, B.6
-
14
-
-
84871519181
-
TALENs: a widely applicable technology for targeted genome editing
-
Joung, J. K. & Sander, J. D. 2013. TALENs: a widely applicable technology for targeted genome editing. Nat. Rev. Mol. Cell Biol. 14, 49-55.
-
(2013)
Nat. Rev. Mol. Cell Biol.
, vol.14
, pp. 49-55
-
-
Joung, J.K.1
Sander, J.D.2
-
15
-
-
0033794439
-
Activity of the medaka translation elongation factor 1alpha-A promoter examined using the GFP gene as a reporter
-
Kinoshita, M., Kani, S., Ozato, K. & Wakamatsu, Y. 2000. Activity of the medaka translation elongation factor 1alpha-A promoter examined using the GFP gene as a reporter. Dev. Growth Differ. 42, 469-478.
-
(2000)
Dev. Growth Differ.
, vol.42
, pp. 469-478
-
-
Kinoshita, M.1
Kani, S.2
Ozato, K.3
Wakamatsu, Y.4
-
16
-
-
84891583731
-
-
Wiley-Blackwell, Ames, IA.
-
Kinoshita, M., Murata, K., Naruse, K. & Tanaka, M. 2009. Medaka: Biology, Management, and Experiment Protocols. Wiley-Blackwell, Ames, IA.
-
(2009)
Medaka: Biology, Management, and Experiment Protocols
-
-
Kinoshita, M.1
Murata, K.2
Naruse, K.3
Tanaka, M.4
-
17
-
-
84857029597
-
The crystal structure of TAL effector PthXo1 bound to its DNA target
-
Mak, A. N., Bradley, P., Cernadas, R. A., Bogdanove, A. J. & Stoddard, B. L. 2012. The crystal structure of TAL effector PthXo1 bound to its DNA target. Science 335, 716-719.
-
(2012)
Science
, vol.335
, pp. 716-719
-
-
Mak, A.N.1
Bradley, P.2
Cernadas, R.A.3
Bogdanove, A.J.4
Stoddard, B.L.5
-
18
-
-
54849404458
-
MMEJ repair of double-strand breaks (director's cut): deleted sequences and alternative endings
-
McVey, M. & Lee, S. E. 2008. MMEJ repair of double-strand breaks (director's cut): deleted sequences and alternative endings. Trends Genet. 24, 529-538.
-
(2008)
Trends Genet.
, vol.24
, pp. 529-538
-
-
McVey, M.1
Lee, S.E.2
-
19
-
-
79551685675
-
A TALE nuclease architecture for efficient genome editing
-
Miller, J. C., Tan, S., Qiao, G., Barlow, K.A., Wang, J., Xia, D.F., Meng, X., Paschon, D.E., Leung, E., Hinkley, S.J., Dulay, G.P., Hua, K.L., Ankoudinova, I., Cost, G.J., Urnov, F.D., Zhang, H.S., Holmes, M.C., Zhang, L., Gregory, P.D. & Rebar, E.J. 2011. A TALE nuclease architecture for efficient genome editing. Nat. Biotechnol. 29, 143-148.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 143-148
-
-
Miller, J.C.1
Tan, S.2
Qiao, G.3
Barlow, K.A.4
Wang, J.5
Xia, D.F.6
Meng, X.7
Paschon, D.E.8
Leung, E.9
Hinkley, S.J.10
Dulay, G.P.11
Hua, K.L.12
Ankoudinova, I.13
Cost, G.J.14
Urnov, F.D.15
Zhang, H.S.16
Holmes, M.C.17
Zhang, L.18
Gregory, P.D.19
Rebar, E.J.20
more..
-
20
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou, M. J. & Bogdanove, A. J. 2009. A simple cipher governs DNA recognition by TAL effectors. Science 326, 1501.
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
21
-
-
80053039555
-
A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity
-
Mussolino, C., Morbitzer, R., Lütge, F., Dannemann, N., Lahaye, T. & Cathomen, T. 2011. A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity. Nucleic Acids Res. 39, 9283-9293.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 9283-9293
-
-
Mussolino, C.1
Morbitzer, R.2
Lütge, F.3
Dannemann, N.4
Lahaye, T.5
Cathomen, T.6
-
22
-
-
84878349760
-
Efficient identification of TALEN-mediated genome modifications using heteroduplex mobility assays
-
Ota, S., Hisano, Y., Muraki, M., Hoshijima, K., Dahlem, T. J., Grunwald, D. J., Okada, Y. & Kawahara, A. 2013. Efficient identification of TALEN-mediated genome modifications using heteroduplex mobility assays. Genes Cells 18, 450-458.
-
(2013)
Genes Cells
, vol.18
, pp. 450-458
-
-
Ota, S.1
Hisano, Y.2
Muraki, M.3
Hoshijima, K.4
Dahlem, T.J.5
Grunwald, D.J.6
Okada, Y.7
Kawahara, A.8
-
23
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon, D., Tsai, S. Q., Khayter, C., Foden, J. A., Sander, J. D. & Joung, J. K. 2012. FLASH assembly of TALENs for high-throughput genome editing. Nat. Biotechnol. 30, 460-465.
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khayter, C.3
Foden, J.A.4
Sander, J.D.5
Joung, J.K.6
-
24
-
-
77955737033
-
Promoter elements of rice susceptibility genes are bound and activated by specific TAL effectors from the bacterial blight pathogen, Xanthomonas oryzae pv. oryzae
-
Römer, P., Recht, S., Strauss, T., Elsaesser, J., Schornack, S., Boch, J., Wang, S. & Lahaye, T. 2010. Promoter elements of rice susceptibility genes are bound and activated by specific TAL effectors from the bacterial blight pathogen, Xanthomonas oryzae pv. oryzae. New Phytol. 187, 1048-1057.
-
(2010)
New Phytol.
, vol.187
, pp. 1048-1057
-
-
Römer, P.1
Recht, S.2
Strauss, T.3
Elsaesser, J.4
Schornack, S.5
Boch, J.6
Wang, S.7
Lahaye, T.8
-
25
-
-
84875618956
-
Efficient TALEN construction and evaluation methods for human cell and animal applications
-
Sakuma, T., Hosoi, S., Woltjen, K., Suzuki, K., Kashiwagi, K., Wada, H., Ochiai, H., Miyamoto, T., Kawai, N., Sasakura, Y., Matsuura, S., Okada, Y., Kawahara, A., Hayashi, S. & Yamamoto, T. 2013. Efficient TALEN construction and evaluation methods for human cell and animal applications. Genes Cells 18, 315-326.
-
(2013)
Genes Cells
, vol.18
, pp. 315-326
-
-
Sakuma, T.1
Hosoi, S.2
Woltjen, K.3
Suzuki, K.4
Kashiwagi, K.5
Wada, H.6
Ochiai, H.7
Miyamoto, T.8
Kawai, N.9
Sasakura, Y.10
Matsuura, S.11
Okada, Y.12
Kawahara, A.13
Hayashi, S.14
Yamamoto, T.15
-
26
-
-
84861170955
-
A transcription activator-like effector toolbox for genome engineering
-
Sanjana, N. E., Cong, L., Zhou, Y., Cunniff, M. M., Feng, G. & Zhang, F. 2012. A transcription activator-like effector toolbox for genome engineering. Nat. Protoc. 7, 171-192.
-
(2012)
Nat. Protoc.
, vol.7
, pp. 171-192
-
-
Sanjana, N.E.1
Cong, L.2
Zhou, Y.3
Cunniff, M.M.4
Feng, G.5
Zhang, F.6
-
27
-
-
78149443392
-
The art of medaka genetics and genomics: what makes them so unique?
-
Takeda, H. & Shimada, A. 2010. The art of medaka genetics and genomics: what makes them so unique? Annu. Rev. Genet. 44, 217-241.
-
(2010)
Annu. Rev. Genet.
, vol.44
, pp. 217-241
-
-
Takeda, H.1
Shimada, A.2
-
28
-
-
77955867185
-
Genome editing with engineered zinc finger nucleases
-
Urnov, F. D., Rebar, E. J., Holmes, M. C., Zhang, H. S. & Gregory, P. D. 2010. Genome editing with engineered zinc finger nucleases. Nat. Rev. Genet. 11, 636-646.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 636-646
-
-
Urnov, F.D.1
Rebar, E.J.2
Holmes, M.C.3
Zhang, H.S.4
Gregory, P.D.5
-
29
-
-
59349096851
-
Artificially induced sex-reversal in genotypic males of the medaka (Oryzias latipes)
-
Yamamoto, T. 1953. Artificially induced sex-reversal in genotypic males of the medaka (Oryzias latipes). J. Exp. Zool. 123, 571-594.
-
(1953)
J. Exp. Zool.
, vol.123
, pp. 571-594
-
-
Yamamoto, T.1
|