-
1
-
-
84875716859
-
Neutron-encoded mass signatures for multiplexed proteome quantification
-
Hebert, A.S.; Merrill, A.E.; Bailey, D.J.; Still, A.J.; Westphall, M.S.; Strieter, E.R.; Pagliarini, D.J.; Coon, J.J.: Neutron-encoded mass signatures for multiplexed proteome quantification. Nat. Methods 10, 332-334 (2013)
-
(2013)
Nat. Methods
, vol.10
, pp. 332-334
-
-
Hebert, A.S.1
Merrill, A.E.2
Bailey, D.J.3
Still, A.J.4
Westphall, M.S.5
Strieter, E.R.6
Pagliarini, D.J.7
Coon, J.J.8
-
2
-
-
84857494184
-
The use of mass defect in modern mass spectrometry
-
1:CAS:528:DC%2BC38XivVeqtbo%3D 10.1002/jms.2953
-
Sleno, L.: The use of mass defect in modern mass spectrometry. J. Mass Spectrom. 47, 226-236 (2012)
-
(2012)
J. Mass Spectrom.
, vol.47
, pp. 226-236
-
-
Sleno, L.1
-
3
-
-
34447312516
-
3I
-
DOI 10.1093/glycob/cwm033
-
Alvarez-Manilla, G.; Warren, N.L.; Abney, T.; Atwood, J.; Azadi, P.; York, W.S.; Pierce, M.; Orlando, R.: Tools for glycomics: relative quantitation of glycans by isotopic permethylation using (CH3I)-C-13. Glycobiology 17, 677-687 (2007) (Pubitemid 47053788)
-
(2007)
Glycobiology
, vol.17
, Issue.7
, pp. 677-687
-
-
Alvarez-Manilla, G.1
Warren, N.L.2
Abney, T.3
Atwood III, J.4
Azadi, P.5
York, W.S.6
Pierce, M.7
Orlando, R.8
-
4
-
-
84874630267
-
1-based label-free quantification
-
1:CAS:528:DC%2BC3sXhsVensbo%3D 10.1021/ac303352n
-
1-based label-free quantification. Anal. Chem. 85, 2825-2832 (2013)
-
(2013)
Anal. Chem.
, vol.85
, pp. 2825-2832
-
-
Vincent, C.E.1
Potts, G.K.2
Ulbrich, A.3
Westphall, M.S.4
Atwood, J.A.5
Coon, J.J.6
Weatherly, D.B.7
-
5
-
-
84872276165
-
Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome
-
1:CAS:528:DC%2BC38XhslKqtL3L
-
Hebert, A.S.; Dittenhafer-Reed, K.E.; Yu, W.; Bailey, D.J.; Selen, E.S.; Boersma, M.D.; Carson, J.J.; Tonelli, M.; Balloon, A.J.; Higbee, A.J.; Westphall, M.S.; Pagliarini, D.J.; Prolla, T.A.; Assadi-Porter, F.; Roy, S.; Denu, J.M.; Coon, J.J.: Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome. Mol. Cell 49, 186-199 (2013)
-
(2013)
Mol. Cell
, vol.49
, pp. 186-199
-
-
Hebert, A.S.1
Dittenhafer-Reed, K.E.2
Yu, W.3
Bailey, D.J.4
Selen, E.S.5
Boersma, M.D.6
Carson, J.J.7
Tonelli, M.8
Balloon, A.J.9
Higbee, A.J.10
Westphall, M.S.11
Pagliarini, D.J.12
Prolla, T.A.13
Assadi-Porter, F.14
Roy, S.15
Denu, J.M.16
Coon, J.J.17
-
6
-
-
34249717328
-
Quantitative carbamylation as a stable isotopic labeling method for comparative proteomics
-
DOI 10.1002/rcm.2990
-
Angel, P.M.; Orlando, R.: Quantitative carbamylation as a stable isotopic labeling method for comparative proteomics. Rapid Commun. Mass Spectrom. 21, 1623-1634 (2007) (Pubitemid 46827111)
-
(2007)
Rapid Communications in Mass Spectrometry
, vol.21
, Issue.10
, pp. 1623-1634
-
-
Angel, P.M.1
Orlando, R.2
-
7
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
DOI 10.1038/nmeth1019, PII NMETH1019
-
Elias, J.E.; Gygi, S.P.: Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 4, 207-214 (2007) (Pubitemid 46358868)
-
(2007)
Nature Methods
, vol.4
, Issue.3
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
8
-
-
7044246160
-
Open mass spectrometry search algorithm
-
DOI 10.1021/pr0499491
-
Geer, L.Y.; Markey, S.P.; Kowalak, J.A.; Wagner, L.; Xu, M.; Maynard, D.M.; Yang, X.; Shi, W.; Bryant, S.H.: Open mass spectrometry search algorithm. J. Proteome Res. 3, 958-964 (2004) (Pubitemid 39425651)
-
(2004)
Journal of Proteome Research
, vol.3
, Issue.5
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
Maynard, D.M.6
Yang, X.7
Shi, W.8
Bryant, S.H.9
-
9
-
-
79952306399
-
COMPASS: A suite of pre- and post-search proteomics software tools for OMSSA
-
1:CAS:528:DC%2BC3MXislOltb0%3D 10.1002/pmic.201000616
-
Wenger, C.D.; Phanstiel, D.H.; Lee, M.V.; Bailey, D.J.; Coon, J.J.: COMPASS: a suite of pre- and post-search proteomics software tools for OMSSA. Proteomics 11, 1064-1074 (2011)
-
(2011)
Proteomics
, vol.11
, pp. 1064-1074
-
-
Wenger, C.D.1
Phanstiel, D.H.2
Lee, M.V.3
Bailey, D.J.4
Coon, J.J.5
-
10
-
-
84865484653
-
Orbitrap mass spectrometry with resolving powers above 1,000,000
-
10.1016/j.ijms.2012.06.009
-
Denisov, E.; Damoc, E.; Lange, O.; Makarov, A.: Orbitrap mass spectrometry with resolving powers above 1,000,000. Int. J. Mass Spectrom. 325, 80-85 (2012)
-
(2012)
Int. J. Mass Spectrom.
, vol.325
, pp. 80-85
-
-
Denisov, E.1
Damoc, E.2
Lange, O.3
Makarov, A.4
-
11
-
-
77949786295
-
Value of using multiple proteases for large-scale mass spectrometry-based proteomics
-
1:CAS:528:DC%2BC3cXht12hs7o%3D 10.1021/pr900863u
-
Swaney, D.L.; Wenger, C.D.; Coon, J.J.: Value of using multiple proteases for large-scale mass spectrometry-based proteomics. J. Proteome Res. 9, 1323-1329 (2010)
-
(2010)
J. Proteome Res.
, vol.9
, pp. 1323-1329
-
-
Swaney, D.L.1
Wenger, C.D.2
Coon, J.J.3
-
12
-
-
34748916981
-
Quantitative mass spectrometry in proteomics: A critical review
-
DOI 10.1007/s00216-007-1486-6, Proteomics/Molecular Imaging
-
Bantscheff, M.; Schirle, M.; Sweetman, G.; Rick, J.; Kuster, B.: Quantitative mass spectrometry in proteomics: a critical review. Anal. Bioanal. Chem. 389, 1017-1031 (2007) (Pubitemid 47482251)
-
(2007)
Analytical and Bioanalytical Chemistry
, vol.389
, Issue.4
, pp. 1017-1031
-
-
Bantscheff, M.1
Schirle, M.2
Sweetman, G.3
Rick, J.4
Kuster, B.5
-
13
-
-
80053126424
-
Induction of peroxisomal lipid metabolism in mice fed a high-fat diet
-
1:CAS:528:DC%2BC3MXht1OgtbnP
-
Kozawa, S.; Honda, A.; Kajiwara, N.; Takemoto, Y.; Nagase, T.; Nikami, H.; Okano, Y.; Nakashima, S.; Shimozawa, N.: Induction of peroxisomal lipid metabolism in mice fed a high-fat diet. Mol. Med. Rep. 4, 1157-1162 (2011)
-
(2011)
Mol. Med. Rep.
, vol.4
, pp. 1157-1162
-
-
Kozawa, S.1
Honda, A.2
Kajiwara, N.3
Takemoto, Y.4
Nagase, T.5
Nikami, H.6
Okano, Y.7
Nakashima, S.8
Shimozawa, N.9
-
14
-
-
21344444333
-
A high-fat diet coordinately downregulates genes required for mitochondrial oxidative phosphorylation in skeletal muscle
-
DOI 10.2337/diabetes.54.7.1926
-
Sparks, L.M.; Xie, H.; Koza, R.A.; Mynatt, R.; Hulver, M.W.; Bray, G.A.; Smith, S.R.: A high-fat diet coordinately downregulates genes required for mitochondrial oxidative phosphorylation in skeletal muscle. Diabetes 54, 1926-1933 (2005) (Pubitemid 40911253)
-
(2005)
Diabetes
, vol.54
, Issue.7
, pp. 1926-1933
-
-
Sparks, L.M.1
Xie, H.2
Koza, R.A.3
Mynatt, R.4
Hulver, M.W.5
Bray, G.A.6
Smith, S.R.7
-
15
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
1:CAS:528:DC%2BD1cXhsFCkurnI 10.1038/nprot.2008.211
-
Huang, D.W.; Sherman, B.T.; Lempicki, R.A.: Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57 (2009)
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
|