Whole genome analysis of epizootic hemorrhagic disease virus identified limited genome constellations and preferential reassortment

Journal of General Virology

Volumn 95, Issue PART 2, 2014, Pages 434-441

  Anbalagan, Srivishnupriya ^a   Cooper, Elyse ^a   Klumper, Pat ^a   Simonson, Randy R ^a   Hause, Ben M ^a  

^a Newport Laboratories   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NONSTRUCTURAL PROTEIN 1; NONSTRUCTURAL PROTEIN 2; NONSTRUCTURAL PROTEIN 3; PROTEIN VP1; PROTEIN VP2; PROTEIN VP3; PROTEIN VP4; PROTEIN VP5; PROTEIN VP6; PROTEIN VP7; UNCLASSIFIED DRUG; VIRUS PROTEIN;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; EPIZOOTIC HEMORRHAGIC DISEASE VIRUS; GENE SEQUENCE; GENETIC COMPLEMENTATION; GENETIC REASSORTMENT; GENETIC SIMILARITY; GENETIC VARIABILITY; MICROBIAL POPULATION DYNAMICS; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; ORBIVIRUS; PRIORITY JOURNAL; SEROTYPE; VIRUS GENOME; VIRUS ISOLATION; VIRUS STRAIN;

CLUSTER ANALYSIS; GENETIC VARIATION; GENOME, VIRAL; GENOTYPE; HEMORRHAGIC DISEASE VIRUS, EPIZOOTIC; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; REASSORTANT VIRUSES; RECOMBINATION, GENETIC; REOVIRIDAE INFECTIONS; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

EID: 84892591770     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.059659-0     Document Type: Article

References (25)

1. Allison, A. B., Goekjian, V. H., Potgieter, A. C., Wilson, W. C., Johnson, D. J., Mertens, P. P. & Stallknecht, D. E. (2010). Detection of a novel reassortant epizootic hemorrhagic disease virus (EHDV) in the USA containing RNA segments derived from both exotic (EHDV-6) and endemic (EHDV-2) serotypes. J Gen Virol 91, 430-439.
2. Anthony, S. J., Maan, N., Maan, S., Sutton, G., Attoui, H. & Mertens, P. P. (2009a). Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV). Virus Res 145, 187-199.
3. Anthony, S. J., Maan, N., Maan, S., Sutton, G., Attoui, H. & Mertens, P. P. (2009b). Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV). Virus Res 145, 211-219.
4. Anthony, S. J., Maan, S., Maan, N., Kgosana, L., Bachanek-Bankowska, K., Batten, C., Darpel, K. E., Sutton, G., Attoui, H. & Mertens, P. P. (2009c). Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup. Virus Res 145, 200-210.
5. Campbell, C. H. & St George, T. D. (1986). A preliminary report of a comparison of epizootic haemorrhagic disease viruses from Australia with others from North America, Japan and Nigeria. Aust Vet J 63, 233.
6. Cheney, I. W., Yamakawa, M., Roy, P., Mecham, J. O. & Wilson, W. C. (1996). Molecular characterization of the segment 2 gene of epizootic hemorrhagic disease virus serotype 2: gene sequence and genetic diversity. Virology 224, 555-560.
7. Clavijo, A., Sun, F., Lester, T., Jasperson, D. C. & Wilson, W. C. (2010). An improved real-time polymerase chain reaction for the simultaneous detection of all serotypes of epizootic hemorrhagic disease virus. J Vet Diagn Invest 22, 588-593.
8. Couvillion, C. E., Jenney, E. W., Pearson, J. E. & Coker, M. E. (1980). Survey for antibodies to viruses of bovine virus diarrhea, bluetongue, and epizootic hemorrhagic disease in hunter-killed mule deer in New Mexico. J Am Vet Med Assoc 177, 790-791.
9. Holland, J., Spindler, K., Horodyski, F., Grabau, E., Nichol, S. & VandePol, S. (1982). Rapid evolution of RNA genomes. Science 215, 1577-1585.
10. Jenkins, G. M., Rambaut, A., Pybus, O. G. & Holmes, E. C. (2002). Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. J Mol Evol 54, 156-165.
11. Jessup, D. A. (1985). Epidemiology of two orbiviruses in California's native wild ruminants: preliminary report. Prog Clin Biol Res 178, 53-65.
12. Lee, V. H., Causey, O. R. & Moore, D. L. (1974). Bluetongue and related viruses in Ibadan, Nigeria: isolation and preliminary identification of viruses. Am J Vet Res 35, 1105-1108.
13. Mecham, J. O. & Dean, V. C. (1988). Protein coding assignment for the genome of epizootic haemorrhagic disease virus. J Gen Virol 69, 1255-1262.
14. Mohammed, M. E., Aradaib, I. E., Mukhtar, M. M., Ghalib, H. W., Riemann, H. P., Oyejide, A. & Osburn, B. I. (1996). Application of molecular biological techniques for detection of epizootic hemorrhagic disease virus (EHDV-318) recovered from a sentinel calf in central Sudan. Vet Microbiol 52, 201-208.
15. Moore, D. L. (1974). Bluetongue and related viruses in Ibadan, Nigeria: serologic comparison of bluetongue, epizootic hemorrhagic disease of deer, and Abadina (Palyam) viral isolates. Am J Vet Res 35, 1109-1113.
16. Moore, D. L. & Kemp, G. E. (1974). Bluetongue and related viruses in Ibadan, Nigeria: serologic studies of domesticated and wild animals. Am J Vet Res 35, 1115-1120.
17. Murphy, M. D., Howerth, E. W., MacLachlan, N. J. & Stallknecht, D. E. (2005). Genetic variation among epizootic hemorrhagic disease viruses in the southeastern United States: 1978-2001. Infect Genet Evol 5, 157-165.
18. Mutebi, J.-P., Wang, H., Li, L., Bryant, J. E. & Barrett, A. D. T. (2001). Phylogenetic and evolutionary relationships among yellow fever virus isolates in Africa. J Virol 75, 6999-7008.
19. Potgieter, A. C., Page, N. A., Liebenberg, J., Wright, I. M., Landt, O. & van Dijk, A. A. (2009). Improved strategies for sequence-independent amplification and sequencing of viral double-stranded RNA genomes. J Gen Virol 90, 1423-1432.
20. Savini, G., Afonso, A., Mellor, P., Aradaib, I., Yadin, H., Sanaa, M., Wilson, W., Monaco, F. & Domingo, M. (2011). Epizootic haemorragic disease. Res Vet Sci 91, 1-17.
21. Shaw, A. E., Ratinier, M., Nunes, S. F., Nomikou, K., Caporale, M., Golder, M., Allan, K., Hamers, C., Hudelet, P. & other authors (2013). Reassortment between two serologically unrelated bluetongue virus strains is flexible and can involve any genome segment. J Virol 87, 543-557.
22. St George, T. D., Cybinski, D. H., Standfast, H. A., Gard, G. P. & Della-Porta, A. J. (1983). The isolation of five different viruses of the epizootic haemorrhagic disease of deer serogroup. Aust Vet J 60, 216-217.
23. Stallknecht, D. E., Nettles, V. F., Fletcher, W. O. & Erickson, G. A. (1985). Enzootic vesicular stomatitis New Jersey type in an insular feral swine population. Am J Epidemiol 122, 876-883.
24. Stallknecht, D. E., Nettles, V. F., Rollor, E. A., III & Howerth, E. W. (1995). Epizootic hemorrhagic disease virus and bluetongue virus serotype distribution in white-tailed deer in Georgia. J Wildl Dis 31, 331-338.
25. Yadin, H., Brenner, J., Bumbrov, V., Oved, Z., Stram, Y., Klement, E., Perl, S., Anthony, S., Maan, S. & other authors (2008). Epizootic haemorrhagic disease virus type 7 infection in cattle in Israel. Vet Rec 162, 53-56.