메뉴 건너뛰기




Volumn 32, Issue 1, 2014, Pages 153-161

A Novel Co-immunoprecipitation Protocol Based on Protoplast Transient Gene Expression for Studying Protein-protein Interactions in Rice

Author keywords

Co immunoprecipitation; Commercial antibody; Rice (Oryza sativa L.); Transient expression

Indexed keywords

ORYZA SATIVA;

EID: 84892485021     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-013-0633-9     Document Type: Article
Times cited : (52)

References (35)
  • 1
    • 33847213280 scopus 로고    scopus 로고
    • A novel system for gene silencing using siRNAs in rice leaf and stem-derived protoplasts
    • Bart R, Chern M, Park CJ, Bartley L, Ronald PC (2006) A novel system for gene silencing using siRNAs in rice leaf and stem-derived protoplasts. Plant Methods 2: 13-21.
    • (2006) Plant Methods , vol.2 , pp. 13-21
    • Bart, R.1    Chern, M.2    Park, C.J.3    Bartley, L.4    Ronald, P.C.5
  • 2
    • 34548418142 scopus 로고    scopus 로고
    • Methods for the detection and analysis of protein-protein interactions
    • Berggard T, Linse S, James P (2007) Methods for the detection and analysis of protein-protein interactions. Proteomics 7: 2833-2842.
    • (2007) Proteomics , vol.7 , pp. 2833-2842
    • Berggard, T.1    Linse, S.2    James, P.3
  • 3
    • 34248547642 scopus 로고    scopus 로고
    • Coimmunoprecipitation on Drosophila cells in culture
    • Ceriani MF (2007) Coimmunoprecipitation on Drosophila cells in culture. Methods Mol Biol 362: 423-427.
    • (2007) Methods Mol Biol , vol.362 , pp. 423-427
    • Ceriani, M.F.1
  • 4
    • 33748347060 scopus 로고    scopus 로고
    • A highly efficient transient protoplast system for analyzing defence gene expression and protein-protein interactions in rice
    • Chen S, Tao L, Zeng L, Vega-Sanchez ME, Umemura K, Wang GL (2006) A highly efficient transient protoplast system for analyzing defence gene expression and protein-protein interactions in rice. Mol Plant Pathol 7: 417-427.
    • (2006) Mol Plant Pathol , vol.7 , pp. 417-427
    • Chen, S.1    Tao, L.2    Zeng, L.3    Vega-Sanchez, M.E.4    Umemura, K.5    Wang, G.L.6
  • 5
    • 49749107169 scopus 로고    scopus 로고
    • Fluorescence-based methods in the study of protein-protein interactions in living cells
    • Ciruela F (2008) Fluorescence-based methods in the study of protein-protein interactions in living cells. Curr Opin Biotech 19: 338-343.
    • (2008) Curr Opin Biotech , vol.19 , pp. 338-343
    • Ciruela, F.1
  • 6
    • 48049117121 scopus 로고    scopus 로고
    • Localizing protein-protein interactions by bimolecular fluorescence complementation in planta
    • Citovsky V, Gafni Y, Tzfira T (2008) Localizing protein-protein interactions by bimolecular fluorescence complementation in planta. Methods 45: 196-206.
    • (2008) Methods , vol.45 , pp. 196-206
    • Citovsky, V.1    Gafni, Y.2    Tzfira, T.3
  • 8
    • 20644432459 scopus 로고    scopus 로고
    • Plant protoplasts: status and biotechnological perspectives
    • Davey MR, Anthony P, Power JB, Lowe KC (2005) Plant protoplasts: status and biotechnological perspectives. Biotechnol Adv 23: 131-171.
    • (2005) Biotechnol Adv , vol.23 , pp. 131-171
    • Davey, M.R.1    Anthony, P.2    Power, J.B.3    Lowe, K.C.4
  • 11
    • 34447126368 scopus 로고    scopus 로고
    • Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice
    • Huang L, Sun Q, Qin F, Li C, Zhao Y, Zhou DX (2007) Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice. Plant Physiol 144: 1508-1519.
    • (2007) Plant Physiol , vol.144 , pp. 1508-1519
    • Huang, L.1    Sun, Q.2    Qin, F.3    Li, C.4    Zhao, Y.5    Zhou, D.X.6
  • 12
    • 67650621376 scopus 로고    scopus 로고
    • Characterization of Glossy1-homologous genes in rice involved in leaf wax accumulation and drought resistance
    • Islam MA, Du H, Ning J, Ye H, Xiong L (2009) Characterization of Glossy1-homologous genes in rice involved in leaf wax accumulation and drought resistance. Plant Mol Biol 70: 443-456.
    • (2009) Plant Mol Biol , vol.70 , pp. 443-456
    • Islam, M.A.1    Du, H.2    Ning, J.3    Ye, H.4    Xiong, L.5
  • 13
    • 0036910332 scopus 로고    scopus 로고
    • Abscisic acid induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1
    • Kagaya Y (2002) Abscisic acid induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell 14: 3177-3189.
    • (2002) Plant Cell , vol.14 , pp. 3177-3189
    • Kagaya, Y.1
  • 14
    • 50649096663 scopus 로고    scopus 로고
    • Analyzing protein interaction networks using structural information
    • Kiel C, Beltrao P, Serrano L (2008) Analyzing protein interaction networks using structural information. Annu Rev Biochem 77: 415-441.
    • (2008) Annu Rev Biochem , vol.77 , pp. 415-441
    • Kiel, C.1    Beltrao, P.2    Serrano, L.3
  • 15
    • 84880765639 scopus 로고    scopus 로고
    • Single or multiple gene silencing directed by U6 promoter-based shRNA vectors facilitates efficient functional genome analysis in medicago truncatula
    • Kim GB, Bae JH, An CS, Nam YW (2013) Single or multiple gene silencing directed by U6 promoter-based shRNA vectors facilitates efficient functional genome analysis in medicago truncatula. Plant Mol Biol Rep 31: 963-977.
    • (2013) Plant Mol Biol Rep , vol.31 , pp. 963-977
    • Kim, G.B.1    Bae, J.H.2    An, C.S.3    Nam, Y.W.4
  • 16
    • 77956823972 scopus 로고    scopus 로고
    • Activation of an Arabidopsis resistance protein is specified by the in planta association of its leucine-rich repeat domain with the cognate oomycete effector
    • Krasileva KV, Dahlbeck D, Staskawicz BJ (2010) Activation of an Arabidopsis resistance protein is specified by the in planta association of its leucine-rich repeat domain with the cognate oomycete effector. Plant Cell 22: 2444-2458.
    • (2010) Plant Cell , vol.22 , pp. 2444-2458
    • Krasileva, K.V.1    Dahlbeck, D.2    Staskawicz, B.J.3
  • 17
    • 0001268535 scopus 로고
    • Purification and viability determinations of plant protoplasts
    • Larkin PJ (1976) Purification and viability determinations of plant protoplasts. Planta 128: 213-216.
    • (1976) Planta , vol.128 , pp. 213-216
    • Larkin, P.J.1
  • 18
    • 79952296948 scopus 로고    scopus 로고
    • Expression of RNA-interference/antisense transgenes by the cognate promoters of target genes is a better gene-silencing strategy to study gene functions in rice
    • Li J, Jiang D, Zhou H, Li F, Yang J, Hong L, Fu X, Li Z, Liu Z, Li J, Zhuang C (2011) Expression of RNA-interference/antisense transgenes by the cognate promoters of target genes is a better gene-silencing strategy to study gene functions in rice. PloS ONE 6: e17444.
    • (2011) PloS ONE , vol.6
    • Li, J.1    Jiang, D.2    Zhou, H.3    Li, F.4    Yang, J.5    Hong, L.6    Fu, X.7    Li, Z.8    Liu, Z.9    Li, J.10    Zhuang, C.11
  • 20
    • 33746315058 scopus 로고    scopus 로고
    • Silicon uptake and accumulation in higher plants
    • Ma JF, Yamaji N (2006) Silicon uptake and accumulation in higher plants. Trends Plant Sci 11: 392-397.
    • (2006) Trends Plant Sci , vol.11 , pp. 392-397
    • Ma, J.F.1    Yamaji, N.2
  • 22
    • 3242690877 scopus 로고    scopus 로고
    • Co-immunoprecipitation from transfected cells
    • Masters SC (2004) Co-immunoprecipitation from transfected cells. Methods Mol Biol 261: 337-350.
    • (2004) Methods Mol Biol , vol.261 , pp. 337-350
    • Masters, S.C.1
  • 23
    • 38449110969 scopus 로고    scopus 로고
    • Transient expression of fluorescent fusion proteins in protoplasts of suspension cultured cells
    • Miao YS, Jiang LW (2007) Transient expression of fluorescent fusion proteins in protoplasts of suspension cultured cells. Nat Protoc 2: 2348-2353.
    • (2007) Nat Protoc , vol.2 , pp. 2348-2353
    • Miao, Y.S.1    Jiang, L.W.2
  • 24
    • 38949178970 scopus 로고    scopus 로고
    • Biochemical approaches for discovering protein-protein interactions
    • Miernyk JA, Thelen JJ (2008) Biochemical approaches for discovering protein-protein interactions. Plant J 53: 597-609.
    • (2008) Plant J , vol.53 , pp. 597-609
    • Miernyk, J.A.1    Thelen, J.J.2
  • 25
    • 79958250847 scopus 로고    scopus 로고
    • Fragment complementation and co-immunoprecipitation assays for understanding R protein structure and function
    • Moffett P (2011) Fragment complementation and co-immunoprecipitation assays for understanding R protein structure and function. Methods Mol Biol 712: 9-20.
    • (2011) Methods Mol Biol , vol.712 , pp. 9-20
    • Moffett, P.1
  • 26
    • 37249039990 scopus 로고    scopus 로고
    • The analysis of protein-protein interactions in plants by bimolecular fluorescence complementation
    • Ohad N, Shichrur K, Yalovsky S (2007) The analysis of protein-protein interactions in plants by bimolecular fluorescence complementation. Plant Physiol 145: 1090-1099.
    • (2007) Plant Physiol , vol.145 , pp. 1090-1099
    • Ohad, N.1    Shichrur, K.2    Yalovsky, S.3
  • 27
    • 39049153858 scopus 로고    scopus 로고
    • Proteomics approach to identify dehydration responsive nuclear proteins from chickpea (Cicer arietinum L.)
    • Pandey A, Chakraborty S, Datta A, Chakraborty N (2008) Proteomics approach to identify dehydration responsive nuclear proteins from chickpea (Cicer arietinum L.). Mol Cell Proteomics 7: 88-107.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 88-107
    • Pandey, A.1    Chakraborty, S.2    Datta, A.3    Chakraborty, N.4
  • 28
    • 63549149056 scopus 로고    scopus 로고
    • SAS Institute, SAS Institute, Cary
    • SAS Institute (2008) SAS/STAT 9. 2 user's guide. SAS Institute, Cary.
    • (2008) SAS/STAT 9. 2 user's guide
  • 29
    • 85047682075 scopus 로고    scopus 로고
    • Signal Transduction in Maize and Arabidopsis Mesophyll Protoplasts
    • Sheen J (2001) Signal Transduction in Maize and Arabidopsis Mesophyll Protoplasts. Plant Physiol 127: 1466-1475.
    • (2001) Plant Physiol , vol.127 , pp. 1466-1475
    • Sheen, J.1
  • 30
    • 0037001967 scopus 로고    scopus 로고
    • Rubisco: structure, regulatory interactions, and possibilities for a better enzyme
    • Spreitzer RJ, Salvucci ME (2002) Rubisco: structure, regulatory interactions, and possibilities for a better enzyme. Annu Rev Plant Biol 53: 449-475.
    • (2002) Annu Rev Plant Biol , vol.53 , pp. 449-475
    • Spreitzer, R.J.1    Salvucci, M.E.2
  • 31
    • 70449769325 scopus 로고    scopus 로고
    • Protein-protein interaction networks: how can a hub protein bind so many different partners?
    • Tsai CJ, Ma B, Nussinov R (2009) Protein-protein interaction networks: how can a hub protein bind so many different partners? Trends Biochem Sci 34: 594-600.
    • (2009) Trends Biochem Sci , vol.34 , pp. 594-600
    • Tsai, C.J.1    Ma, B.2    Nussinov, R.3
  • 32
    • 33747868360 scopus 로고    scopus 로고
    • Protein interaction networks in plants
    • Uhrig JF (2006) Protein interaction networks in plants. Planta 224: 771-781.
    • (2006) Planta , vol.224 , pp. 771-781
    • Uhrig, J.F.1
  • 33
    • 70349331032 scopus 로고    scopus 로고
    • Identifying responsive functional modules from protein-protein interaction network
    • Wu Z, Zhao X, Chen L (2009) Identifying responsive functional modules from protein-protein interaction network. Mol Cell 27: 271-277.
    • (2009) Mol Cell , vol.27 , pp. 271-277
    • Wu, Z.1    Zhao, X.2    Chen, L.3
  • 34
    • 34447099171 scopus 로고    scopus 로고
    • Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis
    • Yoo SD, Cho YH, Sheen J (2007) Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis. Nat Protoc 2: 1565-1572.
    • (2007) Nat Protoc , vol.2 , pp. 1565-1572
    • Yoo, S.D.1    Cho, Y.H.2    Sheen, J.3
  • 35
    • 84947206485 scopus 로고    scopus 로고
    • A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes
    • Zhang Y, Su J, Duan S, Ao Y, Dai J, Liu J, Wang P, Li Y, Liu B, Feng D, Wang J, Wang H (2011) A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes. Plant Methods 7: 30-43.
    • (2011) Plant Methods , vol.7 , pp. 30-43
    • Zhang, Y.1    Su, J.2    Duan, S.3    Ao, Y.4    Dai, J.5    Liu, J.6    Wang, P.7    Li, Y.8    Liu, B.9    Feng, D.10    Wang, J.11    Wang, H.12


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.