메뉴 건너뛰기




Volumn 8, Issue 11, 2013, Pages

Donkey orchid symptomless virus: A viral 'Platypus' from Australian terrestrial orchids

Author keywords

[No Author keywords available]

Indexed keywords

AUTOPHAGY PROTEIN; COAT PROTEIN; MOVEMENT PROTEIN; MYOSIN; REPLICASE; UNCLASSIFIED DRUG; VIRUS GLYCOPROTEIN; VIRUS PROTEIN;

EID: 84892395139     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0079587     Document Type: Article
Times cited : (19)

References (42)
  • 1
    • 63749108887 scopus 로고    scopus 로고
    • Non-cultivated plants of the Tallgrass Prairie Preserve of northeastern Oklahoma frequently contain virus-like sequences in particulate fractions
    • PubMed: 19152821
    • Muthukumar V, Melcher U, Pierce M, Wiley GB, Roe BA et al. (2009) Non-cultivated plants of the Tallgrass Prairie Preserve of northeastern Oklahoma frequently contain virus-like sequences in particulate fractions. Virus Res 141: 169-173. PubMed: 19152821.
    • (2009) Virus Res , vol.141 , pp. 169-173
    • Muthukumar, V.1    Melcher, U.2    Pierce, M.3    Wiley, G.B.4    Roe, B.A.5
  • 2
    • 77954325765 scopus 로고    scopus 로고
    • Lifestyles of plant viruses
    • PubMed: 20478885
    • Roossinck MJ (2010) Lifestyles of plant viruses. Philos Trans R Soc Lond B: Biol Sci 365: 1899-1905. PubMed: 20478885.
    • (2010) Philos Trans R Soc Lond B: Biol Sci , vol.365 , pp. 1899-1905
    • Roossinck, M.J.1
  • 3
    • 77951921585 scopus 로고    scopus 로고
    • Ecogenomics: Using massively parallel pyrosequencing to understand virus ecology
    • PubMed: 20331772
    • Roossinck MJ, Saha P, Wiley GB, Quan J, White JD et al. (2010) Ecogenomics: using massively parallel pyrosequencing to understand virus ecology. Mol Ecol 19: 81-88. PubMed: 20331772.
    • (2010) Mol Ecol , vol.19 , pp. 81-88
    • Roossinck, M.J.1    Saha, P.2    Wiley, G.B.3    Quan, J.4    White, J.D.5
  • 4
    • 84856405487 scopus 로고    scopus 로고
    • Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples
    • PubMed: 22075920
    • Wylie SJ, Luo H, Li H, Jones MGK (2012a) Multiple polyadenylated RNA viruses detected in pooled cultivated and wild plant samples. Arch Virol 157: 271-284. PubMed: 22075920.
    • (2012) Arch Virol , vol.157 , pp. 271-284
    • Wylie, S.J.1    Luo, H.2    Li, H.3    Jones, M.G.K.4
  • 5
    • 84870302597 scopus 로고    scopus 로고
    • Caladenia virus A, an unusual new member of the Potyviridae from terrestrial orchids in Western Australia
    • Wylie SJ, Tan A, Li H, Dixon KW, Jones MGK (2012b) Caladenia virus A, an unusual new member of the Potyviridae from terrestrial orchids in Western Australia. Arch Virol 157: 2447-2452.
    • (2012) Arch Virol , vol.157 , pp. 2447-2452
    • Wylie, S.J.1    Tan, A.2    Li, H.3    Dixon, K.W.4    Jones, M.G.K.5
  • 6
    • 84872824851 scopus 로고    scopus 로고
    • Exotic and indigenous viruses infect wild populations and captive collections of temperate terrestrial orchids (Diuris species) in Australia
    • PubMed: 23089850
    • Wylie SJ, Li H, Dixon KW, Richards H, Jones MGK (2013) Exotic and indigenous viruses infect wild populations and captive collections of temperate terrestrial orchids (Diuris species) in Australia. Virus Res 171: 22-32. PubMed: 23089850.
    • (2013) Virus Res , vol.171 , pp. 22-32
    • Wylie, S.J.1    Li, H.2    Dixon, K.W.3    Richards, H.4    Jones, M.G.K.5
  • 7
    • 8144225550 scopus 로고    scopus 로고
    • The southwest Australian floristic region: Evolution and conservation of a global hot spot of biodiversity
    • Hopper SD, Gioia P (2004) The southwest Australian floristic region: evolution and conservation of a global hot spot of biodiversity. Annu Rev Ecol Evol Syst 35: 623-650.
    • (2004) Annu Rev Ecol Evol Syst , vol.35 , pp. 623-650
    • Hopper, S.D.1    Gioia, P.2
  • 9
    • 68849122447 scopus 로고    scopus 로고
    • Terrestrial orchid conservation in the age of extinction
    • PubMed: 19218582
    • Swarts ND, Dixon KW (2009) Terrestrial orchid conservation in the age of extinction. Ann Bot 104: 543-556. PubMed: 19218582.
    • (2009) Ann Bot , vol.104 , pp. 543-556
    • Swarts, N.D.1    Dixon, K.W.2
  • 10
    • 33745194882 scopus 로고    scopus 로고
    • Orchid conservation: A global perspective
    • KW DixonSP KellRL BarrettPJ Cribb Sabah: Natural History Publications
    • Cribb PJ, Kell SP, Dixon KW, Barrett RL (2003) Orchid conservation: a global perspective. In: KW DixonSP KellRL BarrettPJ Cribb. Orchid conservation. Sabah: Natural History Publications. pp. 1-24.
    • (2003) Orchid Conservation , pp. 1-24
    • Cribb, P.J.1    Kell, S.P.2    Dixon, K.W.3    Barrett, R.L.4
  • 11
    • 33846908461 scopus 로고    scopus 로고
    • Diversity of mycorrhizal fungi of terrestrial orchids: Compatibility webs, brief encounters, lasting relationships and alien invasions
    • PubMed: 17289365
    • Bonnardeaux Y, Brundrett M, Batty A, Dixon K, Koch J et al. (2007) Diversity of mycorrhizal fungi of terrestrial orchids: compatibility webs, brief encounters, lasting relationships and alien invasions. Mycol Res 111: 51-61. PubMed: 17289365.
    • (2007) Mycol Res , vol.111 , pp. 51-61
    • Bonnardeaux, Y.1    Brundrett, M.2    Batty, A.3    Dixon, K.4    Koch, J.5
  • 12
    • 79551559492 scopus 로고    scopus 로고
    • Orchid biogeography and factors associated with rarity in a biodiversity hotspot, the Southwest Australian Floristic Region
    • Phillips RD, Brown AP, Dixon KW, Hopper SD (2011) Orchid biogeography and factors associated with rarity in a biodiversity hotspot, the Southwest Australian Floristic Region. J Biogeogr 38: 487-501.
    • (2011) J Biogeogr , vol.38 , pp. 487-501
    • Phillips, R.D.1    Brown, A.P.2    Dixon, K.W.3    Hopper, S.D.4
  • 13
    • 34548600093 scopus 로고    scopus 로고
    • Virus impact at the interface of an ancient ecosystem and a recent agroecosystem: Studies on three legume-infecting potyviruses in the southwest Australian floristic region
    • Webster C, Jones RAC, Coutts BA, Jones MGK, Wylie SJ (2007) Virus impact at the interface of an ancient ecosystem and a recent agroecosystem: studies on three legume-infecting potyviruses in the southwest Australian floristic region. Plant Pathol 56: 729-742.
    • (2007) Plant Pathol , vol.56 , pp. 729-742
    • Webster, C.1    Jones, R.A.C.2    Coutts, B.A.3    Jones, M.G.K.4    Wylie, S.J.5
  • 14
    • 80053181052 scopus 로고    scopus 로고
    • Indigenous and introduced potyviruses of legumes and Passiflora spp. From Australia: Biological properties and comparison of coat protein nucleotide sequences
    • PubMed: 21744001
    • Coutts BA, Kehoe MA, Webster CG, Wylie SJ, Jones RAC (2011) Indigenous and introduced potyviruses of legumes and Passiflora spp. from Australia: biological properties and comparison of coat protein nucleotide sequences. Arch Virol 156: 1757-1774. PubMed: 21744001.
    • (2011) Arch Virol , vol.156 , pp. 1757-1774
    • Coutts, B.A.1    Kehoe, M.A.2    Webster, C.G.3    Wylie, S.J.4    Jones, R.A.C.5
  • 15
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 16
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • PubMed: 21546353
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M et al. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739. PubMed: 21546353.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 17
    • 2442626706 scopus 로고    scopus 로고
    • Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
    • PubMed: 15123812
    • Mathews DH, Disney MD, Childs JL, Schroeder SJ, Zuker M et al. (2004) Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. Proc Natl Acad Sci U-S-A 101: 7287-7292. PubMed: 15123812.
    • (2004) Proc Natl Acad Sci U-S-A , vol.101 , pp. 7287-7292
    • Mathews, D.H.1    Disney, M.D.2    Childs, J.L.3    Schroeder, S.J.4    Zuker, M.5
  • 18
    • 0034800374 scopus 로고    scopus 로고
    • InterProScan - An integration platform for the signature-recognition methods in InterPro
    • Zdobnov EM, Apweiler R (2001) InterProScan - an integration platform for the signature-recognition methods in InterPro. Bioinform 17: 847-848.
    • (2001) Bioinform , vol.17 , pp. 847-848
    • Zdobnov, E.M.1    Apweiler, R.2
  • 19
    • 0026793857 scopus 로고
    • Conservation of the putative methyl-transferase domain: A hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses
    • PubMed: 1645151
    • Rozanov MN, Koonin EV, Gorbalenya AE (1992) Conservation of the putative methyl-transferase domain: a hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses. J Gen Virol 73: 2129-2134. PubMed: 1645151.
    • (1992) J Gen Virol , vol.73 , pp. 2129-2134
    • Rozanov, M.N.1    Koonin, E.V.2    Gorbalenya, A.E.3
  • 20
    • 0027504136 scopus 로고
    • Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences
    • PubMed: 8269709
    • Koonin EV, Dolja VV (1993) Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol Biol 28: 375-430. PubMed: 8269709.
    • (1993) Crit Rev Biochem Mol Biol , vol.28 , pp. 375-430
    • Koonin, E.V.1    Dolja, V.V.2
  • 21
    • 0025743809 scopus 로고
    • The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses
    • PubMed: 1895057
    • Koonin EV (1991) The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. J Gen Virol 72: 2197-2206. PubMed: 1895057.
    • (1991) J Gen Virol , vol.72 , pp. 2197-2206
    • Koonin, E.V.1
  • 23
    • 26044454332 scopus 로고    scopus 로고
    • Invasive annual grasses indirectly increase virus incidence in California native perennial bunchgrasses
    • PubMed: 15875144
    • Malmstrom CM, McCullough AJ, Johnson HA, Newton LA, Borer ET (2005) Invasive annual grasses indirectly increase virus incidence in California native perennial bunchgrasses. Oecologia 145: 153-164. PubMed: 15875144.
    • (2005) Oecologia , vol.145 , pp. 153-164
    • Malmstrom, C.M.1    McCullough, A.J.2    Johnson, H.A.3    Newton, L.A.4    Borer, E.T.5
  • 24
    • 80051594180 scopus 로고    scopus 로고
    • The expanding field of plant virus ecology: Historical foundations, knowledge gaps, and research directions
    • PubMed: 21620909
    • Malmstrom CM, Melcher U, Bosque-Pérez NA (2011) The expanding field of plant virus ecology: Historical foundations, knowledge gaps, and research directions. Virus Res 159: 84-94. PubMed: 21620909.
    • (2011) Virus Res , vol.159 , pp. 84-94
    • Malmstrom, C.M.1    Melcher, U.2    Bosque-Pérez, N.A.3
  • 25
    • 79955002331 scopus 로고    scopus 로고
    • The significance of the sub-Antarctic Kerguelen Islands for the assessment of the vulnerability of native communities to climate change, alien insect invasions and plant viruses
    • Lebouvier M, Laparie M, Hulle M, Marais A, Cozic Y et al. (2011) The significance of the sub-Antarctic Kerguelen Islands for the assessment of the vulnerability of native communities to climate change, alien insect invasions and plant viruses. Biol Inv 13: 1195-1208.
    • (2011) Biol Inv , vol.13 , pp. 1195-1208
    • Lebouvier, M.1    Laparie, M.2    Hulle, M.3    Marais, A.4    Cozic, Y.5
  • 26
    • 84892423582 scopus 로고    scopus 로고
    • Viruses of plants in the Great Smoky Mountains National Park
    • Sabanadzovic S, Ghanem-Sabanadzovic Abou N (2010) Viruses of plants in the Great Smoky Mountains National Park. Phytopathol 100: S112-S112.
    • (2010) Phytopathol , vol.100
    • Sabanadzovic, S.1    Ghanem-Sabanadzovic Abou, N.2
  • 27
    • 33846597007 scopus 로고    scopus 로고
    • A virus in a fungus in a plant: Three-way symbiosis required for thermal tolerance
    • PubMed: 17255511
    • Márquez LM, Redman RS, Rodriguez RJ, Roossinck MJ (2007) A virus in a fungus in a plant: three-way symbiosis required for thermal tolerance. Science 315: 513-515. PubMed: 17255511.
    • (2007) Science , vol.315 , pp. 513-515
    • Márquez, L.M.1    Redman, R.S.2    Rodriguez, R.J.3    Roossinck, M.J.4
  • 28
    • 55649092718 scopus 로고    scopus 로고
    • Virus infection improves drought tolerance
    • PubMed: 18823313
    • Xu P, Chen F, Mannas JP, Feldman T, Sumner LW (2008) Virus infection improves drought tolerance. New Phytol 180: 911-921. PubMed: 18823313.
    • (2008) New Phytol , vol.180 , pp. 911-921
    • Xu, P.1    Chen, F.2    Mannas, J.P.3    Feldman, T.4    Sumner, L.W.5
  • 29
    • 78149333135 scopus 로고    scopus 로고
    • Plant community diversity influences vector behaviour and Barley yellow dwarf virus population structure
    • Hall GS, Peters JS, Little DP, Power AG (2010) Plant community diversity influences vector behaviour and Barley yellow dwarf virus population structure. Plant Pathol 59: 1152-1158.
    • (2010) Plant Pathol , vol.59 , pp. 1152-1158
    • Hall, G.S.1    Peters, J.S.2    Little, D.P.3    Power, A.G.4
  • 30
    • 80051589179 scopus 로고    scopus 로고
    • The community ecology of barley/cereal yellow dwarf viruses in Western US grasslands
    • PubMed: 21641945
    • Power AG, Borer ET, Hosseini P, Mitchell CE, Seabloom EW (2011) The community ecology of barley/cereal yellow dwarf viruses in Western US grasslands. Virus Res 159: 95-100. PubMed: 21641945.
    • (2011) Virus Res , vol.159 , pp. 95-100
    • Power, A.G.1    Borer, E.T.2    Hosseini, P.3    Mitchell, C.E.4    Seabloom, E.W.5
  • 31
    • 84866074601 scopus 로고    scopus 로고
    • Plant viruses alter insect behavior to enhance their spread
    • Article 578, doi:10.1038/srep00578. PubMed: 22896811
    • Ingwell LL, Eigenbrode SD, Bosque-Pérez NA (2012) Plant viruses alter insect behavior to enhance their spread. Scientific Rep 2: 578-, Article 578, doi:10.1038/srep00578. PubMed: 22896811.
    • (2012) Scientific Rep , vol.2 , pp. 578
    • Ingwell, L.L.1    Eigenbrode, S.D.2    Bosque-Pérez, N.A.3
  • 33
    • 2442511938 scopus 로고    scopus 로고
    • The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation
    • PubMed: 15098118
    • Adams MJ, Antoniw JF, Bar-Joseph M, Brunt AA, Candresse T et al. (2004) The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Arch Virol 149: 1045-1060. PubMed: 15098118.
    • (2004) Arch Virol , vol.149 , pp. 1045-1060
    • Adams, M.J.1    Antoniw, J.F.2    Bar-Joseph, M.3    Brunt, A.A.4    Candresse, T.5
  • 34
    • 34848823671 scopus 로고    scopus 로고
    • Family Flexiviridae: A case study in virion and genome plasticity
    • PubMed: 17362202
    • Martelli GP, Adams MJ, Kreuze JF, Dolja VV (2007) Family Flexiviridae: a case study in virion and genome plasticity. Annu Rev Phytopathol 45: 73-100. PubMed: 17362202.
    • (2007) Annu Rev Phytopathol , vol.45 , pp. 73-100
    • Martelli, G.P.1    Adams, M.J.2    Kreuze, J.F.3    Dolja, V.V.4
  • 36
    • 0025784476 scopus 로고
    • Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: Two families with distinct patterns of sequence and probably structure conservation
    • PubMed: 1871982
    • Dolja VV, Boyko VP, Agranovsky AA, Koonin EV (1991) Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: two families with distinct patterns of sequence and probably structure conservation. Virology 184: 79-86. PubMed: 1871982.
    • (1991) Virology , vol.184 , pp. 79-86
    • Dolja, V.V.1    Boyko, V.P.2    Agranovsky, A.A.3    Koonin, E.V.4
  • 37
    • 0037977967 scopus 로고    scopus 로고
    • Triple gene block: Modular design of a multifunctional machine for plant virus movement
    • doi:10.1099/vir.0.18922-0. PubMed: 12771402
    • Morozov SY, Solovyev AG (2003) Triple gene block: modular design of a multifunctional machine for plant virus movement. J Gen Virol 84: 1351-1366. doi:10.1099/vir.0.18922-0. PubMed: 12771402.
    • (2003) J Gen Virol , vol.84 , pp. 1351-1366
    • Morozov, S.Y.1    Solovyev, A.G.2
  • 38
    • 0033971647 scopus 로고    scopus 로고
    • The '30K' superfamily of viral movement proteins
    • PubMed: 10640565
    • Melcher U (2000) The '30K' superfamily of viral movement proteins. J Gen Virol 81: 257-266. PubMed: 10640565.
    • (2000) J Gen Virol , vol.81 , pp. 257-266
    • Melcher, U.1
  • 39
    • 0028832792 scopus 로고
    • Tomato bushy stunt virus spread is regulated by two nested genes that function in cell-to-cell movement and host-dependent systemic invasion
    • doi:10.1006/viro.1995.0015. PubMed: 7491767
    • Scholthof HB, Scholthof K-BG, Kikkert M, Jackson AO (1995) Tomato bushy stunt virus spread is regulated by two nested genes that function in cell-to-cell movement and host-dependent systemic invasion. Virology 213: 425-438. doi:10.1006/viro.1995.0015. PubMed: 7491767.
    • (1995) Virology , vol.213 , pp. 425-438
    • Scholthof, H.B.1    Scholthof, K.-B.G.2    Kikkert, M.3    Jackson, A.O.4
  • 40
    • 79959612765 scopus 로고    scopus 로고
    • Hardenbergia virus A, a novel member of the Betaflexiviridae from a wild legume in South-West Australia
    • PubMed: 21394605
    • Wylie SJ, Jones MGK (2011) Hardenbergia virus A, a novel member of the Betaflexiviridae from a wild legume in South-West Australia. Arch Virol 156: 1245-1250. PubMed: 21394605.
    • (2011) Arch Virol , vol.156 , pp. 1245-1250
    • Wylie, S.J.1    Jones, M.G.K.2
  • 41
    • 84985438121 scopus 로고
    • Further studies on turnip yellow mosaic tymovirus isolates from an endemic Australian Cardamine
    • Guy PL, Gibbs AJ (1985) Further studies on turnip yellow mosaic tymovirus isolates from an endemic Australian Cardamine. Plant Pathol 34: 532-544.
    • (1985) Plant Pathol , vol.34 , pp. 532-544
    • Guy, P.L.1    Gibbs, A.J.2
  • 42
    • 0030024991 scopus 로고    scopus 로고
    • Genetic variation in populations of kennedya yellow mosaic tymovirus
    • PubMed: 8629954
    • Skotnicki ML, Mackenzie AM, Gibbs AJ (1996) Genetic variation in populations of kennedya yellow mosaic tymovirus. Arch Virol 141: 99-110. PubMed: 8629954.
    • (1996) Arch Virol , vol.141 , pp. 99-110
    • Skotnicki, M.L.1    Mackenzie, A.M.2    Gibbs, A.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.