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Volumn 9, Issue 1, 2014, Pages 27-36

RNA-mediated gene activation

Author keywords

Enhancer; Epigenetic; eRNA; lincRNA; Non coding RNA; RNAa; saRNA; Transcriptional activation

Indexed keywords

MICRORNA; SMALL INTERFERING RNA; UNTRANSLATED RNA;

EID: 84891926803     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.26942     Document Type: Article
Times cited : (68)

References (90)
  • 1
    • 24644519490 scopus 로고    scopus 로고
    • The transcriptional landscape of the mammalian genome
    • FANTOM Consortium; RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), PMID:16141072
    • Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, et al.; FANTOM Consortium; RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group). The transcriptional landscape of the mammalian genome. Science 2005; 309:1559-63. PMID:16141072; http://dx.doi.org/10.1126/science.1112014.
    • (2005) Science , vol.309 , pp. 1559-1563
    • Carninci, P.1    Kasukawa, T.2    Katayama, S.3    Gough, J.4    Frith, M.C.5    Maeda, N.6    Oyama, R.7    Ravasi, T.8    Lenhard, B.9    Wells, C.10
  • 2
    • 72449129174 scopus 로고    scopus 로고
    • A global view of genomic information--moving beyond the gene and the master regulator
    • PMID:19944475
    • Mattick JS, Taft RJ, Faulkner GJ. A global view of genomic information--moving beyond the gene and the master regulator. Trends Genet 2010; 26:21-8. PMID:19944475; http://dx.doi.org/10.1016/j.tig.2009.11.002.
    • (2010) Trends Genet , vol.26 , pp. 21-28
    • Mattick, J.S.1    Taft, R.J.2    Faulkner, G.J.3
  • 3
    • 33846984935 scopus 로고    scopus 로고
    • Transcriptional noise and the fidelity of initiation by RNA polymerase II
    • PMID:17277804
    • Struhl K. Transcriptional noise and the fidelity of initiation by RNA polymerase II. Nat Struct Mol Biol 2007; 14:103-5. PMID:17277804; http://dx.doi.org/10.1038/nsmb0207-103.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 103-105
    • Struhl, K.1
  • 4
    • 51049102332 scopus 로고    scopus 로고
    • Ripples from neighbouring transcription
    • PMID:19160492
    • Ebisuya M, Yamamoto T, Nakajima M, Nishida E. Ripples from neighbouring transcription. Nat Cell Biol 2008; 10:1106-13. PMID:19160492; http://dx.doi.org/10.1038/ncb1771.
    • (2008) Nat Cell Biol , vol.10 , pp. 1106-1113
    • Ebisuya, M.1    Yamamoto, T.2    Nakajima, M.3    Nishida, E.4
  • 5
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • PMID:22663078
    • Rinn JL, Chang HY. Genome regulation by long noncoding RNAs. Annu Rev Biochem 2012; 81:145-66. PMID:22663078; http://dx.doi.org/10.1146/ annurev-biochem-051410-092902.
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 6
    • 79959359296 scopus 로고    scopus 로고
    • Long antisense non-coding RNAs function to direct epigenetic complexes that regulate transcription in human cells
    • PMID:19633414
    • Morris KV. Long antisense non-coding RNAs function to direct epigenetic complexes that regulate transcription in human cells. Epigenetics 2009; 4:296-301. PMID:19633414; http://dx.doi.org/10.4161/epi.4.5.9282.
    • (2009) Epigenetics , vol.4 , pp. 296-301
    • Morris, K.V.1
  • 7
    • 80053045739 scopus 로고    scopus 로고
    • Molecular mechanisms of long noncoding RNAs
    • PMID:21925379
    • Wang KC, Chang HY. Molecular mechanisms of long noncoding RNAs. Mol Cell 2011; 43:904-14. PMID:21925379; http://dx.doi.org/10.1016/j.molcel.2011.08.018.
    • (2011) Mol Cell , vol.43 , pp. 904-914
    • Wang, K.C.1    Chang, H.Y.2
  • 9
    • 56549111129 scopus 로고    scopus 로고
    • The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin
    • PMID:18988810
    • Nagano T, Mitchell JA, Sanz LA, Pauler FM, Ferguson-Smith AC, Feil R, Fraser P. The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin. Science 2008; 322:1717-20. PMID:18988810; http://dx.doi.org/10.1126/ science.1163802.
    • (2008) Science , vol.322 , pp. 1717-1720
    • Nagano, T.1    Mitchell, J.A.2    Sanz, L.A.3    Pauler, F.M.4    Ferguson-Smith, A.C.5    Feil, R.6    Fraser, P.7
  • 10
    • 84872533627 scopus 로고    scopus 로고
    • RNA interference in the nucleus: Roles for small RNAs in transcription, epigenetics and beyond
    • PMID:23329111
    • Castel SE, Martienssen RA. RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond. Nat Rev Genet 2013; 14:100-12. PMID:23329111; http://dx.doi.org/10.1038/ nrg3355.
    • (2013) Nat Rev Genet , vol.14 , pp. 100-112
    • Castel, S.E.1    Martienssen, R.A.2
  • 11
    • 57149110631 scopus 로고    scopus 로고
    • Bidirectional transcription directs both transcriptional gene activation and suppression in human cells
    • PMID:19008947
    • Morris KV, Santoso S, Turner A-M, Pastori C, Hawkins PG. Bidirectional transcription directs both transcriptional gene activation and suppression in human cells. PLoS Genet 2008; 4:e1000258. PMID:19008947; http://dx.doi.org/10.1371/journal.pgen.1000258.
    • (2008) PLoS Genet , vol.4
    • Morris, K.V.1    Santoso, S.2    Turner, A.-M.3    Pastori, C.4    Hawkins, P.G.5
  • 12
    • 60149088848 scopus 로고    scopus 로고
    • Origins and Mechanisms of miRNAs and siRNAs
    • PMID:19239886
    • Carthew RW, Sontheimer EJ. Origins and Mechanisms of miRNAs and siRNAs. Cell 2009; 136:642-55. PMID:19239886; http://dx.doi. org/10.1016/j.cell.2009.01.035.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 13
    • 70350238350 scopus 로고    scopus 로고
    • The biogenesis and function of PIWI proteins and piRNAs: Progress and prospect
    • PMID:19575643
    • Thomson T, Lin H. The biogenesis and function of PIWI proteins and piRNAs: progress and prospect. Annu Rev Cell Dev Biol 2009; 25:355-76. PMID:19575643; http://dx.doi.org/10.1146/ annurev.cellbio.24.110707.175327.
    • (2009) Annu Rev Cell Dev Biol , vol.25 , pp. 355-376
    • Thomson, T.1    Lin, H.2
  • 14
    • 58849112575 scopus 로고    scopus 로고
    • Biogenesis of small RNAs in animals
    • PMID:19165215
    • Kim VN, Han J, Siomi MC. Biogenesis of small RNAs in animals. Nat Rev Mol Cell Biol 2009; 10:126-39. PMID:19165215; http://dx.doi. org/10.1038/nrm2632.
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 126-139
    • Kim, V.N.1    Han, J.2    Siomi, M.C.3
  • 15
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • PMID:14744438
    • Bartel DP, Lee R, Feinbaum R. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004; 116:281-97. PMID:14744438; http://dx.doi. org/10.1016/S0092-8674(04)00045-5.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1    Lee, R.2    Feinbaum, R.3
  • 16
    • 0345490960 scopus 로고    scopus 로고
    • The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes
    • PMID:14625589
    • Song J-J, Liu J, Tolia NH, Schneiderman J, Smith SK, Martienssen RA, Hannon GJ, Joshua-Tor L. The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes. Nat Struct Biol 2003; 10:1026-32. PMID:14625589; http://dx.doi.org/10.1038/nsb1016.
    • (2003) Nat Struct Biol , vol.10 , pp. 1026-1032
    • Song, J.-J.1    Liu, J.2    Tolia, N.H.3    Schneiderman, J.4    Smith, S.K.5    Martienssen, R.A.6    Hannon, G.J.7    Joshua-Tor, L.8
  • 18
    • 84883829306 scopus 로고    scopus 로고
    • New mechanisms in memory storage: PiRNAs and epigenetics
    • PMID:23397606
    • Landry CD, Kandel ER, Rajasethupathy P. New mechanisms in memory storage: piRNAs and epigenetics. Trends Neurosci 2013; 36:1-8. PMID:23397606.
    • (2013) Trends Neurosci , vol.36 , pp. 1-8
    • Landry, C.D.1    Kandel, E.R.2    Rajasethupathy, P.3
  • 19
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • PMID:12193640
    • Volpe TA, Kidner C, Hall IM, Teng G, Grewal SI, Martienssen RA. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 2002; 297:1833-7. PMID:12193640; http://dx.doi.org/10.1126/science.1074973.
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.5    Martienssen, R.A.6
  • 20
    • 15544363403 scopus 로고    scopus 로고
    • Specific and potent RNAi in the nucleus of human cells
    • PMID:15643423
    • Robb GB, Brown KM, Khurana J, Rana TM. Specific and potent RNAi in the nucleus of human cells. Nat Struct Mol Biol 2005; 12:133-7. PMID:15643423; http://dx.doi.org/10.1038/nsmb886.
    • (2005) Nat Struct Mol Biol , vol.12 , pp. 133-137
    • Robb, G.B.1    Brown, K.M.2    Khurana, J.3    Rana, T.M.4
  • 21
    • 83755183247 scopus 로고    scopus 로고
    • Nuclear RNAi maintains heritable gene silencing in Caenorhabditis elegans
    • PMID:22106253
    • Burton NO, Burkhart KB, Kennedy S. Nuclear RNAi maintains heritable gene silencing in Caenorhabditis elegans. Proc Natl Acad Sci U S A 2011; 108:19683-8. PMID:22106253; http://dx.doi.org/10.1073/ pnas.1113310108.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 19683-19688
    • Burton, N.O.1    Burkhart, K.B.2    Kennedy, S.3
  • 22
    • 4344705410 scopus 로고    scopus 로고
    • Small interfering RNA-induced transcriptional gene silencing in human cells
    • PMID:15297624
    • Morris KV, Chan SW-L, Jacobsen SE, Looney DJ. Small interfering RNA-induced transcriptional gene silencing in human cells. Science 2004; 305:1289-92. PMID:15297624; http://dx.doi.org/10.1126/ science.1101372.
    • (2004) Science , vol.305 , pp. 1289-1292
    • Morris, K.V.1    Chan, S.W.-L.2    Jacobsen, S.E.3    Looney, D.J.4
  • 24
    • 33646923128 scopus 로고    scopus 로고
    • Tethering RITS to a nascent transcript initiates RNAi-and heterochromatin-dependent gene silencing
    • PMID:16751098
    • Bühler M, Verdel A, Moazed D. Tethering RITS to a nascent transcript initiates RNAi-and heterochromatin-dependent gene silencing. Cell 2006; 125:873-86. PMID:16751098; http://dx.doi.org/10.1016/j. cell.2006.04.025.
    • (2006) Cell , vol.125 , pp. 873-886
    • Bühler, M.1    Verdel, A.2    Moazed, D.3
  • 25
    • 77953961505 scopus 로고    scopus 로고
    • Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription
    • PMID:20543824
    • Guang S, Bochner AF, Burkhart KB, Burton N, Pavelec DM, Kennedy S. Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. Nature 2010; 465:1097-101. PMID:20543824; http://dx.doi.org/10.1038/ nature09095.
    • (2010) Nature , vol.465 , pp. 1097-1101
    • Guang, S.1    Bochner, A.F.2    Burkhart, K.B.3    Burton, N.4    Pavelec, D.M.5    Kennedy, S.6
  • 29
    • 84860136644 scopus 로고    scopus 로고
    • Induction of NANOG expression by targeting promoter sequence with small activating RNA antagonizes retinoic acid-induced differentiation
    • PMID:22339500
    • Wang X, Wang J, Huang V, Place RF, Li L-C. Induction of NANOG expression by targeting promoter sequence with small activating RNA antagonizes retinoic acid-induced differentiation. Biochem J 2012; 443:821-8. PMID:22339500; http://dx.doi. org/10.1042/BJ20111491.
    • (2012) Biochem J , vol.443 , pp. 821-828
    • Wang, X.1    Wang, J.2    Huang, V.3    Place, R.F.4    Li, L.-C.5
  • 30
    • 33847081733 scopus 로고    scopus 로고
    • Activating gene expression in mammalian cells with promoter-targeted duplex RNAs
    • PMID:17259978
    • Janowski BA, Younger ST, Hardy DB, Ram R, Huffman KE, Corey DR. Activating gene expression in mammalian cells with promoter-targeted duplex RNAs. Nat Chem Biol 2007; 3:166-73. PMID:17259978; http://dx.doi.org/10.1038/ nchembio860.
    • (2007) Nat Chem Biol , vol.3 , pp. 166-173
    • Janowski, B.A.1    Younger, S.T.2    Hardy, D.B.3    Ram, R.4    Huffman, K.E.5    Corey, D.R.6
  • 31
  • 32
    • 84867277459 scopus 로고    scopus 로고
    • Promoterassociated small double-stranded RNA interacts with heterogeneous nuclear ribonucleoprotein A2/ B1 to induce transcriptional activation
    • PMID:23035981
    • Hu J, Chen Z, Xia D, Wu J, Xu H, Ye Z-Q. Promoterassociated small double-stranded RNA interacts with heterogeneous nuclear ribonucleoprotein A2/ B1 to induce transcriptional activation. Biochem J 2012; 447:407-16. PMID:23035981; http://dx.doi. org/10.1042/BJ20120256.
    • (2012) Biochem J , vol.447 , pp. 407-416
    • Hu, J.1    Chen, Z.2    Xia, D.3    Wu, J.4    Xu, H.5    Ye, Z.-Q.6
  • 33
    • 84862833567 scopus 로고    scopus 로고
    • Small RNA and transcriptional upregulation
    • PMID:21823233
    • Portnoy V, Huang V, Place RF, Li L-C. Small RNA and transcriptional upregulation. Wiley Interdiscip Rev RNA 2011; 2:748-60. PMID:21823233; http:// dx.doi.org/10.1002/wrna.90.
    • (2011) Wiley Interdiscip Rev RNA , vol.2 , pp. 748-760
    • Portnoy, V.1    Huang, V.2    Place, R.F.3    Li, L.-C.4
  • 34
    • 84877080452 scopus 로고    scopus 로고
    • Promoter-targeted doublestranded small RNAs activate PAWR gene expression in human cancer cells
    • PMID:23583662
    • Yang K, Shen J, Xie Y-Q, Lin Y-W, Qin J, Mao Q-Q, Zheng X-Y, Xie L-P. Promoter-targeted doublestranded small RNAs activate PAWR gene expression in human cancer cells. Int J Biochem Cell Biol 2013; 45:1338-46. PMID:23583662; http://dx.doi. org/10.1016/j.biocel.2013.03.022.
    • (2013) Int J Biochem Cell Biol , vol.45 , pp. 1338-1346
    • Yang, K.1    Shen, J.2    Xie, Y.-Q.3    Lin, Y.-W.4    Qin, J.5    Mao, Q.-Q.6    Zheng, X.-Y.7    Xie, L.-P.8
  • 35
    • 78650117232 scopus 로고    scopus 로고
    • MicroRNA-205-directed transcriptional activation of tumor suppressor genes in prostate cancer
    • PMID:20737563
    • Majid S, Dar AA, Saini S, Yamamura S, Hirata H, Tanaka Y, Deng G, Dahiya R. MicroRNA-205-directed transcriptional activation of tumor suppressor genes in prostate cancer. Cancer 2010; 116:5637-49. PMID:20737563; http://dx.doi. org/10.1002/cncr.25488.
    • (2010) Cancer , vol.116 , pp. 5637-5649
    • Majid, S.1    Dar, A.A.2    Saini, S.3    Yamamura, S.4    Hirata, H.5    Tanaka, Y.6    Deng, G.7    Dahiya, R.8
  • 36
    • 78650448697 scopus 로고    scopus 로고
    • Activation of LDL receptor expression by small RNAs complementary to a noncoding transcript that overlaps the LDLR promoter
    • PMID:21168770
    • Matsui M, Sakurai F, Elbashir S, Foster DJ, Manoharan M, Corey DR. Activation of LDL receptor expression by small RNAs complementary to a noncoding transcript that overlaps the LDLR promoter. Chem Biol 2010; 17:1344-55. PMID:21168770; http://dx.doi.org/10.1016/j.chembiol.2010.10.009.
    • (2010) Chem Biol , vol.17 , pp. 1344-1355
    • Matsui, M.1    Sakurai, F.2    Elbashir, S.3    Foster, D.J.4    Manoharan, M.5    Corey, D.R.6
  • 37
    • 84879414849 scopus 로고    scopus 로고
    • Argonaute proteins: Functional insights and emerging roles
    • PMID:23732335
    • Meister G. Argonaute proteins: functional insights and emerging roles. Nat Rev Genet 2013; 14:447-59. PMID:23732335; http://dx.doi.org/10.1038/ nrg3462.
    • (2013) Nat Rev Genet , vol.14 , pp. 447-459
    • Meister, G.1
  • 40
    • 84884692746 scopus 로고    scopus 로고
    • Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells
    • PMID:24086155
    • Huang V, Zheng J, Qi Z, Wang J, Place RF, Yu J, Li H, Li L-C. Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells. PLoS Genet 2013; 9:e1003821. PMID:24086155; http://dx.doi. org/10.1371/journal.pgen.1003821.
    • (2013) PLoS Genet , vol.9
    • Huang, V.1    Zheng, J.2    Qi, Z.3    Wang, J.4    Place, R.F.5    Yu, J.6    Li, H.7    Li, L.-C.8
  • 41
    • 78649874963 scopus 로고    scopus 로고
    • Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter
    • PMID:20675357
    • Chu Y, Yue X, Younger ST, Janowski BA, Corey DR. Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter. Nucleic Acids Res 2010; 38:7736-48. PMID:20675357; http://dx.doi.org/10.1093/nar/ gkq648.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7736-7748
    • Chu, Y.1    Yue, X.2    Younger, S.T.3    Janowski, B.A.4    Corey, D.R.5
  • 42
    • 34547626629 scopus 로고    scopus 로고
    • Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells
    • PMID:17640892
    • Han J, Kim D, Morris KV. Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells. Proc Natl Acad Sci U S A 2007; 104:12422-7. PMID:17640892; http://dx.doi. org/10.1073/pnas.0701635104.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 12422-12427
    • Han, J.1    Kim, D.2    Morris, K.V.3
  • 44
    • 84876177255 scopus 로고    scopus 로고
    • A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells
    • PMID:23435381
    • Johnsson P, Ackley A, Vidarsdottir L, Lui W-O, Corcoran M, Grandér D, Morris KV. A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells. Nat Struct Mol Biol 2013; 20:440-6. PMID:23435381; http:// dx.doi.org/10.1038/nsmb.2516.
    • (2013) Nat Struct Mol Biol , vol.20 , pp. 440-446
    • Johnsson, P.1    Ackley, A.2    Vidarsdottir, L.3    Lui, W.-O.4    Corcoran, M.5    Grandér, D.6    Morris, K.V.7
  • 47
    • 1642603947 scopus 로고    scopus 로고
    • A small modulatory dsRNA specifies the fate of adult neural stem cells
    • PMID:15035981
    • Kuwabara T, Hsieh J, Nakashima K, Taira K, Gage FH. A small modulatory dsRNA specifies the fate of adult neural stem cells. Cell 2004; 116:779-93. PMID:15035981; http://dx.doi.org/10.1016/ S0092-8674(04)00248-X
    • (2004) Cell , vol.116 , pp. 779-793
    • Kuwabara, T.1    Hsieh, J.2    Nakashima, K.3    Taira, K.4    Gage, F.H.5
  • 48
    • 40349094597 scopus 로고    scopus 로고
    • MicroRNA-373 induces expression of genes with complementary promoter sequences
    • PMID:18227514
    • Place RF, Li L-C, Pookot D, Noonan EJ, Dahiya R. MicroRNA-373 induces expression of genes with complementary promoter sequences. Proc Natl Acad Sci U S A 2008; 105:1608-13. PMID:18227514; http://dx.doi.org/10.1073/pnas.0707594105.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 1608-1613
    • Place, R.F.1    Li, L.-C.2    Pookot, D.3    Noonan, E.J.4    Dahiya, R.5
  • 50
    • 36048937264 scopus 로고    scopus 로고
    • An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster
    • PMID:17952056
    • Yin H, Lin H. An epigenetic activation role of Piwi and a Piwi-associated piRNA in Drosophila melanogaster. Nature 2007; 450:304-8. PMID:17952056; http://dx.doi.org/10.1038/nature06263.
    • (2007) Nature , vol.450 , pp. 304-308
    • Yin, H.1    Lin, H.2
  • 51
    • 84875256553 scopus 로고    scopus 로고
    • A major epigenetic programming mechanism guided by piRNAs
    • PMID:23434410
    • Huang XA, Yin H, Sweeney S, Raha D, Snyder M, Lin H. A major epigenetic programming mechanism guided by piRNAs. Dev Cell 2013; 24:502-16. PMID:23434410; http://dx.doi.org/10.1016/j. devcel.2013.01.023.
    • (2013) Dev Cell , vol.24 , pp. 502-516
    • Huang, X.A.1    Yin, H.2    Sweeney, S.3    Raha, D.4    Snyder, M.5    Lin, H.6
  • 52
    • 84863624978 scopus 로고    scopus 로고
    • C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts
    • PMID:22738724
    • Lee H-C, Gu W, Shirayama M, Youngman E, Conte D Jr., Mello CC. C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts. Cell 2012; 150:78-87. PMID:22738724; http:// dx.doi.org/10.1016/j.cell.2012.06.016.
    • (2012) Cell , vol.150 , pp. 78-87
    • Lee, H.-C.1    Gu, W.2    Shirayama, M.3    Youngman, E.4    Conte Jr., D.5    Mello, C.C.6
  • 54
    • 84863631177 scopus 로고    scopus 로고
    • piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline
    • PMID:22738726
    • Shirayama M, Seth M, Lee H-C, Gu W, Ishidate T, Conte D Jr., Mello CC. piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline. Cell 2012; 150:65-77. PMID:22738726; http://dx.doi.org/10.1016/j.cell.2012.06.015.
    • (2012) Cell , vol.150 , pp. 65-77
    • Shirayama, M.1    Seth, M.2    Lee, H.-C.3    Gu, W.4    Ishidate, T.5    Conte Jr., D.6    Mello, C.C.7
  • 56
    • 33646501507 scopus 로고    scopus 로고
    • Natural antisense and noncoding RNA transcripts as potential drug targets
    • PMID:16713901
    • Wahlestedt C. Natural antisense and noncoding RNA transcripts as potential drug targets. Drug Discov Today 2006; 11:503-8. PMID:16713901; http://dx.doi.org/10.1016/j.drudis.2006.04.013.
    • (2006) Drug Discov Today , vol.11 , pp. 503-508
    • Wahlestedt, C.1
  • 57
    • 38049155825 scopus 로고    scopus 로고
    • Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
    • PMID:18185590
    • Yu W, Gius D, Onyango P, Muldoon-Jacobs K, Karp J, Feinberg AP, Cui H. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 2008; 451:202-6. PMID:18185590; http://dx.doi.org/10.1038/nature06468.
    • (2008) Nature , vol.451 , pp. 202-206
    • Yu, W.1    Gius, D.2    Onyango, P.3    Muldoon-Jacobs, K.4    Karp, J.5    Feinberg, A.P.6    Cui, H.7
  • 58
    • 24644472515 scopus 로고    scopus 로고
    • Antisense transcription in the mammalian transcriptome
    • RIKEN Genome Exploration Research Group; Genome Science Group (Genome Network Project Core Group); FANTOM Consortium, PMID:16141073
    • Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, et al.; RIKEN Genome Exploration Research Group; Genome Science Group (Genome Network Project Core Group); FANTOM Consortium. Antisense transcription in the mammalian transcriptome. Science 2005; 309:1564-6. PMID:16141073; http://dx.doi.org/10.1126/science.1112009.
    • (2005) Science , vol.309 , pp. 1564-1566
    • Katayama, S.1    Tomaru, Y.2    Kasukawa, T.3    Waki, K.4    Nakanishi, M.5    Nakamura, M.6    Nishida, H.7    Yap, C.C.8    Suzuki, M.9    Kawai, J.10
  • 59
    • 84879987789 scopus 로고    scopus 로고
    • lincRNAs: Genomics, evolution, and mechanisms
    • PMID:23827673
    • Ulitsky I, Bartel DP. lincRNAs: genomics, evolution, and mechanisms. Cell 2013; 154:26-46. PMID:23827673; http://dx.doi.org/10.1016/j.cell.2013.06.020.
    • (2013) Cell , vol.154 , pp. 26-46
    • Ulitsky, I.1    Bartel, D.P.2
  • 60
    • 33846983276 scopus 로고    scopus 로고
    • Polycomb/Trithorax response elements and epigenetic memory of cell identity
    • PMID:17185323
    • Ringrose L, Paro R. Polycomb/Trithorax response elements and epigenetic memory of cell identity. Development 2007; 134:223-32. PMID:17185323; http://dx.doi.org/10.1242/dev.02723.
    • (2007) Development , vol.134 , pp. 223-232
    • Ringrose, L.1    Paro, R.2
  • 62
    • 33644514069 scopus 로고    scopus 로고
    • Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax
    • PMID:16497925
    • Sanchez-Elsner T, Gou D, Kremmer E, Sauer F. Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax. Science 2006; 311:1118-23. PMID:16497925; http://dx.doi.org/10.1126/science.1117705.
    • (2006) Science , vol.311 , pp. 1118-1123
    • Sanchez-Elsner, T.1    Gou, D.2    Kremmer, E.3    Sauer, F.4
  • 63
  • 64
    • 77954572735 scopus 로고    scopus 로고
    • Long noncoding RNA as modular scaffold of histone modification complexes
    • PMID:20616235
    • Tsai M-C, Manor O, Wan Y, Mosammaparast N, Wang JK, Lan F, Shi Y, Segal E, Chang HY. Long noncoding RNA as modular scaffold of histone modification complexes. Science 2010; 329:689-93. PMID:20616235; http://dx.doi.org/10.1126/science.1192002.
    • (2010) Science , vol.329 , pp. 689-693
    • Tsai, M.-C.1    Manor, O.2    Wan, Y.3    Mosammaparast, N.4    Wang, J.K.5    Lan, F.6    Shi, Y.7    Segal, E.8    Chang, H.Y.9
  • 67
    • 84860885909 scopus 로고    scopus 로고
    • A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy
    • PMID:22541069
    • Cabianca DS, Casa V, Bodega B, Xynos A, Ginelli E, Tanaka Y, Gabellini D. A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy. Cell 2012; 149:819-31. PMID:22541069; http://dx.doi.org/10.1016/j.cell.2012.03.035.
    • (2012) Cell , vol.149 , pp. 819-831
    • Cabianca, D.S.1    Casa, V.2    Bodega, B.3    Xynos, A.4    Ginelli, E.5    Tanaka, Y.6    Gabellini, D.7
  • 68
    • 84874025014 scopus 로고    scopus 로고
    • The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-γ locus
    • PMID:23415224
    • Gomez JA, Wapinski OL, Yang YW, Bureau JF, Gopinath S, Monack DM, Chang HY, Brahic M, Kirkegaard K. The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-γ locus. Cell 2013; 152:743-54. PMID:23415224; http://dx.doi.org/10.1016/j.cell.2013.01.015.
    • (2013) Cell , vol.152 , pp. 743-754
    • Gomez, J.A.1    Wapinski, O.L.2    Yang, Y.W.3    Bureau, J.F.4    Gopinath, S.5    Monack, D.M.6    Chang, H.Y.7    Brahic, M.8    Kirkegaard, K.9
  • 70
    • 84874368349 scopus 로고    scopus 로고
    • Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
    • PMID:23417068
    • Lai F, Orom UA, Cesaroni M, Beringer M, Taatjes DJ, Blobel GA, Shiekhattar R. Activating RNAs associate with Mediator to enhance chromatin architecture and transcription. Nature 2013; 494:497-501. PMID:23417068; http://dx.doi.org/10.1038/nature11884.
    • (2013) Nature , vol.494 , pp. 497-501
    • Lai, F.1    Orom, U.A.2    Cesaroni, M.3    Beringer, M.4    Taatjes, D.J.5    Blobel, G.A.6    Shiekhattar, R.7
  • 71
    • 79952901680 scopus 로고    scopus 로고
    • Enhancer function: New insights into the regulation of tissue-specific gene expression
    • PMID:21358745
    • Ong C-T, Corces VG. Enhancer function: new insights into the regulation of tissue-specific gene expression. Nat Rev Genet 2011; 12:283-93. PMID:21358745; http://dx.doi.org/10.1038/nrg2957.
    • (2011) Nat Rev Genet , vol.12 , pp. 283-293
    • Ong, C.-T.1    Corces, V.G.2
  • 72
    • 84870182699 scopus 로고    scopus 로고
    • Noncoding transcription at enhancers: General principles and functional models
    • PMID:22905871
    • Natoli G, Andrau J-C. Noncoding transcription at enhancers: general principles and functional models. Annu Rev Genet 2012; 46:1-19. PMID:22905871; http://dx.doi.org/10.1146/annurev-genet-110711-155459.
    • (2012) Annu Rev Genet , vol.46 , pp. 1-19
    • Natoli, G.1    Andrau, J.-C.2
  • 74
  • 79
    • 79959198166 scopus 로고    scopus 로고
    • Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA
    • PMID:21572438
    • Wang D, Garcia-Bassets I, Benner C, Li W, Su X, Zhou Y, Qiu J, Liu W, Kaikkonen MU, Ohgi KA, et al. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature 2011; 474:390-4. PMID:21572438; http://dx.doi.org/10.1038/nature10006.
    • (2011) Nature , vol.474 , pp. 390-394
    • Wang, D.1    Garcia-Bassets, I.2    Benner, C.3    Li, W.4    Su, X.5    Zhou, Y.6    Qiu, J.7    Liu, W.8    Kaikkonen, M.U.9    Ohgi, K.A.10
  • 80
    • 84881171344 scopus 로고    scopus 로고
    • Enhancer transcripts mark active estrogen receptor binding sites
    • PMID:23636943
    • Hah N, Murakami S, Nagari A, Danko CG, Kraus WL. Enhancer transcripts mark active estrogen receptor binding sites. Genome Res 2013; 23:1210-23. PMID:23636943; http://dx.doi.org/10.1101/gr.152306.112.
    • (2013) Genome Res , vol.23 , pp. 1210-1223
    • Hah, N.1    Murakami, S.2    Nagari, A.3    Danko, C.G.4    Kraus, W.L.5
  • 81
    • 84879695128 scopus 로고    scopus 로고
    • Functional roles of enhancer RNAs for oestrogendependent transcriptional activation
    • PMID:23728302
    • Li W, Notani D, Ma Q, Tanasa B, Nunez E, Chen AY, Merkurjev D, Zhang J, Ohgi K, Song X, et al. Functional roles of enhancer RNAs for oestrogendependent transcriptional activation. Nature 2013; 498:516-20. PMID:23728302; http://dx.doi.org/10.1038/nature12210.
    • (2013) Nature , vol.498 , pp. 516-520
    • Li, W.1    Notani, D.2    Ma, Q.3    Tanasa, B.4    Nunez, E.5    Chen, A.Y.6    Merkurjev, D.7    Zhang, J.8    Ohgi, K.9    Song, X.10
  • 82
    • 84885185420 scopus 로고    scopus 로고
    • eRNAs reach the heart of transcription
    • PMID:23282893
    • Melo C a. Léveillé N, Agami R. eRNAs reach the heart of transcription. Cell Res 2013; 23:1-2. PMID:23282893.
    • (2013) Cell Res , vol.23 , pp. 1-2
    • Melo, C.1    Léveillé, N.2    Agami, R.3
  • 84
    • 79956073017 scopus 로고    scopus 로고
    • Potential in vivo roles of nucleic acid triple-helices
    • PMID:21525785
    • Buske FA, Mattick JS, Bailey TL. Potential in vivo roles of nucleic acid triple-helices. RNA Biol 2011; 8:427-39. PMID:21525785; http://dx.doi.org/10.4161/rna.8.3.14999.
    • (2011) RNA Biol , vol.8 , pp. 427-439
    • Buske, F.A.1    Mattick, J.S.2    Bailey, T.L.3
  • 86
    • 36749026906 scopus 로고    scopus 로고
    • Switching from repression to activation: MicroRNAs can up-regulate translation
    • PMID:18048652
    • Vasudevan S, Tong Y, Steitz JA. Switching from repression to activation: microRNAs can up-regulate translation. Science 2007; 318:1931-4. PMID:18048652; http://dx.doi.org/10.1126/science.1149460.
    • (2007) Science , vol.318 , pp. 1931-1934
    • Vasudevan, S.1    Tong, Y.2    Steitz, J.A.3
  • 87
    • 77953411618 scopus 로고    scopus 로고
    • MicroRNA-466l upregulates IL-10 expression in TLR-triggered macrophages by antagonizing RNAbinding protein tristetraprolin-mediated IL-10 mRNA degradation
    • PMID:20410487
    • Ma F, Liu X, Li D, Wang P, Li N, Lu L, Cao X. MicroRNA-466l upregulates IL-10 expression in TLR-triggered macrophages by antagonizing RNAbinding protein tristetraprolin-mediated IL-10 mRNA degradation. J Immunol 2010; 184:6053-9. PMID:20410487; http://dx.doi.org/10.4049/jimmunol.0902308.
    • (2010) J Immunol , vol.184 , pp. 6053-6059
    • Ma, F.1    Liu, X.2    Li, D.3    Wang, P.4    Li, N.5    Lu, L.6    Cao, X.7
  • 88
    • 84863005508 scopus 로고    scopus 로고
    • Autoregulation of microRNA biogenesis by let-7 and Argonaute
    • PMID:22722835
    • Zisoulis DG, Kai ZS, Chang RK, Pasquinelli AE. Autoregulation of microRNA biogenesis by let-7 and Argonaute. Nature 2012; 486:541-4. PMID:22722835.
    • (2012) Nature , vol.486 , pp. 541-544
    • Zisoulis, D.G.1    Kai, Z.S.2    Chang, R.K.3    Pasquinelli, A.E.4
  • 89
    • 79961170994 scopus 로고    scopus 로고
    • A ceRNA hypothesis: The Rosetta Stone of a hidden RNA language?
    • PMID:21802130
    • Salmena L, Poliseno L, Tay Y, Kats L, Pandolfi PP. A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell 2011; 146:353-8. PMID:21802130; http://dx.doi.org/10.1016/j.cell.2011.07.014.
    • (2011) Cell , vol.146 , pp. 353-358
    • Salmena, L.1    Poliseno, L.2    Tay, Y.3    Kats, L.4    Pandolfi, P.P.5


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