-
1
-
-
77950865786
-
Highlights of mycoplasma research. An historical perspective
-
doi:10.1016/j.biologicals.2009.11.008. PubMed: 20149687
-
Razin S, Hayflick L (2010) Highlights of mycoplasma research. An historical perspective. Biologicals 38: 183-190. doi:10.1016/j.biologicals.2009. 11.008. PubMed: 20149687.
-
(2010)
Biologicals
, vol.38
, pp. 183-190
-
-
Razin, S.1
Hayflick, L.2
-
2
-
-
0031770391
-
Molecular biology and pathogenicity of mycoplasmas
-
PubMed: 9841667
-
Razin S, Yogev D, Naot Y (1998) Molecular biology and pathogenicity of mycoplasmas. Microbiol Mol Biol Rev 62: 1094-1156. PubMed: 9841667.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 1094-1156
-
-
Razin, S.1
Yogev, D.2
Naot, Y.3
-
3
-
-
0031441913
-
The comparative metabolism of the Mollicutes (Mycoplasmas): The utility for taxonomic classification and the relationship of putative gene annotation and phylogeny to enzymic function in the smallest free-living cells
-
doi:10.3109/10408419709115140. PubMed: 9439886
-
Pollack JD, Williams MV, Mcelhaney RN (1997) The comparative metabolism of the Mollicutes (Mycoplasmas): the utility for taxonomic classification and the relationship of putative gene annotation and phylogeny to enzymic function in the smallest free-living cells. Crit Rev Microbiol 23: 269-354. doi:10.3109/10408419709115140. PubMed: 9439886.
-
(1997)
Crit Rev Microbiol
, vol.23
, pp. 269-354
-
-
Pollack, J.D.1
Williams, M.V.2
Mcelhaney, R.N.3
-
4
-
-
0023052449
-
Phase equilibria of membrane lipids from Acholeplasma laidlawii: Importance of a single lipid forming nonlamellar phases
-
doi:10.1021/bi00371a037. PubMed: 3801429
-
Lindblom G, Brentel I, Sjölund M, Wikander G, Wieslander A (1986) Phase equilibria of membrane lipids from Acholeplasma laidlawii: importance of a single lipid forming nonlamellar phases. Biochemistry 25: 7502-7510. doi:10.1021/bi00371a037. PubMed: 3801429.
-
(1986)
Biochemistry
, vol.25
, pp. 7502-7510
-
-
Lindblom, G.1
Brentel, I.2
Sjölund, M.3
Wikander, G.4
Wieslander, A.5
-
5
-
-
0028800111
-
Efficient modulation of glucolipid enzyme activities in membranes of Acholeplasma laidlawii by the type of lipids in the bilayer matrix
-
doi:10.1021/bi00041a015. PubMed: 7577924
-
Dahlqvist A, Nordström S, Karlsson OP, Mannock DA, McElhaney RN et al. (1995) Efficient modulation of glucolipid enzyme activities in membranes of Acholeplasma laidlawii by the type of lipids in the bilayer matrix. Biochemistry 34: 13381-13389. doi:10.1021/bi00041a015. PubMed: 7577924.
-
(1995)
Biochemistry
, vol.34
, pp. 13381-13389
-
-
Dahlqvist, A.1
Nordström, S.2
Karlsson, O.P.3
Mannock, D.A.4
McElhaney, R.N.5
-
6
-
-
0033608954
-
Key role of the diglucosyldiacylglycerol synthase for the nonbilayer-bilayer lipid balance of Acholeplasma laidlawii membranes
-
doi:10.1021/bi982532m. PubMed: 10220338
-
Vikström S, Li L, Karlsson OP, Wieslander A (1999) Key role of the diglucosyldiacylglycerol synthase for the nonbilayer-bilayer lipid balance of Acholeplasma laidlawii membranes. Biochemistry 38: 5511-5520. doi:10.1021/bi982532m. PubMed: 10220338.
-
(1999)
Biochemistry
, vol.38
, pp. 5511-5520
-
-
Vikström, S.1
Li, L.2
Karlsson, O.P.3
Wieslander, A.4
-
7
-
-
84861745137
-
Bacterial glycoglycerolipid synthases: Processive and non-processive glycosyltransferases in mycoplasma
-
doi:10.3109/10242422.2012.674733
-
Andrés E, Biarnés X, Faijes M, Planas A (2012) Bacterial glycoglycerolipid synthases: processive and non-processive glycosyltransferases in mycoplasma. Biocatal Biotransform 30: 274-287. doi:10.3109/10242422.2012. 674733.
-
(2012)
Biocatal Biotransform
, vol.30
, pp. 274-287
-
-
Andrés, E.1
Biarnés, X.2
Faijes, M.3
Planas, A.4
-
8
-
-
0030843984
-
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities
-
PubMed: 9334165
-
Campbell JA, Davies GJ, Bulone V, Henrissat B (1997) A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities. Biochem J 326: 929-939. PubMed: 9334165.
-
(1997)
Biochem J
, vol.326
, pp. 929-939
-
-
Campbell, J.A.1
Davies, G.J.2
Bulone, V.3
Henrissat, B.4
-
9
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): An expert resource for Glycogenomics
-
doi:10.1093/nar/gkn663. PubMed: 18838391
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V et al. (2009) The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res 37: D233-D238. doi:10.1093/nar/gkn663. PubMed: 18838391.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
-
10
-
-
49449087287
-
Glycosyltransferases: Structures, functions, and mechanisms
-
doi:10.1146/annurev.biochem.76.061005.092322. PubMed: 18518825
-
Lairson LL, Henrissat B, Davies GJ, Withers SG (2008) Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem 77: 521-555. doi:10.1146/annurev.biochem.76.061005.092322. PubMed: 18518825.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 521-555
-
-
Lairson, L.L.1
Henrissat, B.2
Davies, G.J.3
Withers, S.G.4
-
11
-
-
84867747900
-
Recent structures, evolution and mechanisms of glycosyltransferases
-
doi:10.1016/j.sbi.2012.06.007. PubMed: 22819665
-
Breton C, Fournel-Gigleux S, Palcic MM (2012) Recent structures, evolution and mechanisms of glycosyltransferases. Curr Opin Struct Biol 22: 540-549. doi:10.1016/j.sbi.2012.06.007. PubMed: 22819665.
-
(2012)
Curr Opin Struct Biol
, vol.22
, pp. 540-549
-
-
Breton, C.1
Fournel-Gigleux, S.2
Palcic, M.M.3
-
12
-
-
34548363832
-
A processive lipid glycosyltransferase in the small human pathogen Mycoplasma pneumoniae: Involvement in host immune response
-
doi:10.1111/j.1365-2958.2007.05865.x. PubMed: 17697098
-
Klement MLR, Ojemyr L, Tagscherer KE, Widmalm G, Wieslander A (2007) A processive lipid glycosyltransferase in the small human pathogen Mycoplasma pneumoniae: involvement in host immune response. Mol Microbiol 65: 1444-1457. doi:10.1111/j.1365-2958.2007.05865.x. PubMed: 17697098.
-
(2007)
Mol Microbiol
, vol.65
, pp. 1444-1457
-
-
Klement, M.L.R.1
Ojemyr, L.2
Tagscherer, K.E.3
Widmalm, G.4
Wieslander, A.5
-
13
-
-
80053919253
-
Expression and characterization of a Mycoplasma genitalium glycosyltransferase in membrane glycolipid biosynthesis: Potential target against mycoplasma infections
-
doi:10.1074/jbc.M110.214148. PubMed: 21835921
-
Andrés E, Martínez N, Planas A (2011) Expression and characterization of a Mycoplasma genitalium glycosyltransferase in membrane glycolipid biosynthesis: potential target against mycoplasma infections. J Biol Chem 286: 35367-35379. doi:10.1074/jbc.M110.214148. PubMed: 21835921.
-
(2011)
J Biol Chem
, vol.286
, pp. 35367-35379
-
-
Andrés, E.1
Martínez, N.2
Planas, A.3
-
14
-
-
33645880477
-
The atypical pneumonias: Clinical diagnosis and importance
-
12-24
-
Cunha BA (2006) The atypical pneumonias: clinical diagnosis and importance. Clin Microbiol Infect 12 Suppl 3:12-24.: 12-24
-
(2006)
Clin Microbiol Infect
, vol.12
, Issue.SUPPL. 3
, pp. 12-24
-
-
Cunha, B.A.1
-
15
-
-
84862491013
-
The role of atypical pathogens in community-acquired pneumonia
-
doi:10.1055/s-0032-1315636. PubMed: 22718210
-
Marrie TJ, Costain N, La SB, Patrick W, Forgie S, Xu Z et al. (2012) The role of atypical pathogens in community-acquired pneumonia. Semin Respir Crit Care Med 33: 244-256. doi:10.1055/s-0032-1315636. PubMed: 22718210.
-
(2012)
Semin Respir Crit Care Med
, vol.33
, pp. 244-256
-
-
Marrie, T.J.1
Costain, N.2
La, S.B.3
Patrick, W.4
Forgie, S.5
Xu, Z.6
-
16
-
-
0027305503
-
Association of Mycoplasma genitalium with acute non-gonococcal urethritis
-
doi:10.1016/0140-6736(93)91411-E. PubMed: 8102721
-
Horner PJ, Gilroy CB, Thomas BJ, Naidoo RO, Taylor-Robinson D (1993) Association of Mycoplasma genitalium with acute non-gonococcal urethritis. Lancet 342: 582-585. doi:10.1016/0140-6736(93)91411-E. PubMed: 8102721.
-
(1993)
Lancet
, vol.342
, pp. 582-585
-
-
Horner, P.J.1
Gilroy, C.B.2
Thomas, B.J.3
Naidoo, R.O.4
Taylor-Robinson, D.5
-
17
-
-
13544271664
-
Signs and symptoms of urethritis and cervicitis among women with or without Mycoplasma genitalium or Chlamydia trachomatis infection
-
doi:10.1136/sti.2004.010439. PubMed: 15681728
-
Falk L, Fredlund H, Jensen JS (2005) Signs and symptoms of urethritis and cervicitis among women with or without Mycoplasma genitalium or Chlamydia trachomatis infection. Sex Transm Infect 81: 73-78. doi:10.1136/sti.2004.010439. PubMed: 15681728.
-
(2005)
Sex Transm Infect
, vol.81
, pp. 73-78
-
-
Falk, L.1
Fredlund, H.2
Jensen, J.S.3
-
18
-
-
0037424229
-
Structural features of glycosyltransferases synthesizing major bilayer and nonbilayer-prone membrane lipids in Acholeplasma laidlawii and Streptococcus pneumoniae
-
doi:10.1074/jbc.M211492200. PubMed: 12464611
-
Edman M, Berg S, Storm P, Wikström M, Vikström S et al. (2003) Structural features of glycosyltransferases synthesizing major bilayer and nonbilayer-prone membrane lipids in Acholeplasma laidlawii and Streptococcus pneumoniae. J Biol Chem 278: 8420-8428. doi:10.1074/jbc.M211492200. PubMed: 12464611.
-
(2003)
J Biol Chem
, vol.278
, pp. 8420-8428
-
-
Edman, M.1
Berg, S.2
Storm, P.3
Wikström, M.4
Vikström, S.5
-
19
-
-
27144556229
-
Molecular modeling and site-directed mutagenesis of plant chloroplast monogalactosyldiacylglycerol synthase reveal critical residues for activity
-
doi:10.1074/jbc.M505622200. PubMed: 16009708
-
Botté C, Jeanneau C, Snajdrova L, Bastien O, Imberty A et al. (2005) Molecular modeling and site-directed mutagenesis of plant chloroplast monogalactosyldiacylglycerol synthase reveal critical residues for activity. J Biol Chem 280: 34691-34701. doi:10.1074/jbc.M505622200. PubMed: 16009708.
-
(2005)
J Biol Chem
, vol.280
, pp. 34691-34701
-
-
Botté, C.1
Jeanneau, C.2
Snajdrova, L.3
Bastien, O.4
Imberty, A.5
-
20
-
-
56649112704
-
Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: Structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis
-
doi:10.1371/journal.pone.0003748. PubMed: 19015727
-
Pereira PJB, Empadinhas N, Albuquerque L, Sá-Moura B, da Costa MS et al. (2008) Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis. PLOS ONE 3: e3748. doi:10.1371/journal.pone.0003748. PubMed: 19015727.
-
(2008)
PLOS ONE
, vol.3
-
-
Pereira, P.J.B.1
Empadinhas, N.2
Albuquerque, L.3
Sá-Moura, B.4
Da Costa, M.S.5
-
21
-
-
79955426783
-
Substrate and metal ion promiscuity in mannosylglycerate synthase
-
doi:10.1074/jbc.M110.199844. PubMed: 21288903
-
Nielsen MM, Suits MDL, Yang M, Barry CS, Martinez-Fleites C et al. (2011) Substrate and metal ion promiscuity in mannosylglycerate synthase. J Biol Chem 286: 15155-15164. doi:10.1074/jbc.M110.199844. PubMed: 21288903.
-
(2011)
J Biol Chem
, vol.286
, pp. 15155-15164
-
-
Nielsen, M.M.1
Suits, M.D.L.2
Yang, M.3
Barry, C.S.4
Martinez-Fleites, C.5
-
22
-
-
0035190313
-
Identification of Residues Involved in Catalytic Activity of the Inverting Glycosyl Transferase WbbE from Salmonella enterica Serovar Borreze
-
PubMed: 11114903
-
Keenleyside WJ, Clarke AJ, Whitfield C (2001) Identification of Residues Involved in Catalytic Activity of the Inverting Glycosyl Transferase WbbE from Salmonella enterica Serovar Borreze. J Bacteriol 183: 77-85. PubMed: 11114903.
-
(2001)
J Bacteriol
, vol.183
, pp. 77-85
-
-
Keenleyside, W.J.1
Clarke, A.J.2
Whitfield, C.3
-
23
-
-
55549117483
-
Crystal structure of a UDP-glucose-specific glycosyltransferase from a Mycobacterium species
-
doi:10.1074/jbc.M801853200. PubMed: 18667419
-
Fulton Z, McAlister A, Wilce MCJ, Brammananth R, Zaker-Tabrizi L et al. (2008) Crystal structure of a UDP-glucose-specific glycosyltransferase from a Mycobacterium species. J Biol Chem 283: 27881-27890. doi:10.1074/jbc.M801853200. PubMed: 18667419.
-
(2008)
J Biol Chem
, vol.283
, pp. 27881-27890
-
-
Fulton, Z.1
McAlister, A.2
Wilce, M.C.J.3
Brammananth, R.4
Zaker-Tabrizi, L.5
-
24
-
-
0035824876
-
Three-dimensional structures of the Mn and Mg dTDP complexes of the family GT-2 glycosyltransferase SpsA: A comparison with related NDP-sugar glycosyltransferases
-
doi:10.1006/jmbi.2001.5159. PubMed: 11733986
-
Tarbouriech N, Charnock SJ, Davies GJ (2001) Three-dimensional structures of the Mn and Mg dTDP complexes of the family GT-2 glycosyltransferase SpsA: a comparison with related NDP-sugar glycosyltransferases. J Mol Biol 314: 655-661. doi:10.1006/jmbi.2001.5159. PubMed: 11733986.
-
(2001)
J Mol Biol
, vol.314
, pp. 655-661
-
-
Tarbouriech, N.1
Charnock, S.J.2
Davies, G.J.3
-
25
-
-
0034613392
-
Identification of essential amino acid residues in the Sinorhizobium meliloti glucosyltransferase ExoM
-
doi:10.1074/jbc.M004524200. PubMed: 10908566
-
Garinot-Schneider C, Lellouch AC, Geremia RA (2000) Identification of essential amino acid residues in the Sinorhizobium meliloti glucosyltransferase ExoM. J Biol Chem 275: 31407-31413. doi:10.1074/jbc.M004524200. PubMed: 10908566.
-
(2000)
J Biol Chem
, vol.275
, pp. 31407-31413
-
-
Garinot-Schneider, C.1
Lellouch, A.C.2
Geremia, R.A.3
-
26
-
-
7444220526
-
The beginnings of mucin biosynthesis: The crystal structure of UDP-GalNAc:polypeptide alpha-N-acetylgalactosaminyltransferase-T1
-
doi:10.1073/pnas.0405657101. PubMed: 15486088
-
Fritz TA, Hurley JH, Trinh LB, Shiloach J, Tabak LA (2004) The beginnings of mucin biosynthesis: the crystal structure of UDP-GalNAc:polypeptide alpha-N-acetylgalactosaminyltransferase-T1. Proc Natl Acad Sci U S A 101: 15307-15312. doi:10.1073/pnas.0405657101. PubMed: 15486088.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 15307-15312
-
-
Fritz, T.A.1
Hurley, J.H.2
Trinh, L.B.3
Shiloach, J.4
Tabak, L.A.5
-
27
-
-
0345254937
-
Roles of individual enzyme-substrate interactions by alpha-1,3- galactosyltransferase in catalysis and specificity
-
doi:10.1021/bi035430r. PubMed: 14621997
-
Zhang Y, Swaminathan GJ, Deshpande A, Boix E, Natesh R et al. (2003) Roles of individual enzyme-substrate interactions by alpha-1,3- galactosyltransferase in catalysis and specificity. Biochemistry 42: 13512-13521. doi:10.1021/bi035430r. PubMed: 14621997.
-
(2003)
Biochemistry
, vol.42
, pp. 13512-13521
-
-
Zhang, Y.1
Swaminathan, G.J.2
Deshpande, A.3
Boix, E.4
Natesh, R.5
-
28
-
-
0036725060
-
The structural basis for specificity in human ABO(H) blood group biosynthesis
-
doi:10.1038/nsb832. PubMed: 12198488
-
Patenaude SI, Seto NO, Borisova SN, Szpacenko A, Marcus SL et al. (2002) The structural basis for specificity in human ABO(H) blood group biosynthesis. Nat Struct Biol 9: 685-690. doi:10.1038/nsb832. PubMed: 12198488.
-
(2002)
Nat Struct Biol
, vol.9
, pp. 685-690
-
-
Patenaude, S.I.1
Seto, N.O.2
Borisova, S.N.3
Szpacenko, A.4
Marcus, S.L.5
-
29
-
-
84863798084
-
Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria
-
doi:10.1074/jbc.M112.368191. PubMed: 22637481
-
Urresti S, Albesa-Jové D, Schaeffer F, Pham HT, Kaur D et al. (2012) Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria. J Biol Chem 287: 24649-24661. doi:10.1074/jbc.M112. 368191. PubMed: 22637481.
-
(2012)
J Biol Chem
, vol.287
, pp. 24649-24661
-
-
Urresti, S.1
Albesa-Jové, D.2
Schaeffer, F.3
Pham, H.T.4
Kaur, D.5
-
30
-
-
19544388989
-
Multiple flexible structure alignment using partial order graphs
-
doi:10.1093/bioinformatics/bti353. PubMed: 15746292
-
Ye Y, Godzik A (2005) Multiple flexible structure alignment using partial order graphs. Bioinformatics 21: 2362-2369. doi:10.1093/bioinformatics/bti353. PubMed: 15746292.
-
(2005)
Bioinformatics
, vol.21
, pp. 2362-2369
-
-
Ye, Y.1
Godzik, A.2
-
31
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
doi:10.1002/bip.360221211. PubMed: 6667333
-
Kabsch W, Sander C (1983) Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22: 2577-2637. doi:10.1002/bip.360221211. PubMed: 6667333.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
32
-
-
23144444979
-
Protein structure prediction servers at University College London
-
doi:10.1093/nar/gni035. PubMed: 15980489
-
Bryson K, McGuffin LJ, Marsden RL, Ward JJ, Sodhi JS et al. (2005) Protein structure prediction servers at University College London. Nucleic Acids Res 33: W36-W38. doi:10.1093/nar/gni035. PubMed: 15980489.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Bryson, K.1
McGuffin, L.J.2
Marsden, R.L.3
Ward, J.J.4
Sodhi, J.S.5
-
33
-
-
34248532415
-
PROMALS: Towards accurate multiple sequence alignments of distantly related proteins
-
doi:10.1093/bioinformatics/btm017. PubMed: 17267437
-
Pei J, Grishin NV (2007) PROMALS: towards accurate multiple sequence alignments of distantly related proteins. Bioinformatics 23: 802-808. doi:10.1093/bioinformatics/btm017. PubMed: 17267437.
-
(2007)
Bioinformatics
, vol.23
, pp. 802-808
-
-
Pei, J.1
Grishin, N.V.2
-
34
-
-
0029878720
-
VMD: Visual molecular dynamics
-
doi:10.1016/0263-7855(96)00018-5. PubMed: 8744570
-
Humphrey W, Dalke A, Schulten K (1996) VMD: Visual molecular dynamics. J Mol Graph 14: 33-38. doi:10.1016/0263-7855(96)00018-5. PubMed: 8744570.
-
(1996)
J Mol Graph
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
35
-
-
79959931985
-
HMMER web server: Interactive sequence similarity searching
-
doi:10.1093/nar/gkr367. PubMed: 21593126
-
Finn RD, Clements J, Eddy SR (2011) HMMER web server: interactive sequence similarity searching. Nucleic Acids Res 39: W29-W37. doi:10.1093/nar/gkr367. PubMed: 21593126.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Finn, R.D.1
Clements, J.2
Eddy, S.R.3
-
36
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
PubMed: 3447015
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425. PubMed: 3447015.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
37
-
-
0033990046
-
Phylogenetic analysis using PHYLIP
-
PubMed: 10547839
-
Retief JD (2000) Phylogenetic analysis using PHYLIP. Methods Mol Biol 132: 243-258. PubMed: 10547839.
-
(2000)
Methods Mol Biol
, vol.132
, pp. 243-258
-
-
Retief, J.D.1
-
38
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
doi:10.1006/jmbi.1993.1626. PubMed: 8254673
-
Sali A, Blundell TL (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234: 779-815. doi:10.1006/jmbi.1993.1626. PubMed: 8254673.
-
(1993)
J Mol Biol
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
39
-
-
0033810049
-
Modeling of loops in protein structures
-
doi:10.1110/ps.9.9.1753. PubMed: 11045621
-
Fiser A, Do RK, Sali A (2000) Modeling of loops in protein structures. Protein Sci 9: 1753-1773. doi:10.1110/ps.9.9.1753. PubMed: 11045621.
-
(2000)
Protein Sci
, vol.9
, pp. 1753-1773
-
-
Fiser, A.1
Do, R.K.2
Sali, A.3
-
40
-
-
33749578940
-
Statistical potential for assessment and prediction of protein structures
-
doi:10.1110/ps.062416606. PubMed: 17075131
-
Shen MY, Sali A (2006) Statistical potential for assessment and prediction of protein structures. Protein Sci 15: 2507-2524. doi:10.1110/ps.062416606. PubMed: 17075131.
-
(2006)
Protein Sci
, vol.15
, pp. 2507-2524
-
-
Shen, M.Y.1
Sali, A.2
-
41
-
-
0000243829
-
PROCHECK a program to check the stereochemical quality of protein structures
-
Volumes 1993 20: 19; doi:10.1107/S0021889892009944
-
Laskowski RA Volumes 1993 20: 19 (1993); PROCHECK a program to check the stereochemical quality of protein structures. J Appl Crystallography 26: 283-291 doi:10.1107/S0021889892009944.
-
(1993)
J Appl Crystallography
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
-
42
-
-
0029633168
-
GROMACS: A message-passing parallel molecular dynamics implementation
-
Berendsen HJC (1991) GROMACS: a message-passing parallel molecular dynamics implementation. Comp Phys Comm 91: 43-56
-
(1991)
Comp Phys Comm
, vol.91
, pp. 43-56
-
-
Berendsen, H.J.C.1
-
43
-
-
23144457576
-
H++: A server for estimating pKas and adding missing hydrogens to macromolecules
-
doi:10.1093/nar/gki464. PubMed: 15980491
-
Gordon JC, Myers JB, Folta T, Shoja V, Heath LS et al. (2005) H++: a server for estimating pKas and adding missing hydrogens to macromolecules. Nucleic Acids Res 33: W368-W371. doi:10.1093/nar/gki464. PubMed: 15980491.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Gordon, J.C.1
Myers, J.B.2
Folta, T.3
Shoja, V.4
Heath, L.S.5
-
44
-
-
0042357447
-
Potential Energy Hypersurfaces of Nucleotide Sugars: Ab Initio Calculations, Force-Field Parametrization, and Exploration of the Flexibility
-
doi:10.1021/ja983854g
-
Petrová P, Koca J, Imberty A (1999) Potential Energy Hypersurfaces of Nucleotide Sugars: Ab Initio Calculations, Force-Field Parametrization, and Exploration of the Flexibility. J Am Chem Soc 121: 5535-5547. doi:10.1021/ja983854g.
-
(1999)
J Am Chem Soc
, vol.121
, pp. 5535-5547
-
-
Petrová, P.1
Koca, J.2
Imberty, A.3
-
45
-
-
0033556236
-
Peptide folding: When simulation meets experiment
-
doi:10.1002/(SICI)1521-3773(19990115)38:1/2
-
Daura X, Gademann K, Jaun B, Seebach D, van Gunsteren WF et al. (1999) Peptide folding: When simulation meets experiment . Angew Chem - Int Ed 38: 236-240. doi:10.1002/(SICI)1521-3773(19990115)38:1/2.
-
(1999)
Angew Chem - Int Ed
, vol.38
, pp. 236-240
-
-
Daura, X.1
Gademann, K.2
Jaun, B.3
Seebach, D.4
Van Gunsteren, W.F.5
-
46
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
doi:10.1002/(SICI)1096-987X(19981115)19:14
-
Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE et al. (1998) Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J Comput Chem 19: 1639-1662. doi:10.1002/(SICI)1096- 987X(19981115)19:14.
-
(1998)
J Comput Chem
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
-
47
-
-
58949085244
-
An efficient one-step site-directed deletion, insertion, single and multiple-site plasmid mutagenesis protocol
-
doi:10.1186/1472-6750-8-91. PubMed: 19055817
-
Liu H, Naismith JH (2008) An efficient one-step site-directed deletion, insertion, single and multiple-site plasmid mutagenesis protocol. BMC Biotechnol 8: 91. doi:10.1186/1472-6750-8-91. PubMed: 19055817.
-
(2008)
BMC Biotechnol
, vol.8
, pp. 91
-
-
Liu, H.1
Naismith, J.H.2
|