메뉴 건너뛰기




Volumn 164, Issue 1, 2014, Pages 24-35

Recovering root system traits using image analysis exemplified by two-dimensional neutron radiography images of lupine

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGICAL MODEL; GROWTH, DEVELOPMENT AND AGING; IMAGE PROCESSING; LUPIN; MAIZE; METHODOLOGY; NEUTRON; PHYSIOLOGY; PLANT ROOT; RADIOGRAPHY; SOIL;

EID: 84891773511     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.113.227892     Document Type: Article
Times cited : (92)

References (40)
  • 1
  • 2
    • 84861479920 scopus 로고    scopus 로고
    • A new tool for analysis of root growth in the spatiotemporal continuum
    • Basu P, Pal A (2012) A new tool for analysis of root growth in the spatiotemporal continuum. New Phytol 195: 264-274
    • (2012) New Phytol , vol.195 , pp. 264-274
    • Basu, P.1    Pal, A.2
  • 5
  • 6
    • 0002990697 scopus 로고
    • ROOTMAP: A model in three-dimensional coordinates of the growth and structure of fibrous root systems
    • Diggle AJ (1988) ROOTMAP: a model in three-dimensional coordinates of the growth and structure of fibrous root systems. Plant Soil 105: 169-178
    • (1988) Plant Soil , vol.105 , pp. 169-178
    • Diggle, A.J.1
  • 8
    • 0023469286 scopus 로고
    • An architectural approach to the comparative ecology of plant root systems
    • Fitter A (1987) An architectural approach to the comparative ecology of plant root systems. New Phytol 106: 61-77
    • (1987) New Phytol , vol.106 , pp. 61-77
    • Fitter, A.1
  • 9
    • 0026301290 scopus 로고
    • Architectural analysis of plant root systems. 1. Architectural correlates of exploitation efficiency
    • Fitter A, Stickland T, Harvey M (1991) Architectural analysis of plant root systems. 1. Architectural correlates of exploitation efficiency. New Phytol 118: 375-382
    • (1991) New Phytol , vol.118 , pp. 375-382
    • Fitter, A.1    Stickland, T.2    Harvey, M.3
  • 11
    • 17644427999 scopus 로고    scopus 로고
    • Methods of scattering corrections for quantitative neutron radiography, nuclear instruments and methods
    • Hassanein R, Lehmann E, Vontobel P (2005) Methods of scattering corrections for quantitative neutron radiography, nuclear instruments and methods. Physics Research A 542: 353-360
    • (2005) Physics Research A , vol.542 , pp. 353-360
    • Hassanein, R.1    Lehmann, E.2    Vontobel, P.3
  • 12
    • 0030613454 scopus 로고    scopus 로고
    • Three dimensional imaging of plant roots in situ with x-ray computed tomography
    • Heeraman D, Hopmans J, Clausnitzer V (1997) Three dimensional imaging of plant roots in situ with x-ray computed tomography. Plant Soil 189: 167-179
    • (1997) Plant Soil , vol.189 , pp. 167-179
    • Heeraman, D.1    Hopmans, J.2    Clausnitzer, V.3
  • 14
    • 84860193453 scopus 로고    scopus 로고
    • Roots: The acquisition of water and nutrients from the heterogeneous soil environment
    • Hodge A (2010) Roots: the acquisition of water and nutrients from the heterogeneous soil environment. Prog Bot 71: 307-337
    • (2010) Prog Bot , vol.71 , pp. 307-337
    • Hodge, A.1
  • 15
    • 0033623974 scopus 로고    scopus 로고
    • Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response
    • Hoover A, Kouznetsova V, Goldbaum M (2000) Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response. IEEE Trans Med Imaging 19: 203-210
    • (2000) IEEE Trans Med Imaging , vol.19 , pp. 203-210
    • Hoover, A.1    Kouznetsova, V.2    Goldbaum, M.3
  • 18
    • 72449174265 scopus 로고    scopus 로고
    • DART: A software to analyse root system architecture and development from captured images
    • Le Bot J, Serra V, Fabre J, Draye X, Adamowicz S, Pagès L (2010) DART: a software to analyse root system architecture and development from captured images. Plant Soil 326: 261-273
    • (2010) Plant Soil , vol.326 , pp. 261-273
    • Le Bot, J.1    Serra, V.2    Fabre, J.3    Draye, X.4    Adamowicz, S.5    Pagès, L.6
  • 19
    • 77953690174 scopus 로고    scopus 로고
    • A dynamic root system growth model based on L-Systems
    • Leitner D, Klepsch S, Bodner G, Schnepf A (2010) A dynamic root system growth model based on L-Systems. Plant Soil 332: 177-192
    • (2010) Plant Soil , vol.332 , pp. 177-192
    • Leitner, D.1    Klepsch, S.2    Bodner, G.3    Schnepf, A.4
  • 20
    • 70350345530 scopus 로고    scopus 로고
    • A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes
    • Lesage D, Angelini ED, Bloch I, Funka-Lea G (2009) A review of 3D vessel lumen segmentation techniques: models, features and extraction schemes. Med Image Anal 13: 819-845
    • (2009) Med Image Anal , vol.13 , pp. 819-845
    • Lesage, D.1    Angelini, E.D.2    Bloch, I.3    Funka-Lea, G.4
  • 21
    • 80052424959 scopus 로고    scopus 로고
    • A novel image-analysis toolbox enabling quantitative analysis of root system architecture
    • Lobet G, Pagès L, Draye X (2011) A novel image-analysis toolbox enabling quantitative analysis of root system architecture. Plant Physiol 157: 29-39
    • (2011) Plant Physiol , vol.157 , pp. 29-39
    • Lobet, G.1    Pagès, L.2    Draye, X.3
  • 22
    • 34547950547 scopus 로고    scopus 로고
    • Turner Review No. 14. Roots of the second green revolution
    • Lynch JP (2007) Turner Review No. 14. Roots of the second green revolution. Aust J Bot 55: 493-512
    • (2007) Aust J Bot , vol.55 , pp. 493-512
    • Lynch, J.P.1
  • 23
    • 84856571108 scopus 로고    scopus 로고
    • RooTrak: Automated recovery of three-dimensional plant root architecture in soil from x-ray microcomputed tomography images using visual tracking
    • Mairhofer S, Zappala S, Tracy SR, Sturrock C, Bennett M, Mooney SJ, Pridmore T (2012) RooTrak: automated recovery of three-dimensional plant root architecture in soil from x-ray microcomputed tomography images using visual tracking. Plant Physiol 158: 561-569
    • (2012) Plant Physiol , vol.158 , pp. 561-569
    • Mairhofer, S.1    Zappala, S.2    Tracy, S.R.3    Sturrock, C.4    Bennett, M.5    Mooney, S.J.6    Pridmore, T.7
  • 24
    • 0037325736 scopus 로고    scopus 로고
    • A linear time algorithm for computing exact Euclidean distance transforms of binary images in arbitrary dimensions
    • Maurer CR, Qi R, Raghavan V (2003) A linear time algorithm for computing exact Euclidean distance transforms of binary images in arbitrary dimensions. IEEE Trans Pattern Anal Mach Intell 25: 265-270
    • (2003) IEEE Trans Pattern Anal Mach Intell , vol.25 , pp. 265-270
    • Maurer, C.R.1    Qi, R.2    Raghavan, V.3
  • 26
    • 84858004392 scopus 로고    scopus 로고
    • Developing x-ray computed tomography to non-invasively image 3-D root systems architecture in soil
    • Mooney S, Pridmore T, Helliwell J, Bennett M (2012) Developing x-ray computed tomography to non-invasively image 3-D root systems architecture in soil. Plant Soil 352: 1-22
    • (2012) Plant Soil , vol.352 , pp. 1-22
    • Mooney, S.1    Pridmore, T.2    Helliwell, J.3    Bennett, M.4
  • 28
    • 79954532603 scopus 로고    scopus 로고
    • High-throughput feature counting and measurement of roots
    • Naeem A, French AP, Wells DM, Pridmore TP (2011) High-throughput feature counting and measurement of roots. Bioinformatics 27: 1337-1338
    • (2011) Bioinformatics , vol.27 , pp. 1337-1338
    • Naeem, A.1    French, A.P.2    Wells, D.M.3    Pridmore, T.P.4
  • 29
    • 84868704489 scopus 로고    scopus 로고
    • Growscreen-rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons
    • Nagel K, Putz A, Gilmer F, Heinz K, Fischbach A, Pfeifer J, Faget M, Blossfeld S, Ernst M, Dimaki C, et al (2012) Growscreen-rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons. Funct Plant Biol 39: 891-904
    • (2012) Funct Plant Biol , vol.39 , pp. 891-904
    • Nagel, K.1    Putz, A.2    Gilmer, F.3    Heinz, K.4    Fischbach, A.5    Pfeifer, J.6    Faget, M.7    Blossfeld, S.8    Ernst, M.9    Dimaki, C.10
  • 30
    • 49949116707 scopus 로고    scopus 로고
    • Quantitative imaging of infiltration, root growth, and root water uptake via neutron radiography
    • Oswald S, Menon M, Carminati A, Vontobel P, Lehmann E, Schulin R (2008) Quantitative imaging of infiltration, root growth, and root water uptake via neutron radiography. Vadose Zone J 7: 1035-1047
    • (2008) Vadose Zone J , vol.7 , pp. 1035-1047
    • Oswald, S.1    Menon, M.2    Carminati, A.3    Vontobel, P.4    Lehmann, E.5    Schulin, R.6
  • 31
    • 0000285728 scopus 로고
    • A simulation model of the threedimensional architecture of the maize root system
    • Pagès L, Jordan M, Picard D (1989) A simulation model of the threedimensional architecture of the maize root system. Plant Soil 119: 147-154
    • (1989) Plant Soil , vol.119 , pp. 147-154
    • Pagès, L.1    Jordan, M.2    Picard, D.3
  • 32
  • 34
    • 0035317113 scopus 로고    scopus 로고
    • A mathematical model of plant nutrient uptake
    • Roose T, Fowler AC, Darrah PR (2001) A mathematical model of plant nutrient uptake. J Math Biol 42: 347-360
    • (2001) J Math Biol , vol.42 , pp. 347-360
    • Roose, T.1    Fowler, A.C.2    Darrah, P.R.3
  • 35
    • 55849113693 scopus 로고    scopus 로고
    • Mathematical models of plant-soil interaction
    • Roose T, Schnepf A (2008) Mathematical models of plant-soil interaction. Philos Trans A Math Phys Eng Sci 366: 4597-4611
    • (2008) Philos Trans A Math Phys Eng Sci , vol.366 , pp. 4597-4611
    • Roose, T.1    Schnepf, A.2
  • 36
    • 84869394341 scopus 로고    scopus 로고
    • Modelling P uptake by a growing and exuding root system
    • Schnepf A, Leitner D, Klepsch S (2012) Modelling P uptake by a growing and exuding root system. Vadose Zone J 11: 3
    • (2012) Vadose Zone J , vol.11 , pp. 3
    • Schnepf, A.1    Leitner, D.2    Klepsch, S.3
  • 37
    • 84859986064 scopus 로고    scopus 로고
    • Root system architecture: Insights from Arabidopsis and cereal crops
    • Smith S, De Smet I (2012) Root system architecture: insights from Arabidopsis and cereal crops. Philos Trans R Soc Lond B Biol Sci 367: 1441-1452
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 1441-1452
    • Smith, S.1    De Smet, I.2
  • 38
    • 84874401380 scopus 로고    scopus 로고
    • In situ root system architecture extraction from magnetic resonance imaging for application to water uptake modeling
    • Stingaciu L, Schulz H, Pohlmeier A, Behnke S, Zilken H, Javaux M, Vereecken H (2013) In situ root system architecture extraction from magnetic resonance imaging for application to water uptake modeling. Vadose Zone J 12: 1
    • (2013) Vadose Zone J , vol.12 , pp. 1
    • Stingaciu, L.1    Schulz, H.2    Pohlmeier, A.3    Behnke, S.4    Zilken, H.5    Javaux, M.6    Vereecken, H.7
  • 39
    • 74249094242 scopus 로고    scopus 로고
    • The X-factor: Visualizing undisturbed root architecture in soils using x-ray computed tomography
    • Tracy SR, Roberts JA, Black CR, McNeill A, Davidson R, Mooney SJ (2010) The X-factor: visualizing undisturbed root architecture in soils using x-ray computed tomography. J Exp Bot 61: 311-313
    • (2010) J Exp Bot , vol.61 , pp. 311-313
    • Tracy, S.R.1    Roberts, J.A.2    Black, C.R.3    McNeill, A.4    Davidson, R.5    Mooney, S.J.6
  • 40
    • 36248989199 scopus 로고    scopus 로고
    • Three-dimensional modeling of hydrotropism effects on plant architecture along a hillslope
    • Tsutsumi D, Kosugi K, Mizuyama T (2004) Three-dimensional modeling of hydrotropism effects on plant architecture along a hillslope. Vadose Zone J 3: 1017-1030
    • (2004) Vadose Zone J , vol.3 , pp. 1017-1030
    • Tsutsumi, D.1    Kosugi, K.2    Mizuyama, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.