메뉴 건너뛰기




Volumn 9, Issue 1, 2014, Pages 146-155

Using Spinach-based sensors for fluorescence imaging of intracellular metabolites and proteins in living bacteria

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CARBON; GLUCOSE; GREEN FLUORESCENT PROTEIN; PROTEIN; RNA;

EID: 84891715447     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2014.001     Document Type: Article
Times cited : (105)

References (20)
  • 1
    • 79960959180 scopus 로고    scopus 로고
    • RNA mimics of green fluorescent protein
    • Paige, J.S., Wu, K.Y. &Jaffrey, S.R. RNA mimics of green fluorescent protein. Science 333, 642-646 (2011)
    • (2011) Science , vol.333 , pp. 642-646
    • Paige, J.S.1    Wu, K.Y.2    Jaffrey, S.R.3
  • 2
    • 84858030373 scopus 로고    scopus 로고
    • Fluorescence imaging of cellular metabolites with RNA
    • Paige, J.S., Nguyen-Duc, T., Song, W. &Jaffrey, S.R. Fluorescence imaging of cellular metabolites with RNA. Science 335, 1194 (2012)
    • Science , vol.335 , pp. 11942012
    • Paige, J.S.1    Nguyen-Duc, T.2    Song, W.3    Jaffrey, S.R.4
  • 3
    • 84883455570 scopus 로고    scopus 로고
    • Imaging bacterial protein expression using genetically encoded RNA sensors
    • Song, W., Strack, R.L. &Jaffrey, S.R. Imaging bacterial protein expression using genetically encoded RNA sensors. Nat. Methods 10, 873-875 (2013)
    • (2013) Nat. Methods , vol.10 , pp. 873-875
    • Song, W.1    Strack, R.L.2    Jaffrey, S.R.3
  • 4
    • 84881219054 scopus 로고    scopus 로고
    • New approaches for sensing metabolites and proteins in live cells using RNA
    • Strack, R.L. &Jaffrey, S.R. New approaches for sensing metabolites and proteins in live cells using RNA. Curr. Opin. Chem. Biol. 17, 651-655 (2013)
    • (2013) Curr. Opin. Chem. Biol , vol.17 , pp. 651-655
    • Strack, R.L.1    Jaffrey, S.R.2
  • 5
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington, A.D. &Szostak, J.W. In vitro selection of RNA molecules that bind specific ligands. Nature 346, 818-822 (1990)
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 6
    • 34548551398 scopus 로고    scopus 로고
    • SELEX-A (r)evolutionary method to generate high-Affinity nucleic acid ligands
    • Stoltenburg, R., Reinemann, C. &Strehlitz, B. SELEX-A (r)evolutionary method to generate high-Affinity nucleic acid ligands. Biomol. Eng. 24, 381-403 (2007)
    • (2007) Biomol. Eng , vol.24 , pp. 381-403
    • Stoltenburg, R.1    Reinemann, C.2    Strehlitz, B.3
  • 8
    • 70349331596 scopus 로고    scopus 로고
    • Genetically encoded biosensors based on engineered fluorescent proteins
    • Frommer, W.B., Davidson, M.W. &Campbell, R.E. Genetically encoded biosensors based on engineered fluorescent proteins. Chem. Soc. Rev. 38, 2833-2841 (2009)
    • (2009) Chem. Soc. Rev , vol.38 , pp. 2833-2841
    • Frommer, W.B.1    Davidson, M.W.2    Campbell, R.E.3
  • 9
    • 75149112222 scopus 로고    scopus 로고
    • Designs and applications of fluorescent protein-based biosensors
    • Ibraheem, A. &Campbell, R.E. Designs and applications of fluorescent protein-based biosensors. Curr. Opin. Chem. Biol. 14, 30-36 (2010)
    • (2010) Curr. Opin. Chem. Biol , vol.14 , pp. 30-36
    • Ibraheem, A.1    Campbell, R.E.2
  • 10
    • 84875784381 scopus 로고    scopus 로고
    • RNA-based fluorescent biosensors for live-cell imaging of second messengers cyclic di-GMP and cyclic AMP-GMP
    • Kellenberger, C.A., Wilson, S.C., Sales-Lee, J. &Hammond, M.C. RNA-based fluorescent biosensors for live-cell imaging of second messengers cyclic di-GMP and cyclic AMP-GMP. J. Am. Chem. Soc. 135, 4906-4909 (2013)
    • (2013) J. Am. Chem. Soc , vol.135 , pp. 4906-4909
    • Kellenberger, C.A.1    Wilson, S.C.2    Sales-Lee, J.3    Hammond, M.C.4
  • 11
    • 84865016402 scopus 로고    scopus 로고
    • Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy
    • Nakayama, S., Luo, Y., Zhou, J., Dayie, T.K. &Sintim, H.O. Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy. Chem. Commun. (Camb) 48, 9059-9061 (2012)
    • (2012) Chem. Commun. (Camb) , vol.48 , pp. 9059-9061
    • Nakayama, S.1    Luo, Y.2    Zhou, J.3    Dayie, T.K.4    Sintim, H.O.5
  • 12
    • 38749142232 scopus 로고    scopus 로고
    • Characterization of nucleotide pools as a function of physiological state in Escherichia coli
    • Buckstein, M.H., He, J. &Rubin, H. Characterization of nucleotide pools as a function of physiological state in Escherichia coli. J. Bacteriol. 190, 718-726 (2008)
    • (2008) J. Bacteriol , vol.190 , pp. 718-726
    • Buckstein, M.H.1    He, J.2    Rubin, H.3
  • 13
    • 0028224199 scopus 로고
    • High-resolution molecular discrimination by RNA
    • Jenison, R.D., Gill, S.C., Pardi, A. &Polisky, B. High-resolution molecular discrimination by RNA. Science 263, 1425-1429 (1994)
    • (1994) Science , vol.263 , pp. 1425-1429
    • Jenison, R.D.1    Gill, S.C.2    Pardi, A.3    Polisky, B.4
  • 14
    • 1942477473 scopus 로고    scopus 로고
    • ADP-specific sensors enable universal assay of protein kinase activity
    • Srinivasan, J. et al. ADP-specific sensors enable universal assay of protein kinase activity. Chem. Biol. 11, 499-508 (2004)
    • (2004) Chem. Biol , vol.11 , pp. 499-508
    • Srinivasan, J.1
  • 15
    • 34547659860 scopus 로고    scopus 로고
    • Recombinant RNA technology: The tRNA scaffold
    • Ponchon, L. &Dardel, F. Recombinant RNA technology: the tRNA scaffold. Nat. Methods 4, 571-576 (2007)
    • (2007) Nat. Methods , vol.4 , pp. 571-576
    • Ponchon, L.1    Dardel, F.2
  • 16
    • 22144466240 scopus 로고    scopus 로고
    • The five-parameter logistic: A characterization and comparison with the four-parameter logistic
    • Gottschalk, P.G. &Dunn, J.R. The five-parameter logistic: a characterization and comparison with the four-parameter logistic. Anal. Biochem. 343, 54-65 (2005)
    • (2005) Anal. Biochem , vol.343 , pp. 54-65
    • Gottschalk, P.G.1    Dunn, J.R.2
  • 17
    • 56249108340 scopus 로고    scopus 로고
    • Measuring calcium dynamics in living cells with genetically encodable calcium indicators
    • McCombs, J.E. &Palmer, A.E. Measuring calcium dynamics in living cells with genetically encodable calcium indicators. Methods 46, 152-159 (2008)
    • (2008) Methods , vol.46 , pp. 152-159
    • McCombs, J.E.1    Palmer, A.E.2
  • 18
    • 0031782955 scopus 로고    scopus 로고
    • Regulation of acetate metabolism by protein phosphorylation in enteric bacteria
    • Cozzone, A.J. Regulation of acetate metabolism by protein phosphorylation in enteric bacteria. Annu. Rev. Microbiol. 52, 127-164 (1998)
    • (1998) Annu. Rev. Microbiol , vol.52 , pp. 127-164
    • Cozzone, A.J.1
  • 19
    • 0023597556 scopus 로고
    • An RNA mutation that increases the affinity of an RNA-protein interaction
    • Lowary, P.T. &Uhlenbeck, O.C. An RNA mutation that increases the affinity of an RNA-protein interaction. Nucleic Acids Res. 15, 10483-10493 (1987)
    • (1987) Nucleic Acids Res , vol.15 , pp. 10483-10493
    • Lowary, P.T.1    Uhlenbeck, O.C.2
  • 20
    • 0015147278 scopus 로고
    • The effect of carbon and nitrogen sources on the level of metabolic intermediates in Escherichia coli
    • Lowry, O.H., Carter, J., Ward, J.B. &Glaser, L. The effect of carbon and nitrogen sources on the level of metabolic intermediates in Escherichia coli. J. Biol. Chem. 246, 6511-6521 (1971)
    • (1971) J. Biol. Chem , vol.246 , pp. 6511-6521
    • Lowry, O.H.1    Carter, J.2    Ward, J.B.3    Glaser, L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.