메뉴 건너뛰기




Volumn 3, Issue MAR, 2012, Pages

Adenosine methylation in Arabidopsis mRNA is associated with the 3′ end and reduced levels cause developmental defects

Author keywords

IME4; METTL3; mRNA methylation; MT A70; Post transcriptional

Indexed keywords


EID: 84891485596     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2012.00048     Document Type: Article
Times cited : (227)

References (37)
  • 1
    • 0016793057 scopus 로고
    • Modified nucleosides and bizzar 5′-termini in mouse myeloma messenger-RNA
    • Adams, J. M., and Cory, S. (1975). Modified nucleosides and bizzar 5′-termini in mouse myeloma messenger-RNA. Nature 255, 28-33.
    • (1975) Nature , vol.255 , pp. 28-33
    • Adams, J.M.1    Cory, S.2
  • 2
    • 0018715582 scopus 로고
    • Methylation of nuclear simian virus-40 RNAs
    • Aloni, Y., Dhar, R., and Khoury, G. (1979). Methylation of nuclear simian virus-40 RNAs. J. Virol. 32, 52-60.
    • (1979) J. Virol. , vol.32 , pp. 52-60
    • Aloni, Y.1    Dhar, R.2    Khoury, G.3
  • 3
    • 0017622044 scopus 로고
    • Localization of N6-methyladenosine in Rous-sarcoma virus genome
    • Beemon, K., and Keith, J. (1977). Localization of N6-methyladenosine in Rous-sarcoma virus genome. J. Mol. Biol.113, 165-179.
    • (1977) J. Mol. Biol. , vol.113 , pp. 165-179
    • Beemon, K.1    Keith, J.2
  • 4
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., and Hochberg, Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. Ser. A 57, 289-300.
    • (1995) J. R. Stat. Soc. Ser. A , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 5
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate in multiple testing under dependency
    • Benjamini, Y., and Yekutieli, D. (2001). The control of the false discovery rate in multiple testing under dependency. Ann. Statist. 29, 1165-1188.
    • (2001) Ann. Statist. , vol.29 , pp. 1165-1188
    • Benjamini, Y.1    Yekutieli, D.2
  • 7
    • 0030712151 scopus 로고    scopus 로고
    • Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase
    • Bokar, J. A., Shambaugh, M. E., Polayes, D., Matera, A. G., and Rottman, F. M. (1997). Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase. RNA 3, 1233-1247.
    • (1997) RNA , vol.3 , pp. 1233-1247
    • Bokar, J.A.1    Shambaugh, M.E.2    Polayes, D.3    Matera, A.G.4    Rottman, F.M.5
  • 8
    • 0036788427 scopus 로고    scopus 로고
    • Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA: M(6)A methyltransferase
    • Bujnicki, J. M., Feder, M., Radlinska, M., and Blumenthal, R. M. (2002). Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA:m(6)A methyltransferase. J. Mol. Evol. 55, 431-444.
    • (2002) J. Mol. Evol. , vol.55 , pp. 431-444
    • Bujnicki, J.M.1    Feder, M.2    Radlinska, M.3    Blumenthal, R.M.4
  • 9
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by acid guanidinium thiocyanate phenol chloroform extraction
    • Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidinium thiocyanate phenol chloroform extraction. Anal. Biochem. 162, 156-159.
    • (1987) Anal. Biochem. , vol.162 , pp. 156-159
    • Chomczynski, P.1    Sacchi, N.2
  • 10
    • 0037109157 scopus 로고    scopus 로고
    • Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: A potential mechanism for the activity of the IME4 gene
    • Clancy, M. J., Shambaugh, M. E., Timpte, C. S., and Bokar, J. A. (2002). Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: a potential mechanism for the activity of the IME4 gene. Nucleic Acids Res. 30, 4509-4518.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4509-4518
    • Clancy, M.J.1    Shambaugh, M.E.2    Timpte, C.S.3    Bokar, J.A.4
  • 11
    • 0025245501 scopus 로고
    • Sequence specificity of mRNA N6-adenosine methyltransferase
    • Csepany, T., Lint, A., Baldick, C. J. Jr., and Beemon, K. (1990). Sequence specificity of mRNA N6-adenosine methyltransferase. J. Biol. Chem. 265, 20117-20122.
    • (1990) J. Biol. Chem. , vol.265 , pp. 20117-20122
    • Csepany, T.1    Lint, A.2    Baldick Jr., C.J.3    Beemon, K.4
  • 12
    • 0034879697 scopus 로고    scopus 로고
    • Partial complementation of embryo defective mutations: A general strategy to elucidate gene function
    • Despres, B., Delseny, M., and Devic, M. (2001). Partial complementation of embryo defective mutations: a general strategy to elucidate gene function. Plant J. 27, 149-159.
    • (2001) Plant J. , vol.27 , pp. 149-159
    • Despres, B.1    Delseny, M.2    Devic, M.3
  • 13
    • 0016285746 scopus 로고
    • Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells
    • Desrosiers, R., Friderici, K., and Rottman, F. (1974). Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells. Proc. Natl. Acad. Sci. U.S.A. 71, 3971-3975.
    • (1974) Proc. Natl. Acad. Sci. U.S.A. , vol.71 , pp. 3971-3975
    • Desrosiers, R.1    Friderici, K.2    Rottman, F.3
  • 14
    • 0025084945 scopus 로고
    • Sequence specificity of the human mRNA N6-adenosine methylase in vitro
    • Harper, J. E., Miceli, S. M., Roberts, R. J., and Manley, J. L. (1990). Sequence specificity of the human mRNA N6-adenosine methylase in vitro. Nucleic Acids Res. 18, 5735-5741.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5735-5741
    • Harper, J.E.1    Miceli, S.M.2    Roberts, R.J.3    Manley, J.L.4
  • 15
    • 55549092781 scopus 로고    scopus 로고
    • Distinct roles for Khd1p in localization and expression of bud-localized mRNAs in yeast
    • Hasegawa, Y., Irie, K., and Gerber, A. P. (2009). Distinct roles for Khd1p in localization and expression of bud-localized mRNAs in yeast. RNA 14, 2333-2347.
    • (2009) RNA , vol.14 , pp. 2333-2347
    • Hasegawa, Y.1    Irie, K.2    Gerber, A.P.3
  • 16
    • 0018979884 scopus 로고
    • Post-transcriptional modifications of oat coleoptile ribonucleic acids. 5′-Terminal capping and methylation of internal nucleosides in poly(A)-rich RNA
    • Haugland, R. A., and Cline, M. G. (1980). Post-transcriptional modifications of oat coleoptile ribonucleic acids. 5′-Terminal capping and methylation of internal nucleosides in poly(A)-rich RNA. Eur. J. Biochem. 104, 271-277.
    • (1980) Eur. J. Biochem. , vol.104 , pp. 271-277
    • Haugland, R.A.1    Cline, M.G.2
  • 17
    • 80052601644 scopus 로고    scopus 로고
    • Drosophila inducer of Meiosis 4 (IME4) is required for Notch signalling during oogenesis
    • Hongay, C. F., and Orr-Weaver, T. L. (2011). Drosophila inducer of Meiosis 4 (IME4) is required for Notch signalling during oogenesis. Proc. Natl. Acad. Sci. U.S.A. 108, 14855-14860.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 14855-14860
    • Hongay, C.F.1    Orr-Weaver, T.L.2
  • 19
    • 0027954561 scopus 로고
    • Genetic dissection of trichome cell development in Arabidopsis
    • Hülskamp, M., Misera, S., and Jurgens, G. (1994). Genetic dissection of trichome cell development in Arabidopsis. Cell 76, 555-566.
    • (1994) Cell , vol.76 , pp. 555-566
    • Hülskamp, M.1    Misera, S.2    Jurgens, G.3
  • 23
    • 0021890204 scopus 로고
    • Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: Implications for RNA processing
    • Kane, S. E., and Beemon, K. (1985). Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing. Mol. Cell. Biol. 5, 2298-2306.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 2298-2306
    • Kane, S.E.1    Beemon, K.2
  • 24
    • 0018485931 scopus 로고
    • Wheat embryo ribonucleates. XIII. Methyl-substituted nucleoside constituents and 5′-terminal dinucleotide sequences in bulk poly(AR)-rich RNA from imbibing wheat embryos
    • Kennedy, T. D., and Lane, B. G. (1979). Wheat embryo ribonucleates. XIII. Methyl-substituted nucleoside constituents and 5′-terminal dinucleotide sequences in bulk poly(AR)-rich RNA from imbibing wheat embryos. Can. J. Biochem. 57, 927-931.
    • (1979) Can. J. Biochem. , vol.57 , pp. 927-931
    • Kennedy, T.D.1    Lane, B.G.2
  • 25
    • 0017876593 scopus 로고
    • 5′-Terminal structures of poly(A)+ cytoplasmic messenger RNA and of poly(A)+and poly(A)-heterogeneous nuclear RNA of cells of the dipteran Drosophila melanogaster
    • Levis, R., and Penman, S. (1978). 5′-Terminal structures of poly(A)+ cytoplasmic messenger RNA and of poly(A)+and poly(A)-heterogeneous nuclear RNA of cells of the dipteran Drosophila melanogaster. J. Mol. Biol. 120, 487-515.
    • (1978) J. Mol. Biol. , vol.120 , pp. 487-515
    • Levis, R.1    Penman, S.2
  • 26
    • 0008114581 scopus 로고
    • N6-methyladenosine in maize poly(A)-containing RNA
    • Nichols, J. L. (1979). N6-methyladenosine in maize poly(A)-containing RNA. Plant Sci. Lett. 15, 357-361.
    • (1979) Plant Sci. Lett. , vol.15 , pp. 357-361
    • Nichols, J.L.1
  • 27
    • 0001914649 scopus 로고
    • Nucleotides adjacent to N6-methyladenosine in maize poly(A)-containing RNA
    • Nichols, J. L., and Welder, L. (1981). Nucleotides adjacent to N6-methyladenosine in maize poly(A)-containing RNA. Plant Sci. Lett. 21, 75-81.
    • (1981) Plant Sci. Lett. , vol.21 , pp. 75-81
    • Nichols, J.L.1    Welder, L.2
  • 28
    • 0016809932 scopus 로고
    • Methylated constituents of L cell messenger-RNA-evidence for an unusual cluster at 5′ terminus
    • Perry, R. P., Kelley, D. E., Friderici, K., and Rottman, F. (1975). Methylated constituents of L cell messenger-RNA-evidence for an unusual cluster at 5′ terminus. Cell 4, 387-394.
    • (1975) Cell , vol.4 , pp. 387-394
    • Perry, R.P.1    Kelley, D.E.2    Friderici, K.3    Rottman, F.4
  • 29
    • 0025047077 scopus 로고
    • Analysis and in vitro localization of internal methylated adenine residues in dihydrofolate reductase mRNA
    • Rana, A. P., and Tuck, M. T. (1990). Analysis and in vitro localization of internal methylated adenine residues in dihydrofolate reductase mRNA. Nucleic Acids Res. 18, 4803-4808.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 4803-4808
    • Rana, A.P.1    Tuck, M.T.2
  • 30
    • 0032912592 scopus 로고    scopus 로고
    • The abscisic acid-insensitive gene ABI3 is expressed during vegetative quiescence processes in Arabidopsis
    • Rhode, A., Van Montagu, M., and Boerjan, W. (1999). The abscisic acid-insensitive gene ABI3 is expressed during vegetative quiescence processes in Arabidopsis. Plant Cell Environ. 22, 261-270.
    • (1999) Plant Cell Environ. , vol.22 , pp. 261-270
    • Rhode, A.1    Van Montagu, M.2    Boerjan, W.3
  • 32
    • 0017708804 scopus 로고
    • Comparison of methylated sequences in messenger RNA and heterogeneous nuclear RNA from mouse L cells
    • Schibler, U., Kelley, D. E., and Perry, R. P. (1977). Comparison of methylated sequences in messenger RNA and heterogeneous nuclear RNA from mouse L cells. J. Mol. Biol. 115, 695-714.
    • (1977) J. Mol. Biol. , vol.115 , pp. 695-714
    • Schibler, U.1    Kelley, D.E.2    Perry, R.P.3
  • 33
    • 0029061729 scopus 로고
    • Accurate and efficient N-6-adenosine methylation in spliceosomal U6 small nuclear RNA by HeLa cell extract in vitro
    • Shimba, S., Bokar, J. A., Rottman, F., and Reddy, R. (1995). Accurate and efficient N-6-adenosine methylation in spliceosomal U6 small nuclear RNA by HeLa cell extract in vitro. Nucleic Acids Res. 23, 2421-2426.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 2421-2426
    • Shimba, S.1    Bokar, J.A.2    Rottman, F.3    Reddy, R.4
  • 34
    • 0032872977 scopus 로고    scopus 로고
    • Inhibition of 6-methyladenine formation decreases the translation efficiency of dihydrofolate reductase transcripts
    • Tuck, M. T., Wiehl, P. E., and Pan, T. (1999). Inhibition of 6-methyladenine formation decreases the translation efficiency of dihydrofolate reductase transcripts. Int. J. Biochem. Cell Biol. 31, 837-851.
    • (1999) Int. J. Biochem. Cell Biol. , vol.31 , pp. 837-851
    • Tuck, M.T.1    Wiehl, P.E.2    Pan, T.3
  • 35
    • 1942437673 scopus 로고    scopus 로고
    • The immunophilin-interacting protein AtFIP37 from Arabidopsis is essential for plant development and is involved in trichome endoreduplication
    • Vespa, L., Vachon, G., Berger, F., Perazza, D., Faure, J. D., and Herzog, M. (2004). The immunophilin-interacting protein AtFIP37 from Arabidopsis is essential for plant development and is involved in trichome endoreduplication. Plant Physiol. 134, 1283-1292.
    • (2004) Plant Physiol. , vol.134 , pp. 1283-1292
    • Vespa, L.1    Vachon, G.2    Berger, F.3    Perazza, D.4    Faure, J.D.5    Herzog, M.6
  • 36
    • 0017296194 scopus 로고
    • 5′-Terminal and internal methylated nucleotide sequences in HeLa cell messenger-RNA
    • Wei, C. M., Gershowitz, A., and Moss, B. (1976). 5′-Terminal and internal methylated nucleotide sequences in HeLa cell messenger-RNA. Biochemistry, 15, 397-401.
    • (1976) Biochemistry , vol.15 , pp. 397-401
    • Wei, C.M.1    Gershowitz, A.2    Moss, B.3
  • 37
    • 57749089784 scopus 로고    scopus 로고
    • MTA is an Arabidopsismessenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor
    • Zhong, S., Li, H., Bodi, Z., Button, J. D., Vespa, L., Herzog, M., and Fray, R. G. (2008). MTA is an Arabidopsismessenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor. Plant Cell 20, 1278-1288.
    • (2008) Plant Cell , vol.20 , pp. 1278-1288
    • Zhong, S.1    Li, H.2    Bodi, Z.3    Button, J.D.4    Vespa, L.5    Herzog, M.6    Fray, R.G.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.