Building science gateways with enginframe: A life science example

CEUR Workshop Proceedings

Volumn 513, Issue , 2009, Pages

  Torterolo, Livia ^a,b   Porro, Ivan ^a,b   Fato, Marco ^b   Melato, Maurizio ^c   Calanducci, Antonio ^d   Barbera, Roberto ^d,e  

^a Nextage Srl   (Italy)

^b UNIVERSITY OF GENOA   (Italy)

^c NICE srl   (Italy)

^d INFN SEZIONE DI CATANIA   (Italy)

^e UNIVERSITY OF CATANIA   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

BUILDING SCIENCE; COMMON INTERFACES; COMPUTATIONAL ENVIRONMENTS; CYBER INFRASTRUCTURES; E-INFRASTRUCTURES; SCIENCE GATEWAY; VIRTUAL ORGANISATIONS; WEB SERVICE INTERFACE;

VIRTUAL REALITY;

EID: 84891402323     PISSN: 16130073     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (20)

1. Yang, X., Dove, M.T., Hayes, M., Calleja, M., He, L., Murray-Rust, P. (2006) Survey of Major Tools and Technologies for Grid-enabled Portal Development, Proceedings of the UK e-Science All Hands Meeting 2006.
2. Gentzsch, W., (2009) Grid and Cloud Portals for Design, Simulation, and Collaboration, Parallel, Distributed and Grid Computing for Engineering, Saxe- Coburg Publications, pp. 83-10.
3. Menday, R., Hagemeier, B., Schuller, B., Snelling, D., van den Berghe, S., Cacciari, C., Melato, M. (2007) A One-Stop, Fire-and-(almost)Forget, Droppingoff and Rendezvous Point. Springer, 2007.Lecture Notes in Computer Science;4375), doi: 10.1007/978-3-540-72337-0-22.
4. Lederer, H. and Alessandrini, V. (2008) DEISA: Enabling Cooperative Extreme Computing in Europe, Parallel Computing: Architectures, Algorithms and Applications. Volume 15 Advances in Parallel Computing; eds. C. Bischof et al. (ISBN: 978-1-58603-796-3), IOS press, p. 689.
5. Andronico, G., Ardizzone, V., Barbera, R., Catania, R., Carrieri, A., Falzone, A., Giorgio, E., La Rocca, G., Monforte, S., Pappalardo, M., Passaro, G., Platania, G. (2005) GILDA: The Grid INFN Virtual Laboratory for Dissemination Activities, TRIDENTCOM 2005: 304-305.
6. Kacsuk, P. and Sipos, G., (2005) Multi-Grid, Multi-User Workflows in the PGRADE Portal Journal of Grid Computing, Vol. 3, No. 3-4, Springer Publishers, pp. 221-238.
7. Novotny, J., Russell, M., and Wehrens, O. (2004) GridSphere: An advanced portal framework. Euromicro Conference, 412-419.
8. Scardaci, D., Scuderi, G., (2007) Managing Confidential Data in the gLite Middleware, Enabling Technologies, IEEE International Workshops on, pp. 298-299, 16th IEEE International Workshops on Enabling Technologies: Infrastructure for Collaborative Enterprises (WETICE 2007).
9. Torterolo, L., Porro, I., Venuti, N., Gatti, S., Calanducci, A., Scifo, S., and Fato, M. (2007) BMPortal: A Bio Medical Informatics Framework EGEE User Forum 2007, Manchester, UK, 176.
10. Zhu, B., Marciano, R., and Moore, R., (2009) Enabling Inter-repository Access Management between iRODS and Fedora". Accepted by the 4th International Conference on Open Repositories. Atlanta, Georgia, USA. May 18-21.
11. Beltrame F, Maggi P, Melato M, Molinari E, Sisto R, and Torterolo L. (2006) SRB Data Grid and Computer Grid Integration via the EnginFrame Grid Portal, SRB Workshop San Diego Supercomputing Center.
12. Scifo, S. (2007) GSAF Grid Storage Access Framework. Enabling Technologies: Infrastructure for Collaborative Enterprises, 296-297.
13. Torterolo, L., Corradi, L., Canesi, B., Fato, M., Barbera, R., Scifo, S., Calanducci, A., Scardaci, D., Parisi, S., and Scuderi, G. (2008) A new paradigm to design, implement and deply Grid oriented application: A biomedical use case". Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare.
14. Calanducci, A., Castrillo, F.P., Pollàn, R.R., del Solar, (2008) Enabling Digital Repositories on the Grid, Advanced Engineering Computing and Applications in Sciences, International Conference on, pp. 45-50.
15. Clementi, L., Cacciari, C., Melato, M., Menday, R., Hagemeier, B., (2007) A Business-Oriented Grid Workflow Management System Proceedings of 3rd UNICORE Summit 2007, Springer, LNCS 4854, pp.131-140.
16. Glatard, T., Montagnat, J., Lingrand, D., and Pennac, X. (2007) Flexible and efficient workflow deployment of data-intensive applications on grids with MOTEUR, International Journal of High Performance Computing and Applications.
17. Oinn, T. and et al.(2000) Taverna: Lessons in creating a workflow environment0 for the life sciences, Concurrency Computat: Pract Exper, 1-36.
18. Corradi, L., Fato, M., Porro, I., Scaglione, S., and Torterolo, L. (2008) A Webbased and Grid-enabled dChip version for the analysis of large sets of gene expression data. BMC Bioinformatics, 9:480.
19. Gentleman, R, Carey, J. V., Huber, W., Irizarry, A.R, and Dudoit, S. (2005) Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Statistics for Biology and Health, Springer.
20. Kaplan, E and Meier, P. (1958) Nonparametric estimation from incomplete observations. J Am Stat Assoc, 53:457-481.