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Volumn 30, Issue 1, 2014, Pages 38-39

A poor man's blastx-High-throughput metagenomic protein database search using pauda

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; AMINO ACID SEQUENCE; DNA SEQUENCE; METAGENOMICS; NUCLEOTIDE SEQUENCE; PROCEDURES; PROTEIN DATABASE; SOFTWARE; ARTICLE; COMPUTER PROGRAM; METHODOLOGY;

EID: 84891349082     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btt254     Document Type: Article
Times cited : (47)

References (8)
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    • Kanehisa, M.1    Goto, S.2
  • 5
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie2
    • Langmead, B. and Salzberg, S. (2012) Fast gapped-read alignment with Bowtie2. Nat. Methods, 9, 357-359.
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  • 6
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    • Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
    • Mackelprang, R. et al. (2011) Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw. Nature, 480, 368-371.
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    • MacKelprang, R.1
  • 7
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    • Comparison of multiple metagenomes using phylogenetic networks based on ecological indices
    • Mitra, S. et al. (2010) Comparison of multiple metagenomes using phylogenetic networks based on ecological indices. ISME J., 4, 1236-1242.
    • (2010) ISME J. , vol.4 , pp. 1236-1242
    • Mitra, S.1
  • 8
    • 84855167751 scopus 로고    scopus 로고
    • RAPSearch2: A fast and memory-efficient protein similarity search tool for next-generation sequencing data
    • Zhao, Y. et al. (2012) RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data. Bioinformatics, 28, 125-126.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.