-
1
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
May
-
Ashburner, M., Ball, C.A., Blake, J.A., Botstein, D., Butler, H., Cherry, J.M., Davis, A.P., Dolinski, K., Dwight, S.S., Eppig, J.T., Harris, M.A., Hill, D.P., Issel-Tarver, L., Kasarskis, A., Lewis, S., Matese, J.C., Richardson, J.E., Ringwald, M., Rubin, G.M., Sherlock, G.: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics 25(1), 25-9 (May 2000)
-
(2000)
The Gene Ontology Consortium. Nature Genetics
, vol.25
, Issue.1
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
2
-
-
47249146126
-
Drug target identification using side-effect similarity
-
Jul
-
Campillos, M., Kuhn, M., Gavin, A.C., Jensen, L.J., Bork, P.: Drug target identification using side-effect similarity. Science (New York, N.Y.) 321(5886), 263-266 (Jul 2008)
-
(2008)
Science (New York, N.Y.)
, vol.321
, Issue.5886
, pp. 263-266
-
-
Campillos, M.1
Kuhn, M.2
Gavin, A.C.3
Jensen, L.J.4
Bork, P.5
-
3
-
-
77956229224
-
Evolutionary characters, phenotypes and ontologies: Curating data from the systematic biology literature
-
May
-
Dahdul, W.M., Balhoff, J.P., Engeman, J., Grande, T., Hilton, E.J., Kothari, C., Lapp, H., Lundberg, J.G., Midford, P.E., Vision, T.J., Westerfield, M., Mabee, P.M.: Evolutionary Characters, Phenotypes and Ontologies: Curating Data from the Systematic Biology Literature. PLoS ONE 5(5), e10708 (May 2010)
-
(2010)
PLoS ONE
, vol.5
, Issue.5
-
-
Dahdul, W.M.1
Balhoff, J.P.2
Engeman, J.3
Grande, T.4
Hilton, E.J.5
Kothari, C.6
Lapp, H.7
Lundberg, J.G.8
Midford, P.E.9
Vision, T.J.10
Westerfield, M.11
Mabee, P.M.12
-
4
-
-
78049446066
-
Semantic similarity for automatic classification of chemical compounds
-
Sep
-
Ferreira, J.a.D., Couto, F.M.: Semantic Similarity for Automatic Classification of Chemical Compounds. PLoS Computational Biology 6(9), e1000937 (Sep 2010)
-
(2010)
PLoS Computational Biology
, vol.6
, Issue.9
-
-
Ferreira, J.A.D.1
Couto, F.M.2
-
5
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Jan
-
Huang, D.W., Sherman, B.T., Lempicki, R.A.: Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Research 37(1), 1-13 (Jan 2009)
-
(2009)
Nucleic Acids Research
, vol.37
, Issue.1
, pp. 1-13
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
6
-
-
77952898461
-
Ontologies in quantitative biology: A basis for comparison, integration, and discovery
-
May
-
Jensen, L.J., Bork, P.: Ontologies in quantitative biology: a basis for comparison, integration, and discovery. PLoS Biology 8(5), e1000374 (May 2010)
-
(2010)
PLoS Biology
, vol.8
, Issue.5
-
-
Jensen, L.J.1
Bork, P.2
-
7
-
-
75549085494
-
Gene expression atlas at the European bioinformatics institute
-
Jan
-
Kapushesky, M., Emam, I., Holloway, E., Kurnosov, P., Zorin, A., Malone, J., Rustici, G., Williams, E., Parkinson, H., Brazma, A.: Gene expression atlas at the European bioinformatics institute. Nucleic Acids Research 38(Database issue), D690-8 (Jan 2010)
-
(2010)
Nucleic Acids Research
, vol.38
, Issue.DATABASE ISSUE
-
-
Kapushesky, M.1
Emam, I.2
Holloway, E.3
Kurnosov, P.4
Zorin, A.5
Malone, J.6
Rustici, G.7
Williams, E.8
Parkinson, H.9
Brazma, A.10
-
8
-
-
34250625734
-
Phenotype ontologies: The bridge between genomics and evolution
-
Jul
-
Mabee, P.M., Ashburner, M., Cronk, Q., Gkoutos, G.V., Haendel, M., Segerdell, E., Mungall, C., Westerfield, M.: Phenotype ontologies: the bridge between genomics and evolution. Trends in Ecology & Evolution 22(7), 345-50 (Jul 2007)
-
(2007)
Trends in Ecology & Evolution
, vol.22
, Issue.7
, pp. 345-350
-
-
Mabee, P.M.1
Ashburner, M.2
Cronk, Q.3
Gkoutos, G.V.4
Haendel, M.5
Segerdell, E.6
Mungall, C.7
Westerfield, M.8
-
9
-
-
78651273718
-
Cross-product extensions of the gene ontology
-
Feb
-
Mungall, C.J., Bada, M., Berardini, T.Z., Deegan, J., Ireland, A., Harris, M.A., Hill, D.P., Lomax, J.: Cross-product extensions of the Gene Ontology. Journal of Biomedical Informatics (Feb 2010)
-
(2010)
Journal of Biomedical Informatics
-
-
Mungall, C.J.1
Bada, M.2
Berardini, T.Z.3
Deegan, J.4
Ireland, A.5
Harris, M.A.6
Hill, D.P.7
Lomax, J.8
-
10
-
-
77349112447
-
Integrating phenotype ontologies across multiple species
-
Jan
-
Mungall, C.J., Gkoutos, G.V., Smith, C.L., Haendel, M.A., Lewis, S.E., Ashburner, M.: Integrating phenotype ontologies across multiple species. Genome Biology 11(1), R2 (Jan 2010)
-
(2010)
Genome Biology
, vol.11
, Issue.1
-
-
Mungall, C.J.1
Gkoutos, G.V.2
Smith, C.L.3
Haendel, M.A.4
Lewis, S.E.5
Ashburner, M.6
-
11
-
-
67849128700
-
BioPortal: Ontologies and integrated data resources at the click of a mouse
-
Jul WEB SERVER ISSUE
-
Noy, N.F., Shah, N.H., Whetzel, P.L., Dai, B., Dorf, M., Griffith, N., Jonquet, C., Rubin, D.L., Storey, M.A., Chute, C.G., Musen, M.A.: BioPortal: ontologies and integrated data resources at the click of a mouse. Nucleic Acids Research 37(Web Server issue), W170-3 (Jul 2009)
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Noy, N.F.1
Shah, N.H.2
Whetzel, P.L.3
Dai, B.4
Dorf, M.5
Griffith, N.6
Jonquet, C.7
Rubin, D.L.8
Storey, M.A.9
Chute, C.G.10
Musen, M.A.11
-
12
-
-
68249087607
-
Semantic similarity in biomedical ontologies
-
Jul
-
Pesquita, C., Faria, D., Falcão, A.O., Lord, P., Couto, F.M.: Semantic similarity in biomedical ontologies. PLoS Computational Biology 5(7), e1000443 (Jul 2009)
-
(2009)
PLoS Computational Biology
, vol.5
, Issue.7
-
-
Pesquita, C.1
Faria, D.2
Falcão, A.O.3
Lord, P.4
Couto, F.M.5
-
14
-
-
63049123830
-
Ontology-driven indexing of public datasets for translational bioinformatics
-
Jan
-
Shah, N.H., Jonquet, C., Chiang, A.P., Butte, A.J., Chen, R., Musen, M.a.: Ontology-driven indexing of public datasets for translational bioinformatics. BMC Bioinformatics 10 Suppl 2, S1 (Jan 2009)
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.SUPPL. 2
-
-
Shah, N.H.1
Jonquet, C.2
Chiang, A.P.3
Butte, A.J.4
Chen, R.5
Musen, M.A.6
-
15
-
-
35948989284
-
The OBO Foundry: Coordinated evolution of ontologies to support biomedical data integration
-
Nov
-
Smith, B., Ashburner, M., Rosse, C., Bard, J., Bug, W., Ceusters, W., Goldberg, L., Eilbeck, K., Ireland, A., Mungall, C., Leontis, N., Rocca-Serra, P., Ruttenberg, A., Sansone, S.A., Scheuermann, R., Shah, N., Whetzel, P., Lewis, S.: The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nature Biotechnology 25(11), 1251-1255 (Nov 2007)
-
(2007)
Nature Biotechnology
, vol.25
, Issue.11
, pp. 1251-1255
-
-
Smith, B.1
Ashburner, M.2
Rosse, C.3
Bard, J.4
Bug, W.5
Ceusters, W.6
Goldberg, L.7
Eilbeck, K.8
Ireland, A.9
Mungall, C.10
Leontis, N.11
Rocca-Serra, P.12
Ruttenberg, A.13
Sansone, S.A.14
Scheuermann, R.15
Shah, N.16
Whetzel, P.17
Lewis, S.18
-
16
-
-
72949116593
-
Linking human diseases to animal models using ontology-based phenotype annotation
-
Nov
-
Washington, N.L., Haendel, M.A., Mungall, C.J., Ashburner, M., Westerfield, M., Lewis, S.E.: Linking human diseases to animal models using ontology-based phenotype annotation. PLoS Biology 7(11), e1000247 (Nov 2009)
-
(2009)
PLoS Biology
, vol.7
, Issue.11
-
-
Washington, N.L.1
Haendel, M.A.2
Mungall, C.J.3
Ashburner, M.4
Westerfield, M.5
Lewis, S.E.6
|