Genetic networks involved in poplar root response to low nitrogen

Plant Signaling and Behavior

Volumn 8, Issue 11, 2013, Pages

  Wei, Hairong ^a   Yordanov, Yordan ^a   Kumari, Sapna ^a   Georgieva, Tatyana ^a   Busov, Victor ^a  

^a MICHIGAN TECHNOLOGICAL UNIVERSITY   (United States)

Author keywords

Biological processes; Low nitrogen; Root specific growth; Signal transduction; Transcription factors

Indexed keywords

NITROGEN;

DRUG EFFECTS; GENE REGULATORY NETWORK; GENETICS; GROWTH, DEVELOPMENT AND AGING; PLANT ROOT; POPULUS; SIGNAL TRANSDUCTION;

GENE REGULATORY NETWORKS; NITROGEN; PLANT ROOTS; POPULUS; SIGNAL TRANSDUCTION;

EID: 84890920646     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.27211     Document Type: Article

References (11)

1. Wei H, Yordanov YS, Georgieva T, Li X, Busov V. Nitrogen deprivation promotes Populus root growth through global transcriptome reprogramming and activation of hierarchical genetic networks. New Phytol 2013; 200:483-97; PMID:23795675; http:// dx.doi.org/10.1111/nph.12375
2. Lu S, Li Q, Wei H, Chang MJ, Tunlaya-Anukit S, Kim H, Liu J, Song J, Sun YH, Yuan L, et al. Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa. Proc Natl Acad Sci U S A 2013; 110:10848-53; PMID:23754401; http:// dx.doi.org/10.1073/pnas.1308936110
3. Vidal EA, Moyano TC, Riveras E, Contreras-López O, Gutiérrez RA. Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots. Proc Natl Acad Sci U S A 2013; 110:12840-5; PMID:23847199; http://dx.doi.org/10.1073/pnas.1310937110
4. Bennett T, van den Toorn A, Sanchez-Perez GF, Campilho A, Willemsen V, Snel B, Scheres B. SOMBRERO, BEARSKIN1, and BEARSKIN2 regulate root cap maturation in Arabidopsis. Plant Cell 2010; 22:640-54; PMID:20197506; http://dx.doi. org/10.1105/tpc.109.072272
5. Willemsen V, Bauch M, Bennett T, Campilho A, Wolkenfelt H, Xu J, Haseloff J, Scheres B. The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells. Dev Cell 2008; 15:913-22; PMID:19081078; http://dx.doi.org/10.1016/j. devcel.2008.09.019
6. Koizumi K, Gallagher KL. Identification of SHRUBBY, a SHORT-ROOT and SCARECROW interacting protein that controls root growth and radial patterning. Development 2013; 140:1292-300; PMID:23444357; http://dx.doi.org/10.1242/ dev.090761
7. Pauluzzi G, Divol F, Puig J, Guiderdoni E, Dievart A, Périn C. Surfing along the root ground tissue gene network. Dev Biol 2012; 365:14-22; PMID:22349629; http://dx.doi.org/10.1016/j.ydbio.2012.02.007
8. Ogasawara H, Kaimi R, Colasanti J, Kozaki A. Activity of transcription factor JACKDAW is essential for SHR/ SCR-dependent activation of SCARECROW and MAGPIE and is modulated by reciprocal interactions with MAGPIE, SCARECROW and SHORT ROOT. Plant Mol Biol 2011; 77:489-99; PMID:21935722; http://dx.doi.org/10.1007/s11103-011-9826-5
9. Menand B, Yi K, Jouannic S, Hoffmann L, Ryan E, Linstead P, Schaefer DG, Dolan L. An ancient mechanism controls the development of cells with a rooting function in land plants. Science 2007; 316:1477-80; PMID:17556585; http://dx.doi. org/10.1126/science.1142618
10. Jang G, Yi K, Pires ND, Menand B, Dolan L. RSL genes are sufficient for rhizoid system development in early diverging land plants. Development 2011; 138:2273-81; PMID:21558375; http://dx.doi. org/10.1242/dev.060582
11. Masucci JD, Schiefelbein JW. The rhd6 Mutation of Arabidopsis thaliana Alters Root-Hair Initiation through an Auxin-and Ethylene-Associated Process. Plant Physiol 1994; 106:1335-46; PMID:12232412