Poplar woody root proteome during the transition dormancy-active growth

Plant Biosystems

Volumn 147, Issue 4, 2013, Pages 1095-1100

  Trupiano, D ^a   Rocco, M ^b   Renzone, G ^c   Scaloni, A ^c   Montagnoli, A ^d   Terzaghi, M ^d   Di Iorio, A ^d   Chiatante, D ^d   Scippa, G S ^a  

^a UNIVERSITY OF MOLISE   (Italy)

^b UNIVERSITY OF SANNIO   (Italy)

^c CNR   (Italy)

^d UNIVERSITY OF INSUBRIA   (Italy)

Author keywords

Active growth dormancy cycle; growth seasonal changes; Populus nigra; root proteome; woody root

Indexed keywords

POPULUS; POPULUS NIGRA;

EID: 84890805311     PISSN: 11263504     EISSN: 17245575     Source Type: Journal    
DOI: 10.1080/11263504.2013.860053     Document Type: Article

References (64)

1. AbbasiMK, SharifS, KazmiM, SultanT, AslamM. 2011. Isolation of plant growth promoting rhizobacteria from wheat rhizosphere and their effect on improving growth, yield and nutrient uptake of plants. Plant Biosyst145: 159-168.
2. AhnCS, LeeJH, HwangAR, KimWT, PaiHS. 2006. Prohibitin is involved in mitochondrial biogenesis in plants. Plant J46: 658-667.
3. AroraR, RowlandLJ, TaninoK. 2003. Induction and release of bud dormancy in woody perennials: A science comes of age. HortScience38: 911-921.
4. BabaK, KarlbergA, SchmidtJ, SchraderJ, HvidstenTR, BakoL, BhaleraoRP. 2011. Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen. Proc Natl Acad Sci USA108: 3418-3423.
5. BevanM, BancroftI, BentE, LoveK, GoodmanH, DeanC, et al. 1998. Analysis of 1.9 Mb contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature391: 485-488.
6. BonadeiM, ZelascoS, GiorcelliA, GennaroM, CalligariP, QuattriniE, et al. 2012. Transgene stability and agronomical performance of two transgenic Basta (R)-tolerant lines of Populusalba L. Plant Biosyst146(1): 33-40.
7. CampoyaJA, RuizD, EgeaJ. 2011. Seasonal progression of bud dormancy in apricot (Prunus armeniaca L.) in a Mediterranean climate: A single-node cutting approach. Plant Biosyst145: 596-605.
8. ChiatanteD, Di IorioA, ScippaGS. 2005. Root responses of Quercus ilex L. seedlings to drought and fire. Plant Biosyst139: 198-208.
9. ChristiansMJ, LarsenPB. 2007. Mutational loss of the prohibitin AtPHB3 results in an extreme constitutive ethylene response phenotype coupled with partial loss of ethylene-inducible gene expression in Arabidopsis seedlings. J Exp Bot58: 2237-2248.
10. ClausenS, ApelK. 1991. Seasonal changes in the concentration of the major storage protein and its mRNA in xylem ray cells of poplar trees. Plant Mol Biol17: 669-678.
11. DassoM. 2001. Running on Ran: Nuclear transport and the mitotic spindle. Cell104: 321-324.
12. DelgadoJA, González-GarridoL, MartínezT. 2012. How deep must we dig? Sampling depth effects on root biomass assessments in Mediterranean riparian buffers. Plant Biosyst146(2): 413-418.
13. DesotgiuR, CascioC, PollastriniM, GerosaG, MarzuoliR, BussottiF. 2012. Short and long term photosynthetic adjustments in sun and shade leaves of Fagus sylvatica L. investigated by fluorescence transient (FT) analysis. Plant Biosyst146: 206-216.
14. DruartN, JohanssonA, BabaK, SchraderJ, SjodinA, BhaleraoRR, et al. 2007. Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks. Plant J50: 557-573.
15. DurandTC, BaillifP, AlbericP, CarpinS, LabelP, HausmanJF, MorabitoD. 2011. Cadmium and Zinc are differentially distributed in Populus tremula × P. alba exposed to metal excess. Plant Biosyst145(2): 397-405.
16. ErmelFF, Follet-GueyeM, CibertC, VianB, MorvanC, CatessonA, GoldbergR. 2000. Differential localization of arabinan and galactan side-chains of rhamnogalacturonan I in cambial derivatives. Planta210: 732-740.
17. Follet-GueyeML, ErmelFF, VianB, CatessonAM, GoldbergR. 2000. Pectin remodelling during cambial derivative differentiation. In: SavidgeR, BarnettJR, NapierR, editors. Cell and molecular biology of wood formation. Oxford: BIOS Scientific. pp. 289-294.
18. FurukawaJ, KanazawaM, SatohS. 2011. Dormancy-induced temporal up-regulation of root activity in calcium translocation to shoot in Populus maximowiczii. Plant Root6: 10-18.
19. GillS, TutejaN. 2010. Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Plant Physiol Biochem48: 909-930.
20. GomezL, FaurobertM. 2002. Contribution of vegetative storage proteins to seasonal nitrogen variations in the young shoots of peach trees (Prunus persica L. Batsch). J Exp Bot53: 2431-2439.
21. HaninM, BriniF, FbelC, TodaY, TakedaS, MasmoudiK. 2011. Plant dehydrins and stress tolerance: Versatile proteins for complex mechanisms. Plant Sign Behav6: 1503-1505.
22. IaliciccoM, ViscosiV, ArenaS, ScaloniA, TrupianoD, RoccoM, et al. 2012. Lens culinaris Medik. seed proteome: Analysis to identify specific markers. Plant Sci197: 1-9.
23. JanssonS, BhaleraoRP, GrooverAT. 2010. Genetics and genomics of populus. Series: Plant genetics and genomics: Crops and models. Vol. 8. New York: Springer. p. 368.
24. KaplanF, GuyCL. 2004. β-Amylase induction and the protective role of maltose during temperature shock. Plant Physiol135: 1674-1684.
25. LevyA, EpelBL. 2009. Cytology of the (1,3)-β-glucan (callose) in plasmodesmata and sieve plate pores. In: BacicA, FincherGB, StoneBA, editors. Chemistry, biochemistry, and biology of (1,3)-β-glucans and related polysaccharides. Burlington, MA: Elsevier. pp. 439-463.
26. LongF, SunbHL, LiabSC. 2011. Influence of rocky slope gradient on root anchorage of Vitex negundo L. Plant Biosyst145.
27. LoveJ, BjorklundS, VahalaJ, HertzbergM, KangasjarviJ, SundbergB. 2009. Ethylene is an endogenous stimulator of cell division in the cambial meristem of Populus. Proc Natl Acad Sci USA106: 5984-5989.
28. Massengo-TiasséRP, CronanJE. 2009. Diversity in enoyl-acyl carrier protein reductases. Cell Mol Life Sci66: 1507-1517.
29. MazzitelliL, HancockRD, HauptS, WalkerPG, PontSDA, McNicolJ, et al. 2007. Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds. J Exp Bot58: 1035-1045.
30. MihrC, BraunHP. 2003. Proteomics in plant biology. In: ConnP, editor. Handbook of proteomics. Totowa, NJ: Humana Press. pp. 409-416.
31. MiyazakiJH, YangSF. 1987. The methionine salvage pathway in relation to ethylene and polyamine biosynthesis. Physiol Plantarum69(2): 366-370.
32. MontagnoliA, TerzaghiM, Di IorioA, ScippaGS, ChiatanteD. 2012a. Fine-root seasonal pattern, production and turnover rate of European beech (Fagus sylvatica L.) stands in Italy Prealps: Possible implications of coppice conversion to high forest. Plant Biosyst146: 1012-1022.
33. MontagnoliA, TerzaghiM, Di IorioA, ScippaGS, ChiatanteD. 2012b. Fine-root morphological and growth traits in a Turkey-oak stand in relation to seasonal changes in soil moisture in the Southern Apennines, Italy. Ecol Res27: 1015-1025.
34. NegiS, IvanchenkoMG, MudayGK. 2008. Ethylene regulates lateral root formation and auxin transport in Arabidopsis thaliana. Plant J55: 175-187.
35. NeriD, LeeON, SaviniG, KurokuraT, SugiyamaN. 2011. Lateral root formation in the strawberry Fragaria × ananassa Duch. revealed by histone H4 in situ hybridization. Plant Biosyst145(2): 406-410.
36. OwLF, SimEK. 2012. Detection of urban tree roots with the ground penetrating radar. Plant Biosyst146: 288-297.
37. Palove-BalangP, MistrikI. 2011. Title: Effect of aluminium on nitrogen assimilation in roots of Lotus japonicus. Plant Biosyst145: 527-531.
38. PapadakisA, Roubelakis-AngelakisK. 2005. Polyamines inhibit NADPH oxidase-mediated superoxide generation and putrescine prevents programmed cell death induced by polyamine oxidase-generated hydrogen peroxide. Planta220: 826-837.
39. ParkS, KeathleyDE, HanKH. 2008. Transcriptional profiles of the annual growth cycle in Populus deltoides. Tree Physiol28: 321-329.
40. PrassinosC, RigasaS, KizisaD, VlahoubA, HatzopoulosaP. 2011. Subtle proteome differences identified between post-dormant vegetative and floral peach buds. J Proteomics74: 607-619.
41. RewaldB, LeuschneraC, WiesmanbZ, EphrathcJE. 2011. Influence of salinity on root hydraulic properties of three olive varieties. Plant Biosyst145(1): 12-22.
42. RinnePLH, WellingA, VahalaJ, RipelL, RuonalaR, KangasjarviJ, van der SchootC. 2011. Chilling of dormant buds hyperinduces FLOWERING LOCUS T and recruits GA-inducible 1,3-beta-glucanases to reopen signal conduits and release dormancy in Populus. Plant Cell23: 130-146.
43. RohdeA, BhaleraoRP. 2007. Plant dormancy in the perennial context. Trends Plant Sci12: 217-223.
44. RuonalaR, RinnePLH, KangasjarviJ, van der SchootC. 2008. CENL1 expression in the rib meristem affects stem elongation and the transition to dormancy in Populus. Plant Cell20: 59-74.
45. RuttinkT, ArendM, MorreelK, StormeV, RombautsS, FrommJ, et al. 2007. A molecular timetable for apical bud formation and dormancy induction in poplar. Plant Cell19: 2370-2390.
46. SchraderJ, MoyleR, BhaleraoR, HertzbergM, LundebergJ, NilssonP, BhaleraoRP. 2004. Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome. Plant J40: 173-187.
47. ScippaGS, TrupianoD, RoccoM, Di IorioA, ChiatanteD. 2008. Unravelling the response of poplar (Populus nigra) roots to mechanical stress imposed by bending. Plant Biosyst142: 401-413.
48. TerzoliS, BeritognoloI, GiovannelliA, BenelliC, MigliaccioF, PiconeseS, et al. 2011. Expression of Aux/IAA genes during development of sylleptic and proleptic buds in white poplar. Plant Biosyst145(2): 370-380.
49. TrupianoD, Di IorioA, MontagnoliA, LasserreB, RoccoM, GrossoA, et al. 2012b. Involvement of lignin and hormones in the response of woody poplar taproots to mechanical stress. Physiol Plantarum146(1): 39-52.
50. TrupianoD, RenzoniG, RoccoM, ScaloniA, ViscosiV, ChiatanteD, ScippaGS. 2012a. The proteome of Populus nigra woody root: Response to bending. Ann Bot110(2): 415-432.
51. TrupianoD, RoccoM, ScaloniA, RenzoniG, RossiM, ViscosiV, et al. 2013b. Temporal analysis of poplar woody root response to bending stress. Physiol Plantarum. 10.1111/ppl.12072.
52. TrupianoD, YordanovY, ReganS, MeilanR, TschaplinskiT, ScippaGS, BusovV. 2013a. Identification, characterization of genes affecting adventitious root formation in Populus via activation tagging. Planta238(2): 271-282.
53. TuskanGA, DifazioS, JanssonS, BohlmannJ, GrigorievI, HellstenU, et al. 2006. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science313: 1596-1604.
54. UemuraM, SteponkusPL. 1999. Cold acclimation in plants: Relationship between lipid composition and the cryostability of the plasma membrane. J Plant Res112: 245-254.
55. Van AkenO, PecenkovaT, Van De CotteB, De RyckeR, EeckhoutD, FrommH, et al. 2007. Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development. Plant J52: 850-864.
56. Van AkenO, WhelanJ, Van BreusegemF. 2010. Prohibitins: Mitochondrial partners in development and stress response. Trends Plant Sci15: 275-282.
57. VermaP, MathurAK, ShankerK. 2012. Growth, alkaloid production, rol genes integration, bioreactor up-scaling and plant regeneration studies in hairy root lines of Catharanthus roseus. Plant Biosyst146: 27-40.
58. VitaleL, ArenaC, Virzo De SantoA. 2012. Seasonal changes in photosynthetic activity and photochemical efficiency of the Mediterranean shrub Phillyrea angustifolia L. Plant Biosyst146(2): 443-450.
59. WangWX, PelahD, AlergandT, ShoseyovO, AltmanA. 2002. Characterization of SP1, a stress-responsive, boiling-soluble, homo-oligomeric protein from aspen. Plant Physiol130: 865-875.
60. WellingA, MoritzT, PalvaET, JunttilaO. 2002. Independent activation of cold acclimation by low temperature and short photoperiod in hybrid aspen. Plant Physiol129: 1633-1641.
61. WetzelS, DemmersC, GreenwoodJS. 1989. Seasonally fluctuating bark proteins are a potential form of nitrogen storage in three temperate hardwoods. Planta178: 275-281.
62. YakovlevIA, AsanteDKA, FossdalCG, PartanenJ, JunttilaO, JohnsenO. 2008. Dehydrins expression related to timing of bud burst in Norway spruce. Planta228: 459-472.
63. ZhangJ, LiuH, ZhaoQ-Z, DuYX, ChangQX, LuQL. 2011. Effects of ATP production on silicon uptake by roots of rice seedlings. Plant Biosyst145: 866-872.
64. ZhangY, XuehongM, ZhichunZ. 2012. The influence of light conditions and interspecific competition on the root foraging traits and seedling growth of two tree species. Plant Biosyst146(1): 7-14.