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Volumn 12, Issue 4, 2013, Pages 617-629

Modeling membrane systems using colored stochastic Petri nets

Author keywords

Colored stochastic Petri nets; Dynamic color sets; Stochastic membrane systems with active membranes; Virus infection

Indexed keywords

ACTIVE MEMBRANES; COLOR SETS; COLORED PETRI NETS; COMPUTATIONAL MODEL; DYNAMIC BEHAVIORS; MODEL MEMBRANE SYSTEMS; STOCHASTIC PETRI NETS; VIRUS INFECTION;

EID: 84890562030     PISSN: 15677818     EISSN: 15729796     Source Type: Journal    
DOI: 10.1007/s11047-013-9367-8     Document Type: Article
Times cited : (21)

References (23)
  • 1
    • 85036473162 scopus 로고    scopus 로고
    • Flattening the transition P systems with dissolution
    • Springer
    • Agrigoroaiei O, Ciobanu G (2010) Flattening the transition P systems with dissolution. LNCS, vol 6501. Springer, pp 53-64
    • (2010) LNCS , vol.6501 , pp. 53-64
    • Agrigoroaiei, O.1    Ciobanu, G.2
  • 3
    • 38549104046 scopus 로고    scopus 로고
    • A hybrid approach to modelling biological systems
    • Springer
    • Bernardini F, Gheorghe M, Romero-Campero FJ, Walkinshaw N (2007b) A hybrid approach to modelling biological systems. LNCS, vol 4860. Springer, pp 138-159
    • (2007) LNCS , vol.4860 , pp. 138-159
    • Bernardini, F.1    Gheorghe, M.2    Romero-Campero, F.J.3    Walkinshaw, N.4
  • 6
    • 77955924746 scopus 로고    scopus 로고
    • Deterministic and stochastic P systems for modelling cellular processes
    • 2658266 10.1007/s11047-009-9158-4
    • Gheorghe M, Manca V, Romero-Campero FJ (2010) Deterministic and stochastic P systems for modelling cellular processes. Nat Comput 9(2):457-473
    • (2010) Nat Comput , vol.9 , Issue.2 , pp. 457-473
    • Gheorghe, M.1    Manca, V.2    Romero-Campero, F.J.3
  • 7
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • 10.1021/j100540a008
    • Gillespie DT (1977) Exact stochastic simulation of coupled chemical reactions. J Phys Chem 81(25):2340-2361
    • (1977) J Phys Chem , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.T.1
  • 10
    • 70450204413 scopus 로고    scopus 로고
    • Extended stochastic Petri nets for model-based design of wetlab experiments
    • 10.1007/978-3-642-04186-0-7
    • Heiner M, Lehrack S, Gilbert D, Marwan W (2009) Extended stochastic Petri nets for model-based design of wetlab experiments. Trans Comput Syst Biol XI LNBI 5750:138-163
    • (2009) Trans Comput Syst Biol XI, LNBI , vol.5750 , pp. 138-163
    • Heiner, M.1    Lehrack, S.2    Gilbert, D.3    Marwan, W.4
  • 11
    • 0000098171 scopus 로고
    • Coloured Petri nets and the invariant-method
    • 619005 10.1016/0304-3975(81)90049-9
    • Jensen K (1981) Coloured Petri nets and the invariant-method. Theoret Comput Sci 14(3):317-336
    • (1981) Theoret Comput Sci , vol.14 , Issue.3 , pp. 317-336
    • Jensen, K.1
  • 12
    • 34249933531 scopus 로고    scopus 로고
    • Coloured Petri nets and CPN tools for modelling and validation of concurrent systems
    • 10.1007/s10009-007-0038-x
    • Jensen K, Kristensen LM, Wells LM (2007) Coloured Petri nets and CPN tools for modelling and validation of concurrent systems. Int J Softw Tools Technol Transf 9(3/4):213-254
    • (2007) Int J Softw Tools Technol Transf , vol.9 , Issue.34 , pp. 213-254
    • Jensen, K.1    Kristensen, L.M.2    Wells, L.M.3
  • 13
    • 76849089106 scopus 로고    scopus 로고
    • A Petri net model for membrane systems with dynamic structure
    • 2602207 10.1007/s11047-008-9101-0
    • Kleijn J, Koutny M (2009) A Petri net model for membrane systems with dynamic structure. Nat Comput 8(4):781-796
    • (2009) Nat Comput , vol.8 , Issue.4 , pp. 781-796
    • Kleijn, J.1    Koutny, M.2
  • 15
    • 84862493851 scopus 로고    scopus 로고
    • PhD thesis, Department of Computer Science, Brandenburg University of Technology Cottbus
    • Liu F (2012) Colored Petri nets for systems biology. PhD thesis, Department of Computer Science, Brandenburg University of Technology Cottbus
    • (2012) Colored Petri Nets for Systems Biology
    • Liu, F.1
  • 17
    • 84862491494 scopus 로고    scopus 로고
    • Manual for colored Petri nets in Snoopy
    • Brandenburg University of Technology Cottbus
    • Liu F, Heiner M, Rohr C (2012) Manual for colored Petri nets in Snoopy. Technical report, 02-12, Department of Computer Science, Brandenburg University of Technology Cottbus. http://www-dssz.informatik.tu-cottbus.de/publications/ btu-reports/Manual-for-colored-Petri
    • (2012) Technical Report, 02-12, Department of Computer Science
    • Liu, F.1    Heiner, M.2    Rohr, C.3
  • 18
    • 0034248380 scopus 로고    scopus 로고
    • Computing with membranes
    • 10.1006/jcss.1999.1693
    • Pǎun G (2000) Computing with membranes. J Comput Syst Sci 61:108-143
    • (2000) J Comput Syst Sci , vol.61 , pp. 108-143
    • Pǎun, G.1
  • 22
    • 77951956151 scopus 로고    scopus 로고
    • Snoopy - A unifying Petri net framework to investigate biomolecular networks
    • 10.1093/bioinformatics/btq050
    • Rohr C, Marwan W, Heiner M (2010) Snoopy - a unifying Petri net framework to investigate biomolecular networks. Bioinformatics 26(7):974-975
    • (2010) Bioinformatics , vol.26 , Issue.7 , pp. 974-975
    • Rohr, C.1    Marwan, W.2    Heiner, M.3
  • 23
    • 38949179852 scopus 로고    scopus 로고
    • Stochastic P systems and the simulation of biochemical processes with dynamic compartments
    • 10.1016/j.biosystems.2006.12.009
    • Spicher A, Michel O, Cieslak M, Giavitto J, Prusinkiewicz P (2008) Stochastic P systems and the simulation of biochemical processes with dynamic compartments. BioSystems 91(3):458-472
    • (2008) BioSystems , vol.91 , Issue.3 , pp. 458-472
    • Spicher, A.1    Michel, O.2    Cieslak, M.3    Giavitto, J.4    Prusinkiewicz, P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.