A weighted and directed interareal connectivity matrix for macaque cerebral cortex

Cerebral Cortex

Volumn 24, Issue 1, 2014, Pages 17-36

  Markov, N T ^a,b,c   Ercsey Ravasz, M M ^d,g   Ribeiro Gomes, A R ^a,b   Lamy, C ^a,b   Magrou, L ^a,b   Vezoli, J ^a,b,h   Misery, P ^a,b   Falchier, A ^a,b,i   Quilodran, R ^a,b,j   Gariel, M A ^a,b,k   Sallet, J ^a,b,l   Gamanut, R ^a,b   Huissoud, C ^a,b,m   Clavagnier, S ^a,b,n   Giroud, P ^a,b,o   Sappey Marinier, D ^e   Barone, P ^a,b   Dehay, C ^a,b   Toroczkai, Z ^d   Knoblauch, K ^a,b   Van Essen, D C ^f   Kennedy, H ^a,b   more..

^a STEM CELL AND BRAIN RESEARCH INSTITUTE   (France)

^b UNIVERSITÉ LYON 1   (France)

^c YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF NOTRE DAME   (United States)

^e HÔPITAL NEUROLOGIQUE   (France)

^f WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^g BABE BOLYAI UNIVERSITY   (Romania)

^h ERNST STRÜNGMANN INSTITUTE ESI FOR NEUROSCIENCE IN COOPERATION WITH MAX PLANCK SOCIETY   (Germany)

ⁱ NATHAN S KLINE INSTITUTE FOR PSYCHIATRIC RESEARCH   (United States)

^j UNIVERSIDAD DE VALPARAÍSO   (Chile)

^k NETHERLANDS INSTITUTE FOR NEUROSCIENCE   (Netherlands)

^l UNIVERSITY OF OXFORD   (United Kingdom)

^m HOSPICES CIVILS DE LYON   (France)

ⁿ MCGILL UNIVERSITY   (Canada)

^o Brain and Cognition Research Center in Toulouse   (France)

more..

Author keywords

Connection; Cortex; Graph; Monkey; Network

Indexed keywords

ANIMAL TISSUE; ARTICLE; BRAIN CORTEX; BRAIN MAPPING; BRAIN WEIGHT; CELL LABELING; CONTROLLED STUDY; DENSITY; HUMAN; INJECTION SITE; MACACA; MACACA FASCICULARIS; MOTOR CORTEX; NERVE CELL; NEUROIMAGING; NONHUMAN; PRIORITY JOURNAL; RHESUS MONKEY; STRENGTH; WHITE MATTER; BRAIN CONNECTIVITY; BRAIN FUNCTION; DISPERSION; GRAY MATTER; INSULA; LIMBIC CORTEX; PARIETAL CORTEX; PREFRONTAL CORTEX; TEMPORAL CORTEX;

CONNECTION; CORTEX; GRAPH; MONKEY; NETWORK;

ANIMALS; BRAIN MAPPING; CEREBRAL CORTEX; DIFFUSION MAGNETIC RESONANCE IMAGING; IMAGE PROCESSING, COMPUTER-ASSISTED; MACACA FASCICULARIS; MACACA MULATTA; MODELS, NEUROLOGICAL; NEURAL PATHWAYS; NEUROIMAGING; NEURONAL TRACT-TRACERS;

EID: 84890545141     PISSN: 10473211     EISSN: 14602199     Source Type: Journal    
DOI: 10.1093/cercor/bhs270     Document Type: Article

References (114)

1. Adachi Y, Osada T, Sporns O, Watanabe T, Matsui T, Miyamoto K, Miyashita Y. 2012. Functional connectivity between anatomically unconnected areas is shaped by collective network-level effects in the macaque cortex. Cereb Cortex. 22:1586-1592
2. Aflalo TN, Graziano MS. 2011. Organization of the macaque extrastriate visual cortex re-examined using the principle of spatial continuity of function. J Neurophysiol. 105:305-320
3. Barabasi AL, Albert R. 1999. Emergence of scaling in random networks. Science. 286:509-512
4. Barbas H, Hilgetag CC, Saha S, Dermon CR, Suski JL. 2005. Parallel organization of contralateral and ipsilateral prefrontal cortical projections in the rhesus monkey. BMC Neurosci. 6:32
5. Barbas H, Pandya DN. 1987. Architecture and frontal cortical connections of the premotor cortex (area 6) in the rhesus monkey. J Comp Neurol. 256:211-228
6. Barbas H, Pandya DN. 1989. Architecture and intrinsic connections of the prefrontal cortex in the rhesus monkey. J Comp Neurol. 286:353-375
7. Barbas H, Rempel-Clower N. 1997. Cortical structure predicts the pattern of corticocortical connections. Cereb Cortex. 7:635-646
8. Barone P, Batardiere A, Knoblauch K, Kennedy H. 2000. Laminar distribution of neurons in extrastriate areas projecting to visual areas V1 and V4 correlates with the hierarchical rank and indicates the operation of a distance rule. J Neurosci. 20:3263-3281
9. Batardiere A, Barone P, Dehay C, Kennedy H. 1998. Area-specific laminar distribution of cortical feedback neurons projecting to cat area 17: Quantitative analysis in the adult and during ontogeny. J Comp Neurol. 396:493-510
10. Behrens TE, Sporns O. 2012. Human connectomics. Curr Opin Neurobiol. 22:144-153
11. Boccaletti S, Latora V, Moreno Y, Chavez M, Hwang DU. 2006. Complex networks: Structure and dynamics. Phys Rep. 424:175-308
12. Bohland JW, Wu C, Barbas H, Bokil H, Bota M, Breiter HC, Cline HT, Doyle JC, Freed PJ, Greenspan RJ et al. 2009. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput Biol. 5:e1000334
13. Boussaoud D, Desimone R, Ungerleider LG. 1991. Visual topography of area TEO in the macaque. J Comp Neurol. 306:554-575
14. Boussaoud D, Ungerleider LG, Desimone R. 1990. Pathways for motion analysis: Cortical connections of the medial superior temporal and fundus of the superior temporal visual areas in the macaque. J Comp Neurol. 296:462-495
15. Braitenberg V, Schüz A. 1998. Cortex: Statistics and geometry of neuronal connectivity. Berlin, Heidelberg, New York: Springer-Verlag
16. Bressler SL, Menon V. 2010. Large-scale brain networks in cognition: Emerging methods and principles. Trends Cogn Sci. 14:277-290
17. Bretz F, Hothorn T, Westfall P. 2010. Multiple comparisons using R. Boca Raton: CRC Press
18. Bullmore E, Sporns O. 2009. Complex brain networks: Graph theoretical analysis of structural and functional systems. Nat Rev Neurosci. 10:186-198
19. Burman KJ, Reser DH, Yu HH, Rosa MG. 2011. Cortical Input to the frontal pole of the marmoset monkey. Cereb Cortex. 21:1712-1737
20. Caminiti R, Genovesio A, Marconi B, Mayer AB, Onorati P, Ferraina S, Mitsuda T, Giannetti S, Squatrito S, Maioli MG et al. 1999. Early coding of reaching: Frontal and parietal association connections of parieto-occipital cortex. Eur J Neurosci. 11:3339-3345
21. Chen ZJ, He Y, Rosa-Neto P, Germann J, Evans AC. 2008. Revealing modular architecture of human brain structural networks by using cortical thickness from MRI. Cereb Cortex. 18:2374-2381
22. Cipolloni PB, Pandya DN. 1999. Cortical connections of the frontoparietal opercular areas in the rhesus monkey. J Comp Neurol. 403:431-458
23. Clavagnier S, Falchier A, Kennedy H. 2004. Long-Distance feedback projections to area V1: Implications for multimodal integration, spatial awarness and visual consciousness. Cogn Affect Behav Neurosci. 4:117-126
24. da Costa NM, Martin KA. 2011. How thalamus connects to spiny stellate cells in the cat's visual cortex. J Neurosci. 31:2925-2937
25. Dum RP, Strick PL. 1991. The origin of corticospinal projections from the premotor areas in the frontal lobe. J Neurosci. 11:667-689
26. Ekstrom LB, Roelfsema PR, Arsenault JT, Bonmassar G, Vanduffel W. 2008. Bottom-up depenDent gating of frontal signals in early visual cortex. Science. 321:414-417
27. Falchier A, Clavagnier S, Barone P, Kennedy H. 2002. Anatomical eviDence of multimodal integration in primate striate cortex. J Neurosci. 22:5749-5759
28. Felleman DJ, Burkhalter A, Van Essen DC. 1997. Cortical connections of areas V3 and VP of macaque monkey extrastriate visual cortex. J Comp Neurol. 379:21-47
29. Felleman DJ, Van Essen DC. 1991. Distributed hierarchical processing in the primate cerebral cortex. Cereb Cortex. 1:1-47
30. Friston K. 2010. The free-energy principle: A unified brain theory? Nat Rev Neurosci. 11:127-138
31. Gattass R, Nascimento-Silva S, Soares JG, Lima B, Jansen AK, Diogo AC, Farias MF, Botelho MM, Mariani OS, Azzi J et al. 2005. Cortical visual areas in monkeys: Location, topography, connections, columns, plasticity and cortical dynamics. Philos Trans R Soc Lond B Biol Sci. 360:709-731
32. Ghosh S, Gattera R. 1995. A comparison of the ipsilateral cortical projections to the dorsal and ventral subdivisions of the macaque premotor cortex. Somatosens Mot Res. 12:359-378
33. Godschalk M, Mitz AR, van Duin B, van der Burg H. 1995. Somatotopy of monkey premotor cortex examined with microstimulation. Neurosci Res. 23:269-279
34. Gong G, He Y, Concha L, Lebel C, Gross DW, Evans AC, Beaulieu C. 2009. Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography. Cereb Cortex. 19:524-536
35. Goodhill GJ, Simmen MW, Willshaw DJ. 1995. An evaluation of the use of multidimensional scaling for understanding brain connectivity. Philos Trans R Soc Lond B Biol Sci. 348:265-280
36. Graziano MS, Aflalo TN. 2007. Rethinking cortical organization: Moving away from discrete areas arranged in hierarchies. Neuroscientist. 13:138-147
37. Hagmann P, Cammoun L, Gigandet X, Meuli R, Honey CJ, Wedeen VJ, Sporns O. 2008. Mapping the structural core of human cerebral cortex. PLoS Biol. 6:e159
38. He SQ, Dum RP, Strick PL. 1993. Topographic organization of corticospinal projections from the frontal lobe: Motor areas on the lateral surface of the hemisphere. J Neurosci. 13:952-980
39. He Y, Chen ZJ, Evans AC. 2007. Small-world anatomical networks in the human brain revealed by cortical thickness from MRI. Cereb Cortex. 17:2407-2419
40. Honey CJ, Kotter R, Breakspear M, Sporns O. 2007. Network structure of cerebral cortex shapes functional connectivity on multiple time scales. Proc Natl Acad Sci USA. 104:10240-10245
41. Honey CJ, Sporns O, Cammoun L, Gigandet X, Thiran JP, Meuli R, Hagmann P. 2009. Predicting human resting-state functional connectivity from structural connectivity. Proc Natl Acad Sci USA. 106:2035-2040
42. Iturria-Medina Y, Sotero RC, Canales-Rodriguez EJ, Aleman-Gomez Y, Melie-Garcia L. 2008. Studying the human brain anatomical network via diffusion-weighted MRI and Graph Theory. Neuroimage. 40:1064-1076
43. Janson S, Luczak T, Rucinski A. 2000. Random graphs. New York: Wiley-Interscience
44. Jbabdi S, Johansen-Berg H. 2011. Tractography-where do we go from here? Brain Connectivity. 1:169-183
45. Johnson PB, Ferraina S. 1996. Cortical networks for visual reaching: Intrinsic frontal lobe connectivity. Eur J Neurosci. 8:1358-1362
46. Johnson PB, Ferraina S, Bianchi L, Caminiti R. 1996. Cortical networks for visual reaching: Physiological and anatomical organization of frontal and parietal lobe arm regions. Cereb Cortex. 6:102-119
47. Jones DK. 2010. Challenges and limitations of quantifying brain connectivity in vivo with diffusion MRI. Imaging Med. 2:341-355
48. Jones EG, Coulter JD, Hendry SH. 1978. Intracortical connectivity of architectonic fields in the somatic sensory, motor and parietal cortex of monkeys. J Comp Neurol. 181:291-347
49. Jouve B, Rosenstiehl P, Imbert M. 1998. A mathematical approach to the connectivity between the cortical visual areas of the macaque monkey. Cereb Cortex. 8:28-39
50. Kaas JH, Collins CE. 2001. The organization of sensory cortex. Curr Opin Neurobiol. 11:498-504
51. Kennedy H, Bullier J. 1985. A double-labeling investigation of the afferent connectivity to cortical areas V1 and V2 of the macaque monkey. J Neurosci. 5:2815-2830
52. Knock SA, McIntosh AR, Sporns O, Kotter R, Hagmann P, Jirsa VK. 2009. The effects of physiologically plausible connectivity structure on local and global dynamics in large scale brain models. J Neurosci Methods. 183:86-94
53. Koch C. 2004. The quest for consciousness: A neurobiological approach. Englewood, CO: Roberts and Company
54. Kotter R. 2004. Online retrieval, processing, and visualization of primate connectivity data from the CoCoMac database. Neuroinformatics. 2:127-144
55. Kulli VR, Sigarkanti SC. 1991. Inverse domination in graphs. Nat Acad Sci Lett. 14:473-475
56. LeVay S, Sherk H. 1983. Retrograde transport of [3H]proline: A widespread phenomenon in the central nervous system. Brain Res. 271:131-134
57. Lewis JW, Van Essen DC. 2000. Corticocortical connections of visual, sensorimotor, and multimodal processing areas in the parietal lobe of the macaque monkey. J Comp Neurol. 428:112-137
58. Li Y, Liu Y, Li J, Qin W, Li K, Yu C, Jiang T. 2009. Brain anatomical network and intelligence. PLoS Comput Biol. 5:e1000395
59. Luppino G, Calzavara R, Rozzi S, Matelli M. 2001. Projections from the superior temporal sulcus to the agranular frontal cortex in the macaque. Eur J Neurosci. 14:1035-1040
60. Luppino G, Rozzi S, Calzavara R, Matelli M. 2003. Prefrontal and agranular cingulate projections to the dorsal premotor areas F2 and F7 in the macaque monkey. Eur J Neurosci. 17:559-578
61. Marconi B, Genovesio A, Battaglia-Mayer A, Ferraina S, Squatrito S, Molinari M, Lacquaniti F, Caminiti R. 2001. Eye-hand coordination during reaching. I. Anatomical relationships between parietal and frontal cortex. Cereb Cortex. 11:513-527
62. Markov NT, Misery P, Falchier A, Lamy C, Vezoli J, Quilodran R, Gariel MA, Giroud P, Ercsey-Ravasz M, Pilaz LJ et al. 2011. Weight consistency specifies regularities of macaque cortical networks. Cereb Cortex. 21:1254-1272
63. Matelli M, Govoni P, Galletti C, Kutz DF, Luppino G. 1998. Superior area 6 afferents from the superior parietal lobule in the macaque monkey. J Comp Neurol. 402:327-352
64. Morecraft RJ, Stilwell-Morecraft KS, Cipolloni PB, Ge J, McNeal DW, Pandya DN. 2012. Cytoarchitecture and cortical connections of the anterior cingulate and adjacent somatomotor fields in the rhesus monkey. Brain Res Bull. 87:457-497
65. Mountcastle VB. 1997. The columnar organization of the neocortex. Brain. 120:701-722
66. Newman MEJ. 2010. Networks: An introduction. New York: Oxford University Press
67. Newman MEJ. 2003. The structure and function of complex networks. SIAM Rev. 45:167-256
68. Palmer SM, Rosa MG. 2006. Quantitative analysis of the corticocortical projections to the middle temporal area in the marmoset monkey: Evolutionary and functional implications. Cereb Cortex. 16:1361-1375
69. Paxinos G, Huang XF, Toga AW. 2000. The rhesus monkey brain in stereotaxic coordinates. San Diego, CA: Academic Press
70. Perkel DJ, Bullier J, Kennedy H. 1986. Topography of the afferent connectivity of area 17 in the macaque monkey: A doublelabelling study. J Comp Neurol. 253:374-402
71. Petrides M, Pandya DN. 2009. Distinct parietal and temporal pathways to the homologues of Broca's area in the monkey. PLoS Biol. 7: E1000170
72. Petrides M, Pandya DN. 1999. Dorsolateral prefrontal cortex: Comparative cytoarchitectonic analysis in the human and the macaque brain and corticocortical connection patterns. Eur J Neurosci. 11:1011-1036
73. Petrides M, Pandya DN. 2006. Efferent association pathways originating in the caudal prefrontal cortex in the macaque monkey. J Comp Neurol. 498:227-251
74. Petrides M, Pandya DN. 1984. Projections to the frontal cortex from the posterior parietal region in the rhesus monkey. J Comp Neurol. 228:105-116
75. Rakic P. 1988. Specification of cerebral cortical areas. Science. 241:170-176
76. Ringo JL. 1991. Neuronal interconnection as a function of brain size. Brain Behav Evol. 38:1-6
77. Rockland KS. 1997. Element of cortical architecture: Hierarchy revisited. In: Rockland KS, Kaas JH, Peters A, editors. Extrastriate cortex in primates. New York: Plenum press. p. 243-293
78. Rockland KS, Saleem KS, Tanaka K. 1994. Divergent feedback connections from areasV4 and TEO in the macaque. Vis Neurosci. 11:579-600
79. Rockland KS, Van Hoesen GW. 1994. Direct temporal-occipital feedback connections to striate cortex (V1) in the macaque monkey. Cereb Cortex. 4:300-313
80. Rosa MG, Tweedale R. 2005. Brain maps, great and small: Lessons from comparative studies of primate visual cortical organization. Philos Trans R Soc Lond B Biol Sci. 360:665-691
81. Rubinov M, Sporns O. 2010. Complex network measures of brain connectivity: Uses and interpretations. Neuroimage. 52:1059-1069
82. Rushworth MFS, Boorman E, Mars RB. 2009. Comparing brain connections in different species using diffusion weighted imaging In: Johansen-Berg H, Behrens TEJ, editors. Diffusion MRI: From quantitative measurement to in vivo neuroanatomy. Amsterdam: Academic Press. pp. 445-460
83. Saleem KS, Logothetis NK. 2007. A combined MRI and histology atlas of the rhesus monkey brain in stereotaxic coordinates. Amsterdam, Boston: Elsevier/Academic Press
84. Scannell JW, Grant S, Payne BR, Baddeley R. 2000. On variability in the Density of corticocortical and thalamocortical connections. Philos Trans R Soc Lond B Biol Sci. 355:21-35
85. Schmahmann JD, Pandya DN. 2009. Fiber pathways of the brain. New York: Oxford University Press
86. Schüz A, Miller M. 2002. Cortical areas: Unity and diversity. London: Taylor and Francis
87. Seltzer B, Pandya DN. 1989. Frontal lobe connections of the superior temporal sulcus in the rhesus monkey. J Comp Neurol. 281:97-113
88. Sporns O, Honey CJ, Kotter R. 2007. IDentification and classification of hubs in brain networks. PLoS One. 2:e1049
89. Sporns O, Tononi G, Edelman GM. 2000. Theoretical neuroanatomy: Relating anatomical and functional connectivity in graphs and cortical connection matrices. Cereb Cortex. 10:127-141
90. Sporns O, Zwi JD. 2004. The small world of the cerebral cortex. Neuroinformatics. 2:145-162
91. Stephan KE, Kamper L, Bozkurt A, Burns GA, Young MP, Kotter R. 2001. Advanced database methodology for the Collation of Connectivity data on the Macaque brain (CoCoMac). Philos Trans R Soc Lond B Biol Sci. 356:1159-1186
92. Stepniewska I, Kaas JH. 1996. Topographic patterns of V2 cortical connections in macaque monkeys. J Comp Neurol. 371:129-152
93. Takada M, Nambu A, Hatanaka N, Tachibana Y, Miyachi S, Taira M, Inase M. 2004. Organization of prefrontal outflow toward frontal motor-related areas in macaque monkeys. Eur J Neurosci. 19:3328-3342
94. Tanne-Gariepy J, Rouiller EM, Boussaoud D. 2002. Parietal inputs to dorsal versus ventral premotor areas in the macaque monkey: EviDence for largely segregated visuomotor pathways. Exp Brain Res. 145:91-103
95. Van Essen DC. 2004. Surface-based approaches to spatial localization and registration in primate cerebral cortex. Neuroimage. 23(Suppl 1):S97-S107
96. Van Essen DC, Glasser MF, Dierker D, Harwell J. 2012. Cortical parcellations of the macaque monkey analyzed on surface-based atlases. Cereb Cortex. 22:2227-2240
97. Van Essen DC, Glasser MF, Dierker D, Harwell J, Coalson T. 2012. Parcellations and hemispheric asymmetries of human cerebral cortex analyzed on surface-based atalses. Cereb Cortex. 22:2241-2262
98. Van Essen DC, Harwell J, Hanlon D, Dickson J. 2005. Surface-based atlases and a database of cortical structure and function. In: Koslow SH, Subramaniam S, editors. Databasing the brain: From data to knowledge (neuroinformatics). NJ: John Wiley & Sons. p. 369-387
99. Van Essen DC, Newsome WT, Maunsell JH, Bixby JL. 1986. The projections from striate cortex (V1) to areas V2 and V3 in the macaque monkey: Asymmetries, areal boundaries, and patchy connections. J Comp Neurol. 244:451-480
100. Van Essen DC, Ugurbil K. 2012. The future of the human connectome. NeuroImage. 62:1299-1310
101. Van Essen DC, Ugurbil K, Auerbach E, Barch D, Behrens TE, Bucholz R, Chang A, Chen L, Corbetta M, Curtiss SW et al. 2012. The Human Connectome Project: A data acquisition perspective. NeuroImage. http://www.ncbi.nlm.nih. gov/pubmed/22366334 [Epub ahead of print]
102. Vezoli J, Falchier A, Jouve B, Knoblauch K, Young M, Kennedy H. 2004. Quantitative analysis of connectivity in the visual cortex: Extracting function from structure. Neuroscientist. 10: 476-482
103. Vincent JL, Patel GH, Fox MD, Snyder AZ, Baker JT, Van Essen DC, Zempel JM, Snyder LH, Corbetta M, Raichle ME. 2007. Intrinsic functional architecture in the anaesthetized monkey brain. Nature. 447:83-86
104. Wang Q, Sporns O, Burkhalter A. 2012. Network analysis of corticocortical connections reveals ventral and dorsal processing streams in mouse visual cortex. J Neurosci. 32:4386-4399
105. Wang W, Slotine JJ. 2005. On partial contraction analysis for coupled nonlinear oscillators. Biol Cybern. 92:38-53
106. Wang Y, Celebrini S, Trotter Y, Barone P. 2008. Visuo-Auditory interactions in the primary visual cortex of the behaving monkey: Electrophysiological eviDence. BMC Neurosci. 9:79
107. Watts DJ. 1999. Networks, Dynamics, and the small-world phenomenon. Am J Sociology. 105:493-527
108. Watts DJ, Strogatz SH. 1998. Collective dynamics of small-world networks. Nature. 393:440-442
109. Young MP. 1992. Objective analysis of the topological organization of the primate cortical visual system. Nature. 358:152-155
110. Young MP. 1993. The organization of neural systems in the primate cerebral cortex. Proc R Soc Lond B Biol Sci. 252:13-18
111. Zeki S. 1980. A direct projection from area V1 to area V3A of rhesus monkey visual cortex. Proc R Soc Lond B Biol Sci. 207:499-506
112. Zeki S. 2005. Introduction: Cerebral cartography 1905-2005. Philos Trans R Soc Lond B Biol Sci. 360:651-652
113. Zeki S, Shipp S. 1988. The functional logic of cortical connections. Nature. 335:311-317
114. Zeki SM. 1978. The cortical projections of foveal striate cortex in the rhesus monkey. J Physiol. 277:227-244