Phytochromes in Microorganisms

Handbook of Photosensory Receptors

Volumn , Issue , 2005, Pages 171-195

  Vierstra, Richard D ^a   Karniol, Baruch ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

Photosensory receptors; Phy superfamily; Phylogenetic analysis; Phytochromes in microorganisms

Indexed keywords

EID: 84889363788     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/352760510X.ch8     Document Type: Chapter

References (53)

1. Armitage, J.P. (1997) Arch. Microbiol. 168, 249-261.
2. Bhaya, D., Takahashi, A., and Grossman, A.R. (2001) Proc. Natl. Acad. Sci. USA 98, 7540-7545.
3. Bhoo, S.H., Davis, S.J., Walker, J., Karniol, B., and Vierstra, R.D. (2001) Nature 414, 776-779.
4. Bhoo, S.H., Hirano, T., Jeong, H.Y., Lee, J.G., Furuya, M., and Song, P.S. (1997) J. Amer. Chem. Soc. 119, 11717.
5. Braatsch, S., and Klug, G. (2004) Photosyn. Res. 79, 45-57.
6. Catlett, N.L., Yoder, O.C., and Turgeon, B.G. (2003) Eukaryotic Cell 2, 1151-1161.
7. Davis, S.J., Kurepa, J., and Vierstra, R.D. (1999a) Proc. Natl. Acad. Sci. USA 96, 6541-6546.
8. Davis, S.J., Vener, A.V., and Vierstra, R.D. (1999b) Science 286, 2517-2520.
9. Frankenberg, N., Mukougawa, K., Kohchi, T., and Lagarias, J.C. (2001) Plant Cell 13, 965-978.
10. Gambetta, G.A., and Lagarias, J.C. (2001) Proc. Natl. Acad. Sci. USA 98, 10566-10571.
11. Giraud, E., Fardoux, J., Fourrier, N., Hannibal, L., Genty, B., Bouyer, P., Dreyfus, B., and Vermeglio, A. (2002) Nature 417, 202-205.
12. Hader, D.P. (1987) In, Cyanobacteria (P. Fay and C. Van Baalen, eds) Elsevier, New York, NY, pp 325-345.
13. Herdman, M., Coursin, T., Rippka, R., Houmard, J., and Tandeau de Marsac, N. (2000) J. Mol. Evol. 51, 205-213.
14. Hubschmann, T., Borner, T., Hartmann, E., and Lamparter, T. (2001a) Eur. J. Biochem. 268, 2055-2063.
15. Hubschmann, T., Jorissen, H., Borner, T., Gartner, W., and de Marsac, N.T. (2001b) Eur. J. Biochem. 268, 3383-3389.
16. Hughes, J., Lamparter, T., Mittmann, F., Hartmann, E., Gartner, W., Wilde, A., and Borner, T. (1997) Nature 386, 663.
17. Inouye, M., and Dutta, R. (2003) Histidine Kinases in Signal Transmission Academic Press, NY.
18. Jiang, Z., Swem, L.R., Rushing, B.G., Devanathan, S., Tollin, G., and Bauer, C.E. (1999) Science 285, 406-409.
19. Jorissen, H., Quest, B., Lindner, I., de Marsac, N.T., and Gartner, W. (2002a) Photochem. Photobiol. 75, 554-559.
20. Jorissen, H., Quest, B., Remberg, A., Coursin, T., Braslavsky, S.E., Schaffner, K., de Marsac, N.T., and Gartner, W. (2002b) Eur. J. Biochem. 269, 2662-2671.
21. Karniol, B., and Vierstra, R.D. (2003) Proc. Natl. Acad. Sci. USA 100, 2807-2812.
22. Karniol, B., and Vierstra, R.D. (2004) J. Bacteriol. 186, 445-453.
23. Kehoe, D.M., and Grossman, A.R. (1996) Science 273, 1409-1412.
24. Kehoe, D.M., and Grossman, A.R. (1997) J Bacteriol. 179, 3914-3921.
25. Lamparter, T., Michael, N., Mittmann, F., and Esteban, B. (2002) Proc. Natl. Acad. Sci. USA 99, 11628-11633.
26. Lamparter, T., Michael, N., Caspani, O., Miyata, T., Shirai, K., and Inomata, K. (2003) J. Biol. Chem. 278, 33786-33792.
27. Lamparter, T., Carrascal, M., Michael, N., Martinez, E., Rottwinkel, G., and Abian, J. (2004) Biochemisty 43, 3659-3669.
28. Loros, J.J., and Dunlap, J.C. (2001) Ann. Rev. Physiol. 63, 757-794.
29. Mathews, S., and Sharrock, R.A. (1997) Plant Cell Environ. 20, 666-671.
30. Matsushita, T., Mochizuki, N., and Nagatani, A. (2003) Nature 424, 571-574.
31. Muramoto, T., Kohchi, T., Yokota, A., Hwang, I., and Goodman, H.M. (1999) Plant Cell 11, 335-348.
32. Mutsuda, M., Michel, K.P., Zhang, X.F., Montgomery, B.L., and Golden, S.S. (2003) J. Biol. Chem. 278, 19102-19110.
33. Ng, W.O., Grossman, A.R., and Bhaya, D. (2003) J. Bacteriol. 185, 1599-1607.
34. Park, C.M., Shim, J.Y., Yang, S.S., Kang, J.G., Kim, J.I., Luka, Z., and Song, P.S. (2000a) Biochemistry 39, 6349-6356.
35. Park, C.M., Kim, J.I., Yang, S.S., Kang, J.G., Kang, J.H., Shim, J.Y., Chung, Y.H., Park, Y.M., and Song, P.S. (2000b) Biochemistry 39, 10840-10847.
36. Quail, P.H. (2002) Nat. Rev. Mol. Cell. Biol. 3, 85-93.
37. Quest, B., and Gartner, W. (2004) Eur. J. Biochem. 271, 1117-1126.
38. Schmitz, O., Katayama, M., Williams, S.B., Kondo, T., and Golden, S.S. (2000) Science 289, 765-768.
39. Schneider-Poetsch, H.A. (1992) Photochem. Photobiol. 56, 839-846.
40. Smith, H. (2000) Nature 407, 585-591.
41. Starostzik, C., and Marwan, W. (1995) FEBS Lett. 370, 146-148.
42. Terauchi, K., Montgomery, B.L., Grossman, A.R., Lagarias, J.C., and Kehoe, D.M. (2004) Molec. Microbiol. 51, 567-577.
43. van der Horst, M.A., and Hellingwerf, K.J. (2004) Acc. Chem. Res. 37, 13-20.
44. Venter, J.C., Remington, K., Heidelberg, J.F., Halpern, A.L., Rusch, D., Eisen, J.A., Wu, D.Y., Paulsen, I., Nelson, K.E., Nelson, W., Fouts, D.E., Levy, S., Knap, A.H., Lomas, M.W., Nealson, K., White, O., Peterson, J., Hoffman, J., Parsons, R., Baden-Tillson, H., Pfannkoch, C., Rogers, Y.H., and Smith, H.O. (2004) Science 304, 66-74.
45. Vierstra, R.D. (2002) In Histidine Kinases in Signal Transduction (M. Inouya and R. Dutta eds.), pgs 273-295.
46. West, A.H., and Stock, A.M. (2001) Trends Biochem. Sci. 26, 369-376.
47. Wilde, A., Fiedler, B., and Borner, T. (2002) Molec. Microbiol. 44, 981-988.
48. Wilde, A., Churin, Y., Schubert, H., and Borner, T. (1997) FEBS Lett. 406, 89-92.
49. Wu, S.H., and Lagarias, J.C. (2000) Biochemistry 39, 13487-13495.
50. Wu, S.H., McDowell, M.T., and Lagarias, J.C. (1997) J. Biol. Chem. 272, 25700-25705.
51. Yeh, K.C., and Lagarias, J.C. (1998) Proc. Natl. Acad. Sci. USA 95, 13976-13981.
52. Yeh, K.C., Wu, S.H., Murphy, J.T., and Lagarias, J.C. (1997) Science 277, 1505-1508.
53. Zambre, M., Terryn, N., De Clercq, J., De Buck, S., Dillen, W., Van Montagu, M., Van Der Straeten, D., and Angenon, G. (2003) Planta 216, 580-586.