-
1
-
-
84888864566
-
Linear Mixed-Effects Models Using S4 Classes
-
(January 12, 2012)
-
Bates D, Maechler M (2010) lme4: Linear Mixed-Effects Models Using S4 Classes. The R Project for Statistical Computing. http://CRAN.R-project. org/package=lme4 (January 12, 2012)
-
(2010)
The R Project for Statistical Computing
-
-
Bates, D.1
Maechler, M.2
-
2
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc B 57: 289-300
-
(1995)
J R Stat Soc B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
3
-
-
8744317168
-
Use of real-time PCR for determining copy number and zygosity in transgenic plants
-
Bubner B, Baldwin IT (2004) Use of real-time PCR for determining copy number and zygosity in transgenic plants. Plant Cell Rep 23: 263-271
-
(2004)
Plant Cell Rep
, vol.23
, pp. 263-271
-
-
Bubner, B.1
Baldwin, I.T.2
-
4
-
-
0034256090
-
Calmodulin: A prototypical calcium sensor
-
Chin D, Means AR (2000) Calmodulin: a prototypical calcium sensor. Trends Cell Biol 10: 322-328
-
(2000)
Trends Cell Biol
, vol.10
, pp. 322-328
-
-
Chin, D.1
Means, A.R.2
-
5
-
-
0032447801
-
Floral dip: A simplified method for Agrobacteriummediated transformation of Arabidopsis thaliana
-
Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacteriummediated transformation of Arabidopsis thaliana. Plant J 16: 735-743
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
6
-
-
77954763024
-
Plant immunity: Towards an integrated view of plant-pathogen interactions
-
Dodds PN, Rathjen JP (2010) Plant immunity: towards an integrated view of plant-pathogen interactions. Nat Rev Genet 11: 539-548
-
(2010)
Nat Rev Genet
, vol.11
, pp. 539-548
-
-
Dodds, P.N.1
Rathjen, J.P.2
-
7
-
-
4444371862
-
NPR1, all things considered
-
Dong X (2004) NPR1, all things considered. Curr Opin Plant Biol 7: 547-552
-
(2004)
Curr Opin Plant Biol
, vol.7
, pp. 547-552
-
-
Dong, X.1
-
8
-
-
0025718335
-
Induction of Arabidopsis defense genes by virulent and avirulent Pseudomonas syringae strains and by a cloned avirulence gene
-
Dong X, Mindrinos M, Davis KR, Ausubel FM (1991) Induction of Arabidopsis defense genes by virulent and avirulent Pseudomonas syringae strains and by a cloned avirulence gene. Plant Cell 3: 61-72
-
(1991)
Plant Cell
, vol.3
, pp. 61-72
-
-
Dong, X.1
Mindrinos, M.2
Davis, K.R.3
Ausubel, F.M.4
-
10
-
-
33644872218
-
Gateway-compatible vectors for plant functional genomics and proteomics
-
Earley KW, Haag JR, Pontes O, Opper K, Juehne T, Song K, Pikaard CS (2006) Gateway-compatible vectors for plant functional genomics and proteomics. Plant J 45: 616-629
-
(2006)
Plant J
, vol.45
, pp. 616-629
-
-
Earley, K.W.1
Haag, J.R.2
Pontes, O.3
Opper, K.4
Juehne, T.5
Song, K.6
Pikaard, C.S.7
-
11
-
-
0033020734
-
EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases
-
Falk A, Feys BJ, Frost LN, Jones JD, Daniels MJ, Parker JE (1999) EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases. Proc Natl Acad Sci USA 96: 3292-3297
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 3292-3297
-
-
Falk, A.1
Feys, B.J.2
Frost, L.N.3
Jones, J.D.4
Daniels, M.J.5
Parker, J.E.6
-
12
-
-
84862298224
-
NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants
-
Fu ZQ, Yan S, Saleh A, Wang W, Ruble J, Oka N, Mohan R, Spoel SH, Tada Y, Zheng N, et al (2012) NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants. Nature 486: 228-232
-
(2012)
Nature
, vol.486
, pp. 228-232
-
-
Fu, Z.Q.1
Yan, S.2
Saleh, A.3
Wang, W.4
Ruble, J.5
Oka, N.6
Mohan, R.7
Spoel, S.H.8
Tada, Y.9
Zheng, N.10
-
13
-
-
51749085388
-
HELIQUEST: A Web server to screen sequences with specific alpha-helical properties
-
Gautier R, Douguet D, Antonny B, Drin G (2008) HELIQUEST: a Web server to screen sequences with specific alpha-helical properties. Bioinformatics 24: 2101-2102
-
(2008)
Bioinformatics
, vol.24
, pp. 2101-2102
-
-
Gautier, R.1
Douguet, D.2
Antonny, B.3
Drin, G.4
-
14
-
-
0029898756
-
Isolation of Arabidopsis mutants with enhanced disease susceptibility by direct screening
-
Glazebrook J, Rogers EE, Ausubel FM (1996) Isolation of Arabidopsis mutants with enhanced disease susceptibility by direct screening. Genetics 143: 973-982
-
(1996)
Genetics
, vol.143
, pp. 973-982
-
-
Glazebrook, J.1
Rogers, E.E.2
Ausubel, F.M.3
-
15
-
-
0040293366
-
A single locus determines sensitivity to bacterial flagellin in Arabidopsis thaliana
-
Gómez-Gómez L, Felix G, Boller T (1999) A single locus determines sensitivity to bacterial flagellin in Arabidopsis thaliana. Plant J 18: 277-284
-
(1999)
Plant J
, vol.18
, pp. 277-284
-
-
Gómez-Gómez, L.1
Felix, G.2
Boller, T.3
-
16
-
-
36148958240
-
Bacteria-derived peptidoglycans constitute pathogen-associated molecular patterns triggering innate immunity in Arabidopsis
-
Gust AA, Biswas R, Lenz HD, Rauhut T, Ranf S, Kemmerling B, Götz F, Glawischnig E, Lee J, Felix G, et al (2007) Bacteria-derived peptidoglycans constitute pathogen-associated molecular patterns triggering innate immunity in Arabidopsis. J Biol Chem 282: 32338-32348
-
(2007)
J Biol Chem
, vol.282
, pp. 32338-32348
-
-
Gust, A.A.1
Biswas, R.2
Lenz, H.D.3
Rauhut, T.4
Ranf, S.5
Kemmerling, B.6
Götz, F.7
Glawischnig, E.8
Lee, J.9
Felix, G.10
-
17
-
-
0033539698
-
Arabidopsis thaliana PAD4 encodes a lipase-like gene that is important for salicylic acid signaling
-
Jirage D, Tootle TL, Reuber TL, Frost LN, Feys BJ, Parker JE, Ausubel FM, Glazebrook J (1999) Arabidopsis thaliana PAD4 encodes a lipase-like gene that is important for salicylic acid signaling. Proc Natl Acad Sci USA 96: 13583-13588
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 13583-13588
-
-
Jirage, D.1
Tootle, T.L.2
Reuber, T.L.3
Frost, L.N.4
Feys, B.J.5
Parker, J.E.6
Ausubel, F.M.7
Glazebrook, J.8
-
18
-
-
33751100626
-
The plant immune system
-
Jones JD, Dangl JL (2006) The plant immune system. Nature 444: 323-329
-
(2006)
Nature
, vol.444
, pp. 323-329
-
-
Jones, J.D.1
Dangl, J.L.2
-
19
-
-
37549065936
-
Identification of a calmodulin-binding NAC protein as a transcriptional repressor in Arabidopsis
-
Kim HS, Park BO, Yoo JH, Jung MS, Lee SM, Han HJ, Kim KE, Kim SH, Lim CO, Yun DJ, et al (2007) Identification of a calmodulin-binding NAC protein as a transcriptional repressor in Arabidopsis. J Biol Chem 282: 36292-36302
-
(2007)
J Biol Chem
, vol.282
, pp. 36292-36302
-
-
Kim, H.S.1
Park, B.O.2
Yoo, J.H.3
Jung, M.S.4
Lee, S.M.5
Han, H.J.6
Kim, K.E.7
Kim, S.H.8
Lim, C.O.9
Yun, D.J.10
-
20
-
-
84867536105
-
A NAC transcription factor and SNI1 cooperatively suppress basal pathogen resistance in Arabidopsis thaliana
-
Kim HS, Park HC, Kim KE, Jung MS, Han HJ, Kim SH, Kwon YS, Bahk S, An J, Bae DW, et al (2012) A NAC transcription factor and SNI1 cooperatively suppress basal pathogen resistance in Arabidopsis thaliana. Nucleic Acids Res 40: 9182-9192
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 9182-9192
-
-
Kim, H.S.1
Park, H.C.2
Kim, K.E.3
Jung, M.S.4
Han, H.J.5
Kim, S.H.6
Kwon, Y.S.7
Bahk, S.8
An, J.9
Bae, D.W.10
-
21
-
-
84880789726
-
Roles of CAMTA transcription factors and salicylic acid in configuring the low-temperature transcriptome and freezing tolerance of Arabidopsis
-
Kim Y, Park S, Gilmour SJ, Thomashow MF (2013) Roles of CAMTA transcription factors and salicylic acid in configuring the low-temperature transcriptome and freezing tolerance of Arabidopsis. Plant J 75: 364-376
-
(2013)
Plant J
, vol.75
, pp. 364-376
-
-
Kim, Y.1
Park, S.2
Gilmour, S.J.3
Thomashow, M.F.4
-
22
-
-
0038826955
-
Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes
-
Mou Z, Fan W, Dong X (2003) Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes. Cell 113: 935-944
-
(2003)
Cell
, vol.113
, pp. 935-944
-
-
Mou, Z.1
Fan, W.2
Dong, X.3
-
23
-
-
0037649615
-
Microbial elicitors induce activation and dual phosphorylation of the Arabidopsis thaliana MAPK 6
-
Nühse TS, Peck SC, Hirt H, Boller T (2000) Microbial elicitors induce activation and dual phosphorylation of the Arabidopsis thaliana MAPK 6. J Biol Chem 275: 7521-7526
-
(2000)
J Biol Chem
, vol.275
, pp. 7521-7526
-
-
Nühse, T.S.1
Peck, S.C.2
Hirt, H.3
Boller, T.4
-
24
-
-
84863304598
-
-
R Development Core Team. R Foundation for Statistical Computing, Vienna
-
R Development Core Team (2013) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna
-
(2013)
R: A Language and Environment for Statistical Computing
-
-
-
25
-
-
80053565684
-
Interplay between calcium signalling and early signalling elements during defence responses to microbe-or damage-associated molecular patterns
-
Ranf S, Eschen-Lippold L, Pecher P, Lee J, Scheel D (2011) Interplay between calcium signalling and early signalling elements during defence responses to microbe-or damage-associated molecular patterns. Plant J 68: 100-113
-
(2011)
Plant J
, vol.68
, pp. 100-113
-
-
Ranf, S.1
Eschen-Lippold, L.2
Pecher, P.3
Lee, J.4
Scheel, D.5
-
26
-
-
84863013334
-
Defense-related calcium signaling mutants uncovered via a quantitative highthroughput screen in Arabidopsis thaliana
-
Ranf S, Grimmer J, Pöschl Y, Pecher P, Chinchilla D, Scheel D, Lee J (2012) Defense-related calcium signaling mutants uncovered via a quantitative highthroughput screen in Arabidopsis thaliana. Mol Plant 5: 115-130
-
(2012)
Mol Plant
, vol.5
, pp. 115-130
-
-
Ranf, S.1
Grimmer, J.2
Pöschl, Y.3
Pecher, P.4
Chinchilla, D.5
Scheel, D.6
Lee, J.7
-
27
-
-
0037155853
-
Genes encoding calmodulin-binding proteins in the Arabidopsis genome
-
Reddy VS, Ali GS, Reddy AS (2002) Genes encoding calmodulin-binding proteins in the Arabidopsis genome. J Biol Chem 277: 9840-9852
-
(2002)
J Biol Chem
, vol.277
, pp. 9840-9852
-
-
Reddy, V.S.1
Ali, G.S.2
Reddy, A.S.3
-
28
-
-
0030945196
-
Sequence motifs for calmodulin recognition
-
Rhoads AR, Friedberg F (1997) Sequence motifs for calmodulin recognition. FASEB J 11: 331-340
-
(1997)
FASEB J
, vol.11
, pp. 331-340
-
-
Rhoads, A.R.1
Friedberg, F.2
-
29
-
-
84869047722
-
Co-expression analysis identifies putative targets for CBP60g and SARD1 regulation
-
Truman W, Glazebrook J (2012) Co-expression analysis identifies putative targets for CBP60g and SARD1 regulation. BMC Plant Biol 12: 216
-
(2012)
BMC Plant Biol
, vol.12
, pp. 216
-
-
Truman, W.1
Glazebrook, J.2
-
30
-
-
41849117309
-
Interplay between MAMP-triggered and SA-mediated defense responses
-
Tsuda K, Sato M, Glazebrook J, Cohen JD, Katagiri F (2008) Interplay between MAMP-triggered and SA-mediated defense responses. Plant J 53: 763-775
-
(2008)
Plant J
, vol.53
, pp. 763-775
-
-
Tsuda, K.1
Sato, M.2
Glazebrook, J.3
Cohen, J.D.4
Katagiri, F.5
-
31
-
-
74249122811
-
Network properties of robust immunity in plants
-
Tsuda K, Sato M, Stoddard T, Glazebrook J, Katagiri F (2009) Network properties of robust immunity in plants. PLoS Genet 5: e1000772
-
(2009)
PLoS Genet
, vol.5
-
-
Tsuda, K.1
Sato, M.2
Stoddard, T.3
Glazebrook, J.4
Katagiri, F.5
-
32
-
-
84862492158
-
Calmodulinbinding protein CBP60g is a positive regulator of both disease resistance and drought tolerance in Arabidopsis
-
Wan D, Li R, Zou B, Zhang X, Cong J, Wang R, Xia Y, LiG(2012) Calmodulinbinding protein CBP60g is a positive regulator of both disease resistance and drought tolerance in Arabidopsis. Plant Cell Rep 31: 1269-1281
-
(2012)
Plant Cell Rep
, vol.31
, pp. 1269-1281
-
-
Wan, D.1
Li, R.2
Zou, B.3
Zhang, X.4
Cong, J.5
Wang, R.6
Xia, Y.7
Li, G.8
-
33
-
-
55549130294
-
The genetic network controlling the Arabidopsis transcriptional response to Pseudomonas syringae pv. maculicola: Roles of major regulators and the phytotoxin coronatine
-
Wang L, Mitra RM, Hasselmann KD, SatoM, Lenarz-Wyatt L, Cohen JD, Katagiri F, Glazebrook J (2008) The genetic network controlling the Arabidopsis transcriptional response to Pseudomonas syringae pv. maculicola: roles of major regulators and the phytotoxin coronatine. Mol Plant Microbe Interact 21: 1408-1420
-
(2008)
Mol Plant Microbe Interact
, vol.21
, pp. 1408-1420
-
-
Wang, L.1
Mitra, R.M.2
Hasselmann, K.D.3
Sato, M.4
Lenarz-Wyatt, L.5
Cohen, J.D.6
Katagiri, F.7
Glazebrook, J.8
-
34
-
-
61449144555
-
Arabidopsis CaM binding protein CBP60g contributes to MAMPinduced SA accumulation and is involved in disease resistance against Pseudomonas syringae
-
Wang L, Tsuda K, Sato M, Cohen JD, Katagiri F, Glazebrook J (2009) Arabidopsis CaM binding protein CBP60g contributes to MAMPinduced SA accumulation and is involved in disease resistance against Pseudomonas syringae. PLoS Pathog 5: e1000301
-
(2009)
PLoS Pathog
, vol.5
-
-
Wang, L.1
Tsuda, K.2
Sato, M.3
Cohen, J.D.4
Katagiri, F.5
Glazebrook, J.6
-
35
-
-
80052503746
-
CBP60g and SARD1 play partially redundant critical roles in salicylic acid signaling
-
Wang L, Tsuda K, Truman W, Sato M, Nguyen V, Katagiri F, Glazebrook J (2011) CBP60g and SARD1 play partially redundant critical roles in salicylic acid signaling. Plant J 67: 1029-1041
-
(2011)
Plant J
, vol.67
, pp. 1029-1041
-
-
Wang, L.1
Tsuda, K.2
Truman, W.3
Sato, M.4
Nguyen, V.5
Katagiri, F.6
Glazebrook, J.7
-
37
-
-
0035969499
-
Isochorismate synthase is required to synthesize salicylic acid for plant defence
-
Wildermuth MC, Dewdney J, Wu G, Ausubel FM(2001) Isochorismate synthase is required to synthesize salicylic acid for plant defence. Nature 414: 562-565
-
(2001)
Nature
, vol.414
, pp. 562-565
-
-
Wildermuth, M.C.1
Dewdney, J.2
Wu, G.3
Ausubel, F.M.4
-
38
-
-
0003161862
-
Calmodulin target database
-
Yap KL, Kim J, Truong K, Sherman M, Yuan T, Ikura M (2000) Calmodulin target database. J Struct Funct Genomics 1: 8-14
-
(2000)
J Struct Funct Genomics
, vol.1
, pp. 8-14
-
-
Yap, K.L.1
Kim, J.2
Truong, K.3
Sherman, M.4
Yuan, T.5
Ikura, M.6
-
39
-
-
0032499777
-
The tobacco wounding-activated mitogen-activated protein kinase is encoded by SIPK
-
Zhang S, Klessig DF (1998) The tobacco wounding-activated mitogen-activated protein kinase is encoded by SIPK. Proc Natl Acad Sci USA 95: 7225-7230
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 7225-7230
-
-
Zhang, S.1
Klessig, D.F.2
-
40
-
-
0033863117
-
Multiple levels of tobacco WIPK activation during the induction of cell death by fungal elicitins
-
Zhang S, Liu Y, Klessig DF (2000) Multiple levels of tobacco WIPK activation during the induction of cell death by fungal elicitins. Plant J 23: 339-347
-
(2000)
Plant J
, vol.23
, pp. 339-347
-
-
Zhang, S.1
Liu, Y.2
Klessig, D.F.3
-
41
-
-
0033033724
-
Interaction of NPR1 with basic leucine zipper protein transcription factors that bind sequences required for salicylic acid induction of the PR-1 gene
-
Zhang Y, Fan W, Kinkema M, Li X, Dong X (1999) Interaction of NPR1 with basic leucine zipper protein transcription factors that bind sequences required for salicylic acid induction of the PR-1 gene. Proc Natl Acad Sci USA 96: 6523-6528
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 6523-6528
-
-
Zhang, Y.1
Fan, W.2
Kinkema, M.3
Li, X.4
Dong, X.5
-
42
-
-
78149244920
-
Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors
-
Zhang Y, Xu S, Ding P, Wang D, Cheng YT, He J, GaoM, Xu F, Li Y, Zhu Z, et al (2010) Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors. Proc Natl Acad Sci USA 107: 18220-18225
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 18220-18225
-
-
Zhang, Y.1
Xu, S.2
Ding, P.3
Wang, D.4
Cheng, Y.T.5
He, J.6
Gao, M.7
Xu, F.8
Li, Y.9
Zhu, Z.10
-
43
-
-
1942520270
-
Bacterial disease resistance in Arabidopsis through flagellin perception
-
Zipfel C, Robatzek S, Navarro L, Oakeley EJ, Jones JD, Felix G, Boller T (2004) Bacterial disease resistance in Arabidopsis through flagellin perception. Nature 428: 764-767
-
(2004)
Nature
, vol.428
, pp. 764-767
-
-
Zipfel, C.1
Robatzek, S.2
Navarro, L.3
Oakeley, E.J.4
Jones, J.D.5
Felix, G.6
Boller, T.7
|