Flexible docking and refinement with a coarse-grained protein model using ATTRACT

Proteins: Structure, Function and Bioinformatics

Volumn 81, Issue 12, 2013, Pages 2167-2174

  De Vries, Sjoerd ^a   Zacharias, Martin ^a  

^a TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

Docking minimization; Elastic network model; Induced fit; Protein protein complex formation; Protein protein interaction

Indexed keywords

COLICIN; COLICIN E2; FERREDOXIN; HEMAGGLUTININ; HEPARIN FRAGMENT; METHYLTRANSFERASE; UNCLASSIFIED DRUG; UNSPECIFIC MONOOXYGENASE; XYLAN ENDO 1,3 BETA XYLOSIDASE; ZINOSTATIN;

ARTICLE; COARSE GRAINED PROTEIN MODEL; COMPLEX FORMATION; CONFORMATIONAL TRANSITION; DIELECTRIC CONSTANT; ELECTRON TRANSPORT; ENZYME ACTIVE SITE; HYDRATION; MODEL; MOLECULAR DOCKING; MOLECULAR DYNAMICS; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; STATIC ELECTRICITY;

DOCKING MINIMIZATION; ELASTIC NETWORK MODEL; INDUCED FIT; PROTEIN-PROTEIN COMPLEX FORMATION; PROTEIN-PROTEIN INTERACTION;

ALGORITHMS; COMPUTATIONAL BIOLOGY; CRYSTALLOGRAPHY, X-RAY; GENOMICS; MODELS, MOLECULAR; MOLECULAR DOCKING SIMULATION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN INTERACTION MAPPING; PROTEINS; SOFTWARE;

EID: 84888305906     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.24400     Document Type: Article

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