HLA-A, HLA-B and HLA-DRB1 haplotype frequencies in Piauí's volunteer bone marrow donors enrolled at the Brazilian registry

Human Immunology

Volumn 74, Issue 12, 2013, Pages 1598-1602

  Carvalho, M G ^a   Tsuneto, L T ^b   Moita Neto, J M ^a   Sousa, L C D M ^a   Sales Filho, H L A ^a   Macedo M B ^a   Barroso, J R P M ^a   Pereira, E M ^a   Araujo A S ^a   Silva, A S ^a   Monte, S J H ^a  

^a FEDERAL UNIVERSITY OF PIAUÍ   (Brazil)

^b STATE UNIVERSITY OF MARINGÁ   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

HLA A ANTIGEN; HLA A2 ANTIGEN; HLA B ANTIGEN; HLA DRB1 ANTIGEN;

ADULT; AMERICAN INDIAN; ARTICLE; BONE MARROW; BRAZIL; CAUCASIAN; ETHNICITY; FEMALE; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HETEROZYGOSITY; HISPANIC; HUMAN; MAJOR CLINICAL STUDY; POPULATION; PRIORITY JOURNAL; REGISTER;

BMDR; BMT; BONE MARROW DONOR REGISTRIES; BONE MARROW TRANSPLANTATION; HCA; HIERARCHICAL CLUSTER ANALYSIS; HLA; HUMAN LEUKOCYTE ANTIGEN; LD; LINKAGE DISEQUILIBRIUM; NATIONAL MARROW DONOR PROGRAM; NATIONAL REGISTRY OF BONE MARROW RECEPTORS; NATIONAL REGISTRY OF VOLUNTEER BONE MARROW DONORS; NMDP; PCA; PCR-SSOPH; POLYMERASE CHAIN REACTION-SEQUENCE-SPECIFIC OLIGONUCLEOTIDE PROBE HYBRIDIZATION; PRINCIPAL COMPONENT ANALYSIS; REDOME; REREME; VBMD; VOLUNTEER BONE MARROW DONORS;

ADOLESCENT; ADULT; ALLELES; BONE MARROW; BRAZIL; CLUSTER ANALYSIS; FEMALE; GENE FREQUENCY; HAPLOTYPES; HLA-A ANTIGENS; HLA-B ANTIGENS; HLA-DRB1 CHAINS; HUMANS; LINKAGE DISEQUILIBRIUM; MALE; MIDDLE AGED; REGISTRIES; TISSUE DONORS; VOLUNTEERS; YOUNG ADULT;

EID: 84888199352     PISSN: 01988859     EISSN: 18791166     Source Type: Journal    
DOI: 10.1016/j.humimm.2013.08.283     Document Type: Article

References (33)

1. Moraes J.R., Moraes M.E., Esteves N.M., Bendit R.K., Romero M., Favrin M.A., et al. Brazilian bone marrow bank and registry. Human Immunol 1994, 40:114.
2. Bortolotto A.S., Petry M.G., da Silveira J.G., Raya A.R., Fernandes S.R., Neumann J., et al. HLA-A, -B, and -DRB1 allelic and haplotypic diversity in a sample of bone marrow volunteer donors from Rio Grande do Sul State, Brazil. Hum Immunol 2012, 73:180.
3. Rosales T., Guilherme L., Chiarella J., Marin M.L., Rosales C., Melo C.P., et al. Human leukocyte A and B antigen, gene and haplotype frequencies in the population of the city of São Paulo in Brazil. Braz J Med Biol Res 1992, 25:39.
4. Ruiz T.M., da Costa S.M., Ribas F., Luz P.R., Lima S.S., Da Graca Bicalho M. Human leukocyte antigen allelic groups and haplotypes in a brazilian sample of volunteer donors for bone marrow transplant in Curitiba, Parana, Brazil. Transplant Proc 2005, 37:2293.
5. Monte S.J.H., Moita Neto J.M., Rampim G.F., Shulzhenko N., Morgun A., Gerbase-Delima M. Polimorfismo do sistema HLA em uma amostra de mestiços da população de Teresina, Piauí. Rev Assoc Med Bras 2004, 50:422.
6. Nigam P., Dellalibera E., MaurÎcio-da-Silva L., Donadi E.A., Silva R.S. Polymorphism of HLA class I genes in the Brazilian population from the northeastern state of Pernambuco corroborates anthropological evidence of its origin. Tissue Antigens 2004, 64:204.
7. IBGE: Pesquisa Nacional por amostra de domicílios e contagem da População - CENSO 2010. Instituto Brasileiro de Geografia e Estatística. 2012.
8. Barroso JPM. EpHLA Converter. vol 2012. Teresina; 2012.
9. Excoffier L., Slatkin M. Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population. Mol Biol Evol 1995, 12:921.
10. Imanishi T., Akaza T., Kimura A., Tokunaga K., Gojobori T. Allele and haplotype frequencies for HLA and complement loci in various ethni groups. HLA 1991 proceedings of the eleventh international histocompatibility workshop and conference 1992, 1065. Oxford Science, New York. K. Tsuji, M. Aizawa, T. Sasazuki (Eds.).
11. Guo S.W., Thompson E.A. Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 1992, 48:361.
12. Watterson G.A. The homozygosity test of neutrality. Genetics 1978, 88:405.
13. Hartl D.L., Clark A.G. Principles of population genetics 1997, Sinauer Associates, Inc., Sunderland. 3rd.
14. Ewens W.J. The sampling theory of selectively neutral alleles. Theor Popul Biol 1972, 3:87.
15. Excoffier L., Laval G., Schneider S. Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol Bioinform Online 2005, 1:47.
16. Bouzas LFS. Análise da capacidade do REDOME/RENACORD em suprir as necessidades dos pacientes registrados no REREME. Instintuto Nacional do Câncer, vol Doutorado. Rio de Janeiro: Programa de Pósgraduação em Oncologia/INCA; 2011 (p 91).
17. Carvalho M.G., Sales Filho H.L.A., Macêdo M.B., Barroso J.R.P.M., Sousa L.C.D.M., Araújo A.S., et al. Distribuição de Alelos e Haplótipos de Antígenos Leucocitários Humanos Loci A, B e DRB1 em uma amostra de Doadores Voluntários de Medula Óssea (DVMO) do Piauí. Rev Bras Hematol Hemoter 2012, 34:17.
18. Macêdo M.B., Hemonorte, Carvalho M.G., Moita Neto J.M.M., Tsuneto L.T., Silva A.S., et al. Distribuição de Alelos e Haplótipos de Antígenos Leucocitários Humanos Loci A, B e DRB1 em uma amostra de Doadores Voluntários de Medula Óssea (DVMO) do Rio Grande do Norte. Rev Bras Hematol Hemoter 2012, 34:19.
19. Allele*Frequencies in Worldwide Populations The Allele Frequency Net Database, 2013.
20. Lazaro A.M., Moraes M.E., Marcos C.Y., Moraes J.R., Fernandez-Vina M.A., Stastny P. Evolution of HLA-class I compared to HLA-class II polymorphism in Terena, a South-American Indian tribe. Hum Immunol 1999, 60:1138.
21. Maiers M., Gragert L., Klitz W. High-resolution HLA alleles and haplotypes in the United States population. Hum Immunol 2007, 68:779.
22. Moscoso J., Seclen S., Serrano-Vela J.I., Villena A., Martinez-Laso J., Zamora J., et al. HLA genes in Lamas Peruvian-Amazonian Amerindians. Mol Immunol 2006, 43:1881.
23. Ribas F., Oliveira L.A., Petzl-Erler M.L., Bicalho M.G. Major histocompatibility complex class I chain-related gene A polymorphism and linkage disequilibrium with HLA-B alleles in Euro-Brazilians. Tissue Antigens 2008, 72:532.
24. Piazza A., Olivetti E., Griffo R.M. The distribution of HLA antigens in Italy. Genes Geogr 1989, 3:141.
25. Carvalho A.S. HLA-A, -B and -C markers in the Portuguese population. Tissue Antigens 1983, 21:39.
26. Lewortin R.C. The genetic basis of evolutionary change 1974, Columbia University Press, New York.
27. Barbujani G., Magagni A., Minch E., Cavalli-Sforza L.L. An apportinment of human DNA diversity. Proc Natl Acad Sci USA 1997, 94:4516.
28. Roseberg N.A., Mahajan S., Ramachandran S., Zhao C., Pritchard J.K. Clines, cluster, and the effect of study design on the inference of human population structure. PLoS Genet 2005, 1:70.
29. Wang S., Lewis C.M., Jakobsson M., Ramachandran S., Ray N., Bedoya G., et al. Genetic variation and population structure in native Americans. PLoS Genet 2007, 3:e185.
30. Dias CC. PYAUHY das origens à nova Capital. 2nd ed. Nova Expansão Gráfica e editora Ltda; 2009.
31. Brandão T.M.P. A Elite Colonial Piauiense: Família e Poder 1995, Fundação Cultural Monsenhor Chaves, Teresina.
32. Pimenta J.R., Zuccherato L.W., Debes A.A., Maselli L., Soares R.P., Moura-Neto R.S. Color and genomic ancestry in Brazilians: a study with forensic microsatellites. Hum Hered 2006, 62:190.
33. Pena S.D.J., Bastos-Rodrigues L., Pimenta J.R., Bydlowski S.P. DNA tests probe the genomic ancestry of Brazilians. Braz J Med Biol Res 2009, 42:870.