Roduction of citrate by anaerobic fungi in the presence of co-culture methanogens as revealed by 1H NMR spectrometry

Asian-Australasian Journal of Animal Sciences

Volumn 26, Issue 10, 2013, Pages 1416-1423

  Cheng, Yan Fen ^a   Jin, Wei ^a   Mao, Sheng Yong ^a   Zhu, Wei Yun ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

Author keywords

Citrate; Methanobrevibacter thaueri; Nuclear magnetic resonance; Piromyces sp. F1

Indexed keywords

EID: 84887955687     PISSN: 10112367     EISSN: 19765517     Source Type: Journal    
DOI: 10.5713/ajas.2013.13134     Document Type: Article

References (25)

1. Akhmanova, A., F. G. J. Voncken, K. M. Hosea, H. Harhangi, J. T. Keltjens, H. J. M. op den Camp, G. D. Vogels, and J. H. P. Hackstein. 1999. A hydrogenosome with pyruvate formate-lyase: anaerobic chytrid fungi use an alternative route for pyruvate catabolism. Mol. Microbiol. 32:1103-1114.
2. Balch, W. E., G. E. Fox, L. J. Magrum, C. R. Woese, and R. S. Wolfe. 1979. Methanogens: reevaluation of a unique biological group. Microbiol. Rev. 43:260-296.
3. Bauchop, T. and D. O. Mountfort. 1981. Cellulose fermentation by a rumen anaerobic fungus in both the absence and the presence of rumen methanogens. Appl. Environ. Microbiol. 42:1103-1110.
4. Beckonert, O., H. C. Keun, T. M. Ebbels, J. Bundy, E. Holmes, J. C. Lindon, and J. K. Nicholson. 2007. Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts. Nat. Protoc. 2:2692-2703.
5. Boxma, B., F. Voncken, S. Jannink, T. van Alen, A. Akhmanova, S. W. van Weelden, J. J. van Hellemond, G. Ricard, M. Huynen, A. G. Tielens, and J. H. Hackstein. 2004. The anaerobic chytridiomycete fungus Piromyces sp. E2 produces ethanol via pyruvate: formate lyase and an alcohol dehydrogenase E. Mol. Microbiol. 51:1389-1399.
6. Carrieri, D., K. McNeely, A. C. De Roo, N. Nennette, I. Pelczer, and G. C. Dismukes. 2009. Identification and quantification of water-soluble metabolites by cryoprobe-assisted nuclear magnetic resonance spectroscopy applied to microbial fermentation. Magn. Reson. Chem. 47:S138-S146.
7. Cheng, Y. F., J. E. Edwards, G. G. Allison, W. Y. Zhu, and M. K. Theodorou. 2009. Diversity and activity of enriched ruminal cultures of anaerobic fungi and methanogens grown together on lignocellulose in consecutive batch culture. Bioresour. Technol. 100:4821-4828.
8. Cheng, Y. F., S. Y. Mao, C. X. Pei, J. X. Liu, and W. Y. Zhu. 2006. Detection and diversity analysis of rumen methanogens in co-cultures with anaerobic fungi. Acta Microbiologica Sinica 46: 879-883.
9. Chikayama, E., M. Suto, T. Nishihara, K. Shinozaki, T. Hirayama, and J. Kikuchi. 2008. Systematic NMR analysis of stable isotope labeled metabolite mixtures in plant and animal systems: coarse grained views of metabolic pathways. PLoS ONE 3: e3805.
10. Grivet, J. P. 2001. NMR and microorganisms. Curr. Issues Mol. Biol. 3:7-14.
11. Grivet, J. P. and A. M. Delort. 2009. NMR for microbiology: In vivo and in situ applications. Prog. Nucl. Magn. Reson. Spectrosc. 54:1-53.
12. Hungate, R. E. 1982. Methane formation and cellulose digestion biochemical ecology and microbiology of the rumen ecosystem. Experimenta 38:189-192.
13. Jin, W., Y. F. Cheng, S. Y. Mao, and W. Y. Zhu. 2011. Isolation of natural cultures of anaerobic fungi and indigenously associated methanogens from herbivores and their bioconversion of lignocellulosic materials to methane. Bioresour. Technol. 102:7925-7931.
14. Joblin, K. N., G. E. Naylor, and A. G. Williams. 1990. Effect of Methanobrevibacter smithii on xylanolytic activity of anaerobic ruminal fungi. Appl. Environ. Microbiol. 56:2287-2295.
15. Kwon, M., J. Song, J. K. Ha, H. S. Park, and J. Chang. 2009. Analysis of functional genes in carbohydrate metabolic pathway of anaerobic rumen fungus Neocallimastix frontalis PMA02. Asian-Aust. J. Anim. Sci. 22:1555-1565.
16. Liu J. H. 2009. Metabolic profiles of natural co-cultures of anaerobic fungi and methanogens in vitro and the production of lactate. Ma.D. Thesis, Nanjing Agricultural University, Nanjing, China.
17. Marvin-Sikkema, F. D., A. J. Richardson, C. S. Steward, J. C. Gottschal, and R. A. Prins. 1990. Influence of hydrogen-consuming bacteria on cellulose degradation by anaerobic fungi. Appl. Environ. Microbiol. 56:3793-3797.
18. Mountfort, D. O., R. A. Asher, and T. Bauchop. 1982. Fermentation of cellulose to methane and carbon dioxide by a rumen anaerobic fungus in a triculture with Methanobrevibacter sp. Strain RA1 and Methanosarcina barkeri. Appl. Environ. Microbiol. 44:128-134.
19. Nakashimada, Y., K. Srinivasan, M. Murakami, and N. Nishio. 2000. Direct conversion of cellulose to methane by anaerobic fungus Neocallimastix frontalis and defined methanogens. Biotechnol. Lett. 22:223-227.
20. Orpin, C. G. 1975. Studies on the rumen flagellate Neocallimastix frontalis. J. Gen. Microbiol. 91:249-262.
21. O'Fallon, J. V., R. W. Wright, and R. E. Calza. 1991. Glucose metabolic pathways in the anaerobic rumen fungus Neocallimastix frontalis EB188. J. Biochem. 274:595-599.
22. Pham, L. H., J. Vater, W. Rotard, and C. Mugge. 2005. Identification of secondary metabolites from Streptomyces violaceoruber TU22 by means of on-flow LC-NMR and LC-DAD-MS. Magn. Reson. Chem. 43:710-723.
23. Teunissen, M. J., E. P. W. Kets, H. J. M. Op den Camp, J. H. J. Huis in't Veld, and G. D. Vogels. 1992. Effect of coculture of anaerobic fungi isolated from ruminants and non-ruminants with methanogenic bacteria on cellulolytic and xylanolytic enzyme activities. Arch. Microbiol. 157:176-182.
24. Theodorou, M. K., D. R. Davies, and C. G. Orpin. 1995. Nutrition and survival of anaerobic fungi. In: Anaerobic fungi: Biology, Ecology and Function (Ed. D. O. Mountfort and C. G. Oprin). Marcel Dekker, New York, USA. pp. 107-128.
25. Theodorou, M. K., G. Mennim, D. R. Davies, W. Y. Zhu, A. P. Trinci, and J. L. Brookman. 1996. Anaerobic fungi in the digestive tract of mammalian herbivores and their potential for exploitation. Proc. Nutr. Soc. 55:913-926.