메뉴 건너뛰기




Volumn 155, Issue 4, 2013, Pages 858-

XThe landscape of microsatellite instability in colorectal and endometrial cancer genomes

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMATIN STRUCTURE; COLORECTAL CANCER; DNA REPAIR; ENDOMETRIUM CANCER; EPIGENETICS; FRAMESHIFT MUTATION; GENE EXPRESSION; GENE LOCUS; GENE MUTATION; GENE SEQUENCE; GENOME ANALYSIS; HUMAN; HUMAN GENOME; INTRON; MICROSATELLITE INSTABILITY; NUCLEOSOME; POINT MUTATION; PREVALENCE; PRIORITY JOURNAL; SHORT TANDEM REPEAT;

EID: 84887924524     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2013.10.015     Document Type: Article
Times cited : (278)

References (59)
  • 4
    • 77449130761 scopus 로고    scopus 로고
    • Microsatellite instability in colorectal cancer
    • e3
    • C.R. Boland, and A. Goel Microsatellite instability in colorectal cancer Gastroenterology 138 2010 2073 2087 e3
    • (2010) Gastroenterology , vol.138 , pp. 2073-2087
    • Boland, C.R.1    Goel, A.2
  • 6
    • 84858000859 scopus 로고    scopus 로고
    • APRIN is a cell cycle specific BRCA2-interacting protein required for genome integrity and a predictor of outcome after chemotherapy in breast cancer
    • R. Brough, I. Bajrami, R. Vatcheva, R. Natrajan, J.S. Reis-Filho, C.J. Lord, and A. Ashworth APRIN is a cell cycle specific BRCA2-interacting protein required for genome integrity and a predictor of outcome after chemotherapy in breast cancer EMBO J. 31 2012 1160 1176
    • (2012) EMBO J. , vol.31 , pp. 1160-1176
    • Brough, R.1    Bajrami, I.2    Vatcheva, R.3    Natrajan, R.4    Reis-Filho, J.S.5    Lord, C.J.6    Ashworth, A.7
  • 7
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • Cancer Genome Atlas Network
    • Cancer Genome Atlas Network Comprehensive molecular characterization of human colon and rectal cancer Nature 487 2012 330 337
    • (2012) Nature , vol.487 , pp. 330-337
  • 9
    • 34247197937 scopus 로고    scopus 로고
    • The nonsense-mediated decay RNA surveillance pathway
    • Y.F. Chang, J.S. Imam, and M.F. Wilkinson The nonsense-mediated decay RNA surveillance pathway Annu. Rev. Biochem. 76 2007 51 74
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 51-74
    • Chang, Y.F.1    Imam, J.S.2    Wilkinson, M.F.3
  • 10
    • 84856535081 scopus 로고    scopus 로고
    • Mutual exclusivity analysis identifies oncogenic network modules
    • G. Ciriello, E. Cerami, C. Sander, and N. Schultz Mutual exclusivity analysis identifies oncogenic network modules Genome Res. 22 2012 398 406
    • (2012) Genome Res. , vol.22 , pp. 398-406
    • Ciriello, G.1    Cerami, E.2    Sander, C.3    Schultz, N.4
  • 11
    • 77954720070 scopus 로고    scopus 로고
    • Clinical relevance of microsatellite instability in colorectal cancer
    • A. de la Chapelle, and H. Hampel Clinical relevance of microsatellite instability in colorectal cancer J. Clin. Oncol. 28 2010 3380 3387
    • (2010) J. Clin. Oncol. , vol.28 , pp. 3380-3387
    • De La Chapelle, A.1    Hampel, H.2
  • 13
    • 52649157765 scopus 로고    scopus 로고
    • Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
    • J.C. Dohm, C. Lottaz, T. Borodina, and H. Himmelbauer Substantial biases in ultra-short read data sets from high-throughput DNA sequencing Nucleic Acids Res. 36 2008 e105
    • (2008) Nucleic Acids Res. , vol.36 , pp. 105
    • Dohm, J.C.1    Lottaz, C.2    Borodina, T.3    Himmelbauer, H.4
  • 17
    • 63649145255 scopus 로고    scopus 로고
    • AIM2 activates the inflammasome and cell death in response to cytoplasmic DNA
    • T. Fernandes-Alnemri, J.W. Yu, P. Datta, J. Wu, and E.S. Alnemri AIM2 activates the inflammasome and cell death in response to cytoplasmic DNA Nature 458 2009 509 513
    • (2009) Nature , vol.458 , pp. 509-513
    • Fernandes-Alnemri, T.1    Yu, J.W.2    Datta, P.3    Wu, J.4    Alnemri, E.S.5
  • 20
    • 0033556428 scopus 로고    scopus 로고
    • Causes and consequences of microsatellite instability in endometrial carcinoma
    • C.C. Gurin, M.G. Federici, L. Kang, and J. Boyd Causes and consequences of microsatellite instability in endometrial carcinoma Cancer Res. 59 1999 462 466
    • (1999) Cancer Res. , vol.59 , pp. 462-466
    • Gurin, C.C.1    Federici, M.G.2    Kang, L.3    Boyd, J.4
  • 24
    • 33845608798 scopus 로고    scopus 로고
    • Classification of colorectal cancer based on correlation of clinical, morphological and molecular features
    • J.R. Jass Classification of colorectal cancer based on correlation of clinical, morphological and molecular features Histopathology 50 2007 113 130
    • (2007) Histopathology , vol.50 , pp. 113-130
    • Jass, J.R.1
  • 31
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • H. Li, and R. Durbin Fast and accurate short read alignment with Burrows-Wheeler transform Bioinformatics 25 2009 1754 1760
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 34
    • 0033951367 scopus 로고    scopus 로고
    • Selection against frameshift mutations limits microsatellite expansion in coding DNA
    • D. Metzgar, J. Bytof, and C. Wills Selection against frameshift mutations limits microsatellite expansion in coding DNA Genome Res. 10 2000 72 80
    • (2000) Genome Res. , vol.10 , pp. 72-80
    • Metzgar, D.1    Bytof, J.2    Wills, C.3
  • 35
    • 80455126001 scopus 로고    scopus 로고
    • Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems
    • A.E. Minoche, J.C. Dohm, and H. Himmelbauer Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems Genome Biol. 12 2011 R112
    • (2011) Genome Biol. , vol.12 , pp. 112
    • Minoche, A.E.1    Dohm, J.C.2    Himmelbauer, H.3
  • 36
    • 84858226929 scopus 로고    scopus 로고
    • Clinical significance of mitochondrial transcription factor A expression in patients with colorectal cancer
    • Y. Nakayama, M. Yamauchi, N. Minagawa, T. Torigoe, H. Izumi, K. Kohno, and K. Yamaguchi Clinical significance of mitochondrial transcription factor A expression in patients with colorectal cancer Oncol. Rep. 27 2012 1325 1330
    • (2012) Oncol. Rep. , vol.27 , pp. 1325-1330
    • Nakayama, Y.1    Yamauchi, M.2    Minagawa, N.3    Torigoe, T.4    Izumi, H.5    Kohno, K.6    Yamaguchi, K.7
  • 38
    • 0028785603 scopus 로고
    • Microsatellite instability and mutations of the transforming growth factor beta type II receptor gene in colorectal cancer
    • R. Parsons, L.L. Myeroff, B. Liu, J.K. Willson, S.D. Markowitz, K.W. Kinzler, and B. Vogelstein Microsatellite instability and mutations of the transforming growth factor beta type II receptor gene in colorectal cancer Cancer Res. 55 1995 5548 5550
    • (1995) Cancer Res. , vol.55 , pp. 5548-5550
    • Parsons, R.1    Myeroff, L.L.2    Liu, B.3    Willson, J.K.4    Markowitz, S.D.5    Kinzler, K.W.6    Vogelstein, B.7
  • 39
    • 70449580336 scopus 로고    scopus 로고
    • Screening for microsatellite instability identifies frequent 3′-untranslated region mutation of the RB1-inducible coiled-coil 1 gene in colon tumors
    • B.C. Paun, Y. Cheng, B.A. Leggett, J. Young, S.J. Meltzer, and Y. Mori Screening for microsatellite instability identifies frequent 3′-untranslated region mutation of the RB1-inducible coiled-coil 1 gene in colon tumors PLoS ONE 4 2009 e7715
    • (2009) PLoS ONE , vol.4 , pp. 7715
    • Paun, B.C.1    Cheng, Y.2    Leggett, B.A.3    Young, J.4    Meltzer, S.J.5    Mori, Y.6
  • 40
    • 11144357255 scopus 로고    scopus 로고
    • Cellular machineries for chromosomal DNA repair
    • C.L. Peterson, and J. Côté Cellular machineries for chromosomal DNA repair Genes Dev. 18 2004 602 616
    • (2004) Genes Dev. , vol.18 , pp. 602-616
    • Peterson, C.L.1    Côté, J.2
  • 41
    • 84864454608 scopus 로고    scopus 로고
    • Aberrant protein expression and frequent allelic loss of MSH3 in colorectal cancer with low-level microsatellite instability
    • J. Plaschke, M. Preußler, A. Ziegler, and H.K. Schackert Aberrant protein expression and frequent allelic loss of MSH3 in colorectal cancer with low-level microsatellite instability Int. J. Colorectal Dis. 27 2012 911 919
    • (2012) Int. J. Colorectal Dis. , vol.27 , pp. 911-919
    • Plaschke, J.1    Preußler, M.2    Ziegler, A.3    Schackert, H.K.4
  • 44
    • 14544300998 scopus 로고    scopus 로고
    • Systematic review of microsatellite instability and colorectal cancer prognosis
    • S. Popat, R. Hubner, and R.S. Houlston Systematic review of microsatellite instability and colorectal cancer prognosis J. Clin. Oncol. 23 2005 609 618
    • (2005) J. Clin. Oncol. , vol.23 , pp. 609-618
    • Popat, S.1    Hubner, R.2    Houlston, R.S.3
  • 47
    • 0031018674 scopus 로고    scopus 로고
    • Somatic frameshift mutations in the BAX gene in colon cancers of the microsatellite mutator phenotype
    • N. Rampino, H. Yamamoto, Y. Ionov, Y. Li, H. Sawai, J.C. Reed, and M. Perucho Somatic frameshift mutations in the BAX gene in colon cancers of the microsatellite mutator phenotype Science 275 1997 967 969
    • (1997) Science , vol.275 , pp. 967-969
    • Rampino, N.1    Yamamoto, H.2    Ionov, Y.3    Li, Y.4    Sawai, H.5    Reed, J.C.6    Perucho, M.7
  • 48
    • 84865248380 scopus 로고    scopus 로고
    • Chromatin organization is a major influence on regional mutation rates in human cancer cells
    • B. Schuster-Böckler, and B. Lehner Chromatin organization is a major influence on regional mutation rates in human cancer cells Nature 488 2012 504 507
    • (2012) Nature , vol.488 , pp. 504-507
    • Schuster-Böckler, B.1    Lehner, B.2
  • 49
    • 0037268258 scopus 로고    scopus 로고
    • Genome-wide analysis of microsatellite repeats in humans: Their abundance and density in specific genomic regions
    • S. Subramanian, R.K. Mishra, and L. Singh Genome-wide analysis of microsatellite repeats in humans: their abundance and density in specific genomic regions Genome Biol. 4 2003 R13
    • (2003) Genome Biol. , vol.4 , pp. 13
    • Subramanian, S.1    Mishra, R.K.2    Singh, L.3
  • 55
    • 0029131403 scopus 로고
    • Demonstration that mutation of the type II transforming growth factor beta receptor inactivates its tumor suppressor activity in replication error-positive colon carcinoma cells
    • J. Wang, L. Sun, L. Myeroff, X. Wang, L.E. Gentry, J. Yang, J. Liang, E. Zborowska, S. Markowitz, and J.K. Willson Demonstration that mutation of the type II transforming growth factor beta receptor inactivates its tumor suppressor activity in replication error-positive colon carcinoma cells J. Biol. Chem. 270 1995 22044 22049
    • (1995) J. Biol. Chem. , vol.270 , pp. 22044-22049
    • Wang, J.1    Sun, L.2    Myeroff, L.3    Wang, X.4    Gentry, L.E.5    Yang, J.6    Liang, J.7    Zborowska, E.8    Markowitz, S.9    Willson, J.K.10
  • 57
    • 40149094813 scopus 로고    scopus 로고
    • Inhibition of JAK1, 2/STAT3 signaling induces apoptosis, cell cycle arrest, and reduces tumor cell invasion in colorectal cancer cells
    • H. Xiong, Z.G. Zhang, X.Q. Tian, D.F. Sun, Q.C. Liang, Y.J. Zhang, R. Lu, Y.X. Chen, and J.Y. Fang Inhibition of JAK1, 2/STAT3 signaling induces apoptosis, cell cycle arrest, and reduces tumor cell invasion in colorectal cancer cells Neoplasia 10 2008 287 297
    • (2008) Neoplasia , vol.10 , pp. 287-297
    • Xiong, H.1    Zhang, Z.G.2    Tian, X.Q.3    Sun, D.F.4    Liang, Q.C.5    Zhang, Y.J.6    Lu, R.7    Chen, Y.X.8    Fang, J.Y.9
  • 58
    • 70350215709 scopus 로고    scopus 로고
    • An A13 repeat within the 3′-untranslated region of epidermal growth factor receptor (EGFR) is frequently mutated in microsatellite instability colon cancers and is associated with increased EGFR expression
    • Z. Yuan, J. Shin, A. Wilson, S. Goel, Y.H. Ling, N. Ahmed, H. Dopeso, M. Jhawer, S. Nasser, and C. Montagna An A13 repeat within the 3′- untranslated region of epidermal growth factor receptor (EGFR) is frequently mutated in microsatellite instability colon cancers and is associated with increased EGFR expression Cancer Res. 69 2009 7811 7818
    • (2009) Cancer Res. , vol.69 , pp. 7811-7818
    • Yuan, Z.1    Shin, J.2    Wilson, A.3    Goel, S.4    Ling, Y.H.5    Ahmed, N.6    Dopeso, H.7    Jhawer, M.8    Nasser, S.9    Montagna, C.10
  • 59
    • 0030665624 scopus 로고    scopus 로고
    • Allelic profiles of mononucleotide repeat microsatellites in control individuals and in colorectal tumors with and without replication errors
    • X.P. Zhou, J.M. Hoang, P. Cottu, G. Thomas, and R. Hamelin Allelic profiles of mononucleotide repeat microsatellites in control individuals and in colorectal tumors with and without replication errors Oncogene 15 1997 1713 1718
    • (1997) Oncogene , vol.15 , pp. 1713-1718
    • Zhou, X.P.1    Hoang, J.M.2    Cottu, P.3    Thomas, G.4    Hamelin, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.