메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages

PlantTFcat: An online plant transcription factor and transcriptional regulator categorization and analysis tool

Author keywords

Chromatin regulator; High throughput prediction; Plant genome; Transcription factor; Transcriptional regulator

Indexed keywords

BASAL TRANSCRIPTION; CHROMATIN REGULATOR; COMPREHENSIVE PREDICTION; HIGH-THROUGHPUT; PLANT GENOMES; PLANT TRANSCRIPTION FACTORS; REGULATORY MECHANISM; TRANSCRIPTIONAL REGULATOR;

EID: 84887369597     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-14-321     Document Type: Article
Times cited : (122)

References (15)
  • 1
    • 84862224848 scopus 로고    scopus 로고
    • The interaction and integration of auxin signaling components
    • 10.1093/pcp/pcs035, 22433459
    • K-i H. The interaction and integration of auxin signaling components. Plant Cell Physiol 2012, 53(6):965-975. 10.1093/pcp/pcs035, 22433459.
    • (2012) Plant Cell Physiol , vol.53 , Issue.6 , pp. 965-975
    • K-i, H.1
  • 3
    • 34250620427 scopus 로고    scopus 로고
    • The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy
    • Liu Y, Koornneef M, Soppe WJJ. The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy. The Plant Cell Online 2007, 19(2):433-444.
    • (2007) The Plant Cell Online , vol.19 , Issue.2 , pp. 433-444
    • Liu, Y.1    Koornneef, M.2    Soppe, W.J.J.3
  • 5
    • 0035798406 scopus 로고    scopus 로고
    • Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
    • 10.1006/jmbi.2001.5080, 11697912
    • Gough J, Karplus K, Hughey R, Chothia C. Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J Mol Biol 2001, 313(4):903-919. 10.1006/jmbi.2001.5080, 11697912.
    • (2001) J Mol Biol , vol.313 , Issue.4 , pp. 903-919
    • Gough, J.1    Karplus, K.2    Hughey, R.3    Chothia, C.4
  • 6
    • 33644878620 scopus 로고    scopus 로고
    • DBD: a transcription factor prediction database
    • Kummerfeld SK, Teichmann SA. DBD: a transcription factor prediction database. Nucleic Acids Res 2005, 34(suppl 1):D74-D81.
    • (2005) Nucleic Acids Res , vol.34 , Issue.SUPPL. 1
    • Kummerfeld, S.K.1    Teichmann, S.A.2
  • 9
    • 84862221167 scopus 로고    scopus 로고
    • SMART 7: recent updates to the protein domain annotation resource
    • 10.1093/nar/gkr931, 3245027, 22053084
    • Letunic I, Doerks T, Bork P. SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res 2012, 40(D1):D302-D305. 10.1093/nar/gkr931, 3245027, 22053084.
    • (2012) Nucleic Acids Res , vol.40 , Issue.D1
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 11
    • 48849102375 scopus 로고    scopus 로고
    • A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula
    • 10.1186/1746-4811-4-18, 2490690, 18611268
    • Kakar K, Wandrey M, Czechowski T, Gaertner T, Scheible W-R, Stitt M, Torres-Jerez I, Xiao Y, Redman J, Wu H, et al. A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula. Plant Methods 2008, 4(1):18. 10.1186/1746-4811-4-18, 2490690, 18611268.
    • (2008) Plant Methods , vol.4 , Issue.1 , pp. 18
    • Kakar, K.1    Wandrey, M.2    Czechowski, T.3    Gaertner, T.4    Scheible, W.-R.5    Stitt, M.6    Torres-Jerez, I.7    Xiao, Y.8    Redman, J.9    Wu, H.10
  • 12
    • 77649328902 scopus 로고    scopus 로고
    • SoyDB: a knowledge database of soybean transcription factors
    • 10.1186/1471-2229-10-14, 2826334, 20082720
    • Wang Z, Libault M, Joshi T, Valliyodan B, Nguyen H, Xu D, Stacey G, Cheng J. SoyDB: a knowledge database of soybean transcription factors. BMC Plant Biol 2010, 10(1):14. 10.1186/1471-2229-10-14, 2826334, 20082720.
    • (2010) BMC Plant Biol , vol.10 , Issue.1 , pp. 14
    • Wang, Z.1    Libault, M.2    Joshi, T.3    Valliyodan, B.4    Nguyen, H.5    Xu, D.6    Stacey, G.7    Cheng, J.8
  • 13
    • 0029099016 scopus 로고
    • The BTB/POZ domain: a new protein-protein interaction motif common to DNA- and actin-binding proteins
    • Albagli O, Dhordain P, Deweindt C, Lecocq G, Leprince D. The BTB/POZ domain: a new protein-protein interaction motif common to DNA- and actin-binding proteins. Cell Growth Differ 1995, 6(9):1193-1198.
    • (1995) Cell Growth Differ , vol.6 , Issue.9 , pp. 1193-1198
    • Albagli, O.1    Dhordain, P.2    Deweindt, C.3    Lecocq, G.4    Leprince, D.5
  • 14
    • 70350446825 scopus 로고    scopus 로고
    • Arabidopsis thaliana BTB/ POZ-MATH proteins interact with members of the ERF/AP2 transcription factor family
    • 10.1111/j.1742-4658.2009.07373.x, 19843165
    • Weber H, Hellmann H. Arabidopsis thaliana BTB/ POZ-MATH proteins interact with members of the ERF/AP2 transcription factor family. FEBS J 2009, 276(22):6624-6635. 10.1111/j.1742-4658.2009.07373.x, 19843165.
    • (2009) FEBS J , vol.276 , Issue.22 , pp. 6624-6635
    • Weber, H.1    Hellmann, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.