-
1
-
-
82755174118
-
Addressing scientific fraud
-
Crocker J, Cooper ML, (2011) Addressing scientific fraud. Science 334: 1182.
-
(2011)
Science
, vol.334
, pp. 1182
-
-
Crocker, J.1
Cooper, M.L.2
-
2
-
-
84856197539
-
Data replication & reproducibility. Again, and again, and again. Introduction
-
Jasny BR, Chin G, Chong L, Vignieri S, (2011) Data replication & reproducibility. Again, and again, and again. Introduction. Science 334: 1225.
-
(2011)
Science
, vol.334
, pp. 1225
-
-
Jasny, B.R.1
Chin, G.2
Chong, L.3
Vignieri, S.4
-
3
-
-
82755174123
-
Reproducible research in computational science
-
Peng RD, (2011) Reproducible research in computational science. Science 334: 1226-1227.
-
(2011)
Science
, vol.334
, pp. 1226-1227
-
-
Peng, R.D.1
-
4
-
-
75649122581
-
Computer science. Accessible reproducible research
-
Mesirov JP, (2010) Computer science. Accessible reproducible research. Science 327: 415-416.
-
(2010)
Science
, vol.327
, pp. 415-416
-
-
Mesirov, J.P.1
-
5
-
-
84865226981
-
Next-generation sequencing data interpretation: enhancing reproducibility and accessibility
-
Nekrutenko A, Taylor J, (2012) Next-generation sequencing data interpretation: enhancing reproducibility and accessibility. Nat Rev Genet 13: 667-672.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 667-672
-
-
Nekrutenko, A.1
Taylor, J.2
-
6
-
-
59149088407
-
Repeatability of published microarray gene expression analyses
-
Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, et al. (2009) Repeatability of published microarray gene expression analyses. Nat Genet 41: 149-155.
-
(2009)
Nat Genet
, vol.41
, pp. 149-155
-
-
Ioannidis, J.P.1
Allison, D.B.2
Ball, C.A.3
Coulibaly, I.4
Cui, X.5
-
7
-
-
79953329158
-
Retractions in the scientific literature: is the incidence of research fraud increasing?
-
Steen RG, (2011) Retractions in the scientific literature: is the incidence of research fraud increasing? J Med Ethics 37: 249-253.
-
(2011)
J Med Ethics
, vol.37
, pp. 249-253
-
-
Steen, R.G.1
-
8
-
-
80055088241
-
Believe it or not: how much can we rely on published data on potential drug targets?
-
Prinz F, Schlange T, Asadullah K, (2011) Believe it or not: how much can we rely on published data on potential drug targets? Nat Rev Drug Discov 10: 712.
-
(2011)
Nat Rev Drug Discov
, vol.10
, pp. 712
-
-
Prinz, F.1
Schlange, T.2
Asadullah, K.3
-
9
-
-
84859169880
-
Drug development: raise standards for preclinical cancer research
-
Begley CG, Ellis LM, (2012) Drug development: raise standards for preclinical cancer research. Nature 483: 531-533.
-
(2012)
Nature
, vol.483
, pp. 531-533
-
-
Begley, C.G.1
Ellis, L.M.2
-
10
-
-
33646361583
-
GenePattern 2.0
-
Reich M, Liefeld T, Gould J, Lerner J, Tamayo P, et al. (2006) GenePattern 2.0. Nat Genet 38: 500-501.
-
(2006)
Nat Genet
, vol.38
, pp. 500-501
-
-
Reich, M.1
Liefeld, T.2
Gould, J.3
Lerner, J.4
Tamayo, P.5
-
11
-
-
25844449770
-
Galaxy: a platform for interactive large-scale genome analysis
-
Giardine B, Riemer C, Hardison RC, Burhans R, Elnitski L, et al. (2005) Galaxy: a platform for interactive large-scale genome analysis. Genome Res 15: 1451-1455.
-
(2005)
Genome Res
, vol.15
, pp. 1451-1455
-
-
Giardine, B.1
Riemer, C.2
Hardison, R.C.3
Burhans, R.4
Elnitski, L.5
-
12
-
-
0042745638
-
The LONI Pipeline Processing Environment
-
Rex DE, Ma JQ, Toga AW, (2003) The LONI Pipeline Processing Environment. Neuroimage 19: 1033-1048.
-
(2003)
Neuroimage
, vol.19
, pp. 1033-1048
-
-
Rex, D.E.1
Ma, J.Q.2
Toga, A.W.3
-
13
-
-
10244255212
-
Taverna: a tool for the composition and enactment of bioinformatics workflows
-
Oinn T, Addis M, Ferris J, Marvin D, Senger M, et al. (2004) Taverna: a tool for the composition and enactment of bioinformatics workflows. Bioinformatics 20: 3045-3054.
-
(2004)
Bioinformatics
, vol.20
, pp. 3045-3054
-
-
Oinn, T.1
Addis, M.2
Ferris, J.3
Marvin, D.4
Senger, M.5
-
14
-
-
36248970413
-
Sharing detailed research data is associated with increased citation rate
-
doi:10.1371/journal.pone.0000308
-
Piwowar HA, Day RS, Fridsma DB, (2007) Sharing detailed research data is associated with increased citation rate. PLoS ONE 2: e308 doi:10.1371/journal.pone.0000308.
-
(2007)
PLoS ONE
, vol.2
-
-
Piwowar, H.A.1
Day, R.S.2
Fridsma, D.B.3
-
17
-
-
77954275246
-
myExperiment: a repository and social network for the sharing of bioinformatics workflows
-
Goble CA, Bhagat J, Aleksejevs S, Cruickshank D, Michaelides D, et al. (2010) myExperiment: a repository and social network for the sharing of bioinformatics workflows. Nucleic Acids Res 38: W677-682.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Goble, C.A.1
Bhagat, J.2
Aleksejevs, S.3
Cruickshank, D.4
Michaelides, D.5
-
18
-
-
29644434815
-
Pegasus: a framework for mapping complex scientific workflows onto distributed systems
-
Deelman E, Singh G, Su M-H, Blythe J, Gil Y, et al. (2005) Pegasus: a framework for mapping complex scientific workflows onto distributed systems. Scientific Programming Journal 13: 219-237.
-
(2005)
Scientific Programming Journal
, vol.13
, pp. 219-237
-
-
Deelman, E.1
Singh, G.2
Su, M.-H.3
Blythe, J.4
Gil, Y.5
-
19
-
-
0242529706
-
Sweave: dynamic generation of statistical reports using literate data analysis
-
In: Härdle W, Rönz B, editors. Heidelberg, Germany: Physika Verlag
-
Leisch F (2002) Sweave: dynamic generation of statistical reports using literate data analysis. In: Härdle W, Rönz B, editors. Compstat: proceedings in computational statistics. Heidelberg, Germany: Physika Verlag. pp. 575-580.
-
(2002)
Compstat: Proceedings in computational statistics
, pp. 575-580
-
-
Leisch, F.1
-
20
-
-
77955801615
-
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Goecks J, Nekrutenko A, Taylor J, (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 11: R86.
-
(2010)
Genome Biol
, vol.11
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
-
21
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
-
Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, et al. (2001) Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet 29: 365-371.
-
(2001)
Nat Genet
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
-
22
-
-
0037246058
-
ArrayExpress-a public repository for microarray gene expression data at the EBI
-
Brazma A, Parkinson H, Sarkans U, Shojatalab M, Vilo J, et al. (2003) ArrayExpress-a public repository for microarray gene expression data at the EBI. Nucleic Acids Res 31: 68-71.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 68-71
-
-
Brazma, A.1
Parkinson, H.2
Sarkans, U.3
Shojatalab, M.4
Vilo, J.5
-
23
-
-
0036081355
-
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
-
Edgar R, Domrachev M, Lash AE, (2002) Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 30: 207-210.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
-
24
-
-
84891658571
-
GigaDB: announcing the GigaScience database
-
Sneddon TP, Li P, Edmunds SC, (2012) GigaDB: announcing the GigaScience database. Gigascience 1: 11.
-
(2012)
Gigascience
, vol.1
, pp. 11
-
-
Sneddon, T.P.1
Li, P.2
Edmunds, S.C.3
-
25
-
-
84872007657
-
Ten simple rules for the open development of scientific software
-
doi:10.1371/journal.pcbi.1002802
-
Prlić A, Procter JB, (2012) Ten simple rules for the open development of scientific software. PLoS Comput Biol 8: e1002802 doi:10.1371/journal.pcbi.1002802.
-
(2012)
PLoS Comput Biol
, vol.8
-
-
Prlić, A.1
Procter, J.B.2
|