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Volumn 5, Issue 5, 2013, Pages 223-232

Using harmony clustering for haplotype reconstruction from SNP fragments

Author keywords

Bioinformatics; Clustering; Evolutionary optimization; Reconstruction rate

Indexed keywords


EID: 84887070366     PISSN: 22337849     EISSN: None     Source Type: Journal    
DOI: 10.14257/ijbsbt.2013.5.5.23     Document Type: Article
Times cited : (2)

References (21)
  • 1
    • 34447639878 scopus 로고    scopus 로고
    • Minimum conflict individual Haplotyping from SNP fragments and related Genotype
    • X. Zhang, R. Wang, L. Wu and W. Zhang, "Minimum conflict individual Haplotyping from SNP fragments and related Genotype", Bioinformatics Oxford Journal, (2006), pp. 271-280.
    • (2006) Bioinformatics Oxford Journal , pp. 271-280
    • Zhang, X.1    Wang, R.2    Wu, L.3    Zhang, W.4
  • 2
    • 34047143242 scopus 로고    scopus 로고
    • A clustering algorithm based on two distance functions for MEC model
    • Y. Wang, E. Feng and R. Wang, "A clustering algorithm based on two distance functions for MEC model", Computational Biology and Chemistry, vol. 31, no. 2, (2007), pp. 148-150.
    • (2007) Computational Biology and Chemistry , vol.31 , Issue.2 , pp. 148-150
    • Wang, Y.1    Feng, E.2    Wang, R.3
  • 3
    • 19544369865 scopus 로고    scopus 로고
    • Haplotype reconstruction from SNP fragments by Minimum Error Correction
    • R.-S. Wang, L.-Y. Wu, Z.-P. Li and X.-S. Zhang, "Haplotype reconstruction from SNP fragments by Minimum Error Correction", Bioinformatics, vol. 21, no. 10, (2005), pp. 2456-2462.
    • (2005) Bioinformatics , vol.21 , Issue.10 , pp. 2456-2462
    • Wang, R.-S.1    Wu, L.-Y.2    Li, Z.-P.3    Zhang, X.-S.4
  • 4
    • 0035895505 scopus 로고    scopus 로고
    • The sequence of the human genome
    • J. C. Venter and M. D. Adams, "The sequence of the human genome", Science, vol. 291, no. 5507, (2001), pp. 1304-1351.
    • (2001) Science , vol.291 , pp. 1304-1351
    • Venter, J.C.1    Adams, M.D.2
  • 5
    • 0032403973 scopus 로고    scopus 로고
    • Linkage disquilibrium mapping of complex disease: Fantasy and reality?
    • J. Terwilliger and K. Weiss, "Linkage disquilibrium mapping of complex disease: Fantasy and reality?", Current Opinion in Biotechnology, vol. 9, no. 6, (1998), pp. 578-594.
    • (1998) Current Opinion in Biotechnology , vol.9 , Issue.6 , pp. 578-594
    • Terwilliger, J.1    Weiss, K.2
  • 6
    • 38049071463 scopus 로고    scopus 로고
    • Particle swarm optimization for SNP haplotype reconstruction problem
    • W. Qian, Y. Yang, N. Yang and C. Li, "Particle swarm optimization for SNP haplotype reconstruction problem", Applied Mathematics and Computation, vol. 196, (2007), pp. 266-272.
    • (2007) Applied Mathematics and Computation , vol.196 , pp. 266-272
    • Qian, W.1    Yang, Y.2    Yang, N.3    Li, C.4
  • 7
    • 35048834697 scopus 로고    scopus 로고
    • Fast Hare: A Fast Heuristic for Single Individual SNP Haplotype Reconstruction
    • M. Sozio Panconesi, "Fast Hare: A Fast Heuristic for Single Individual SNP Haplotype Reconstruction", Algorithms in Bioinformatics, (2004), pp. 266-277.
    • (2004) Algorithms in Bioinformatics , pp. 266-277
    • Sozio Panconesi, M.1
  • 10
    • 34248141625 scopus 로고    scopus 로고
    • An improved harmony search algorithm for solving optimization problems
    • M. Mahdavi, M. Fesanghary and E. Damangir, "An improved harmony search algorithm for solving optimization problems", Applied Mathematics and Computation, vol. 188, no. 2, (2007), pp. 1567-1579.
    • (2007) Applied Mathematics and Computation , vol.188 , Issue.2 , pp. 1567-1579
    • Mahdavi, M.1    Fesanghary, M.2    Damangir, E.3
  • 11
    • 20444466485 scopus 로고    scopus 로고
    • A new meta-heuristic algorithm for continues engineering optimization: Harmony search theory and practice
    • K. S. Lee and Z. W. Geem, "A new meta-heuristic algorithm for continues engineering optimization: harmony search theory and practice", Computer Methods in Applied Mechanics and Engineering, vol. 194, (2005), pp. 3902-3933.
    • (2005) Computer Methods in Applied Mechanics and Engineering , vol.194 , pp. 3902-3933
    • Lee, K.S.1    Geem, Z.W.2
  • 12
    • 4544326903 scopus 로고    scopus 로고
    • Opportunities for Combinatorial Optimization in Computational Biology
    • H. J. Greenberg, W. E. Hart and G. Lancia, "Opportunities for Combinatorial Optimization in Computational Biology", INFORMS Journal on Computing, vol. 16, no. 3, (2004), pp. 211-231.
    • (2004) INFORMS Journal on Computing , vol.16 , Issue.3 , pp. 211-231
    • Greenberg, H.J.1    Hart, W.E.2    Lancia, G.3
  • 14
    • 26844499583 scopus 로고    scopus 로고
    • Harmony search for generalized orienteering problem: Best touring in China
    • Z. W. Geem, C. Tseng and Y. Park, "Harmony search for generalized orienteering problem: best touring in China", Lect Notes Comput Sci, (2005), pp. 741-750.
    • (2005) Lect Notes Comput Sci , pp. 741-750
    • Geem, Z.W.1    Tseng, C.2    Park, Y.3
  • 15
    • 0034351369 scopus 로고    scopus 로고
    • Constraint-Handling using an Evolutionary Multi-objective Optimization Technique
    • C. A. C. Coello, "Constraint-Handling using an Evolutionary Multi-objective Optimization Technique", Civil Engineering and Environmental Systems, vol. 17, (2000), pp. 319-346.
    • (2000) Civil Engineering and Environmental Systems , vol.17 , pp. 319-346
    • Coello, C.A.C.1
  • 16
    • 0031834225 scopus 로고    scopus 로고
    • It's raining SNPs, hallelujah?
    • Chakravarti, "It's raining SNPs, hallelujah?", Nature Genetics, vol. 19, (1998), pp. 216-217.
    • (1998) Nature Genetics , vol.19 , pp. 216-217
    • Chakravarti1
  • 17
    • 0348226177 scopus 로고    scopus 로고
    • The Haplotyping problem: An overview of computational models and solutions
    • P. Bonizzoni, G. D. Vedova, R. Dondi and J. Li, "The Haplotyping problem: An overview of computational models and solutions", Journal of Computer Science and Technology, vol. 18, no. 6, (2003), pp. 675-688.
    • (2003) Journal of Computer Science and Technology , vol.18 , Issue.6 , pp. 675-688
    • Bonizzoni, P.1    Vedova, G.D.2    Dondi, R.3    Li, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.