Incorporating substrate sequence motifs and spatial amino acid composition to identify kinase-specific phosphorylation sites on protein three-dimensional structures

BMC Bioinformatics

Volumn 14, Issue SUPPL16, 2013, Pages

  Su, Min Gang ^a   Lee, Tzong Yi ^a  

^a YUAN ZE UNIVERSITY   (Taiwan)

Author keywords

Phosphorylation; Protein kinase; Spatial amino acid composition; Three dimensional structure

Indexed keywords

AMINO ACID COMPOSITIONS; LARGE-SCALE PREDICTION; PHOSPHORYLATED AMINO ACID; PROTEIN KINASE; PROTEIN PHOSPHORYLATION; SUPPORT VECTOR MACHINE (SVMS); THREE DIMENSIONAL (3D) STRUCTURES; THREE-DIMENSIONAL STRUCTURE;

AMINO ACIDS; ENZYMES; MASS SPECTROMETRY; PROTEINS; SUPPORT VECTOR MACHINES; THREE DIMENSIONAL;

PHOSPHORYLATION;

AMINO ACID; PHOSPHOTRANSFERASE; PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; INTERNET; METABOLISM; PHOSPHORYLATION; PROTEIN DATABASE; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; SUPPORT VECTOR MACHINE;

AMINO ACID SEQUENCE; AMINO ACIDS; DATABASES, PROTEIN; INTERNET; MODELS, MOLECULAR; PHOSPHORYLATION; PHOSPHOTRANSFERASES; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; PROTEINS; SUPPORT VECTOR MACHINES;

EID: 84886797832     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-14-S16-S2     Document Type: Article

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