-
1
-
-
0023449962
-
Spin glasses and the statistical mechanics of protein folding
-
Bryngelson, J. D.; Wolynes, P. G. Spin glasses and the statistical mechanics of protein folding Proc. Natl. Acad. Sci. U. S. A. 1987, 84, 7524-7528
-
(1987)
Proc. Natl. Acad. Sci. U. S. A.
, vol.84
, pp. 7524-7528
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
2
-
-
0024733407
-
Intermediates and barrier crossing in a random energy model (with applications to protein folding)
-
Bryngelson, J. D.; Wolynes, P. G. Intermediates and barrier crossing in a random energy model (with applications to protein folding) J. Phys. Chem. 1989, 93, 6902-6915
-
(1989)
J. Phys. Chem.
, vol.93
, pp. 6902-6915
-
-
Bryngelson, J.D.1
Wolynes, P.G.2
-
3
-
-
0028947257
-
Funnels, Pathways, and the Energy Landscape of Protein-Folding - A Synthesis
-
Bryngelson, J.; Onuchic, J.; Socci, N.; Wolynes, P. Funnels, Pathways, and the Energy Landscape of Protein-Folding-A Synthesis Proteins: Struct., Funct., Genet. 1995, 21, 167-195
-
(1995)
Proteins: Struct., Funct., Genet.
, vol.21
, pp. 167-195
-
-
Bryngelson, J.1
Onuchic, J.2
Socci, N.3
Wolynes, P.4
-
4
-
-
0027318781
-
Kinetics and Thermodynamics of Folding in Model Proteins
-
Camacho, C. J.; Thirumalai, D. Kinetics and Thermodynamics of Folding in Model Proteins Proc. Natl. Acad. Sci. U. S. A. 1993, 90, 6369-6372
-
(1993)
Proc. Natl. Acad. Sci. U. S. A.
, vol.90
, pp. 6369-6372
-
-
Camacho, C.J.1
Thirumalai, D.2
-
5
-
-
84867048390
-
Polymer Scaling Laws of Unfolded and Intrinsically Disordered Proteins Quantified with Single-Molecule Spectroscopy
-
Hofmann, H. Polymer Scaling Laws of Unfolded and Intrinsically Disordered Proteins Quantified with Single-Molecule Spectroscopy Proc. Natl. Acad. Sci. U. S. A. 2012, 109, 16155-16160
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 16155-16160
-
-
Hofmann, H.1
-
6
-
-
84868152768
-
Chemical physics of protein folding
-
Wolynes, P. G.; Eaton, W. A.; Fersht, A. R. Chemical physics of protein folding Proc. Natl. Acad. Sci. U. S. A. 2012, 109, 17770-17771
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 17770-17771
-
-
Wolynes, P.G.1
Eaton, W.A.2
Fersht, A.R.3
-
7
-
-
77952931294
-
Theoretical perspectives on protein folding
-
Thirumalai, D.; O'Brien, E. P.; Morrison, G.; Hyeon, C. Theoretical perspectives on protein folding Annu. Rev. Biophys. 2010, 39, 159-183
-
(2010)
Annu. Rev. Biophys.
, vol.39
, pp. 159-183
-
-
Thirumalai, D.1
O'Brien, E.P.2
Morrison, G.3
Hyeon, C.4
-
8
-
-
0033515436
-
Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity
-
Betancourt, M. R.; Thirumalai, D. Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity J. Mol. Biol. 1999, 287, 627-644
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 627-644
-
-
Betancourt, M.R.1
Thirumalai, D.2
-
9
-
-
0043238073
-
Effects of Confinement in Chaperonin Assisted Protein Folding: Rate Enhancement by Decreasing the Roughness of the Folding Energy Landscape
-
Baumketner, A.; Jewett, A.; Shea, J. Effects of Confinement in Chaperonin Assisted Protein Folding: Rate Enhancement by Decreasing the Roughness of the Folding Energy Landscape J. Mol. Biol. 2003, 332, 701-713
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 701-713
-
-
Baumketner, A.1
Jewett, A.2
Shea, J.3
-
10
-
-
4444330162
-
Accelerated Folding in the Weak Hydrophobic Environment of a Chaperonin Cavity: Creation of an Alternate Fast Folding Pathway
-
Jewett, A.; Baumketner, A.; Shea, J. Accelerated Folding in the Weak Hydrophobic Environment of a Chaperonin Cavity: Creation of an Alternate Fast Folding Pathway Proc. Natl. Acad. Sci. U. S. A. 2004, 101, 13192-13197
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 13192-13197
-
-
Jewett, A.1
Baumketner, A.2
Shea, J.3
-
11
-
-
33847777945
-
Dynamics of Allosteric Transition in GroEL
-
Hyeon, C.; Lorimer, G. H.; Thirumalai, D. Dynamics of Allosteric Transition in GroEL Proc. Natl. Acad. Sci. U. S. A. 2006, 103, 18939-18944
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 18939-18944
-
-
Hyeon, C.1
Lorimer, G.H.2
Thirumalai, D.3
-
12
-
-
33847770916
-
Internal strain regulates the nucleotide binding site of the kinesin leading head
-
Hyeon, C.; Onuchic, J. N. Internal strain regulates the nucleotide binding site of the kinesin leading head Proc. Natl. Acad. Sci. U. S. A. 2007, 104, 2175-2180
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 2175-2180
-
-
Hyeon, C.1
Onuchic, J.N.2
-
13
-
-
36849010909
-
Mechanical control of the directional stepping dynamics of the kinesin motor
-
Hyeon, C.; Onuchic, J. N. Mechanical control of the directional stepping dynamics of the kinesin motor Proc. Natl. Acad. Sci. U. S. A. 2007, 104, 17382-17387
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 17382-17387
-
-
Hyeon, C.1
Onuchic, J.N.2
-
14
-
-
77951642717
-
Rigor to Post-Rigor Transition in Myosin V: Link between the Dynamics and the Supporting Architecture
-
Tehver, R.; Thirumalai, D. Rigor to Post-Rigor Transition in Myosin V: Link between the Dynamics and the Supporting Architecture Structure 2010, 18, 471-481
-
(2010)
Structure
, vol.18
, pp. 471-481
-
-
Tehver, R.1
Thirumalai, D.2
-
15
-
-
33645770731
-
Folding-based molecular simulations reveal mechanisms of the rotary motor f1-atpase
-
Koga, N.; Takada, S. Folding-based molecular simulations reveal mechanisms of the rotary motor f1-atpase Proc. Natl. Acad. Sci. U. S. A. 2006, 103, 5367-5372
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 5367-5372
-
-
Koga, N.1
Takada, S.2
-
16
-
-
84859417131
-
Dissecting the Kinematics of the Kinesin Step
-
Zhang, Z.; Thirumalai, D. Dissecting the Kinematics of the Kinesin Step Structure 2012, 20, 628-640
-
(2012)
Structure
, vol.20
, pp. 628-640
-
-
Zhang, Z.1
Thirumalai, D.2
-
17
-
-
41049090929
-
Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences
-
Zhou, H. X.; Rivas, G.; Minton, A. P. Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences Annu. Rev. Biophys. 2008, 37, 375-397
-
(2008)
Annu. Rev. Biophys.
, vol.37
, pp. 375-397
-
-
Zhou, H.X.1
Rivas, G.2
Minton, A.P.3
-
18
-
-
44949181944
-
Effects of Trimethylamine N-Oxide (TMAO) and Crowding Agents on the Stability of RNA Hairpins
-
Pincus, D.; Hyeon, C.; Thirumalai, D. Effects of Trimethylamine N-Oxide (TMAO) and Crowding Agents on the Stability of RNA Hairpins J. Am. Chem. Soc. 2008, 130, 7364-7372
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 7364-7372
-
-
Pincus, D.1
Hyeon, C.2
Thirumalai, D.3
-
19
-
-
79961136147
-
Crowding Promotes the Switch from Hairpin to Pseudoknot Conformation in Human Telomerase RNA
-
Denesyuk, N. A.; Thirumalai, D. Crowding Promotes the Switch from Hairpin to Pseudoknot Conformation in Human Telomerase RNA J. Am. Chem. Soc. 2011, 133, 11858-11861
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 11858-11861
-
-
Denesyuk, N.A.1
Thirumalai, D.2
-
20
-
-
77953900637
-
Molecular Crowding Stabilizes Folded RNA Structure by the Excluded Volume Effect
-
Kilburn, D.; Roh, J. H.; Guo, L.; Briber, R.; Woodson, S. A. Molecular Crowding Stabilizes Folded RNA Structure by the Excluded Volume Effect J. Am. Chem. Soc. 2010, 132, 8690-8696
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 8690-8696
-
-
Kilburn, D.1
Roh, J.H.2
Guo, L.3
Briber, R.4
Woodson, S.A.5
-
21
-
-
84985735713
-
Excluded volume as a determinant of macromolecular structure and reactivity
-
Minton, A. Excluded volume as a determinant of macromolecular structure and reactivity Biopolymers 1981, 20, 2093-2120
-
(1981)
Biopolymers
, vol.20
, pp. 2093-2120
-
-
Minton, A.1
-
22
-
-
0019883893
-
Effect of macromolecular crowding upon the structure and function of an enzyme - Glyceraldehyde-3-phosphate dehydrogenase
-
Minton, A. P.; Wilf, J. Effect of macromolecular crowding upon the structure and function of an enzyme-glyceraldehyde-3-phosphate dehydrogenase Biochemistry 1981, 20, 4821-4826
-
(1981)
Biochemistry
, vol.20
, pp. 4821-4826
-
-
Minton, A.P.1
Wilf, J.2
-
23
-
-
0039736332
-
Isolated polymer molecule in a random environment
-
Thirumalai, D. Isolated polymer molecule in a random environment Phys. Rev. A: Gen. Phys. 1988, 37, 269-276
-
(1988)
Phys. Rev. A: Gen. Phys.
, vol.37
, pp. 269-276
-
-
Thirumalai, D.1
-
24
-
-
0027318513
-
Macromolecular crowding - Biochemical, biophysical, and physiological consequences
-
Zimmerman, S. B.; Minton, A. P. Macromolecular crowding-biochemical, biophysical, and physiological consequences Annu. Rev. Biophys. Biomol. Struct. 1993, 22, 27-65
-
(1993)
Annu. Rev. Biophys. Biomol. Struct.
, vol.22
, pp. 27-65
-
-
Zimmerman, S.B.1
Minton, A.P.2
-
25
-
-
0030605841
-
Macromolecular crowding and the mandatory condensation of DNA in bacteria
-
Zimmerman, S. B.; Murphy, L. D. Macromolecular crowding and the mandatory condensation of DNA in bacteria FEBS Lett. 1996, 390, 245-248
-
(1996)
FEBS Lett.
, vol.390
, pp. 245-248
-
-
Zimmerman, S.B.1
Murphy, L.D.2
-
26
-
-
0033039815
-
Folding and unfolding of a giant duplex-DNA in a mixed solution with polycations, polyanions and crowding neutral polymers
-
Kidoaki, S.; Yoshikawa, K. Folding and unfolding of a giant duplex-DNA in a mixed solution with polycations, polyanions and crowding neutral polymers Biophys. Chem. 1999, 76, 133-143
-
(1999)
Biophys. Chem.
, vol.76
, pp. 133-143
-
-
Kidoaki, S.1
Yoshikawa, K.2
-
27
-
-
0037470574
-
Effect of dextran on protein stability and conformation attributed to macromolecular crowding
-
Sasahara, K.; McPhie, P.; Minton, A. P. Effect of dextran on protein stability and conformation attributed to macromolecular crowding J. Mol. Biol. 2003, 326, 1227-1237
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 1227-1237
-
-
Sasahara, K.1
McPhie, P.2
Minton, A.P.3
-
28
-
-
16344364032
-
Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited
-
Minton, A. P. Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited Biophys. J. 2005, 88, 971-985
-
(2005)
Biophys. J.
, vol.88
, pp. 971-985
-
-
Minton, A.P.1
-
29
-
-
16344389134
-
Molecular crowding enhances native state stability and refolding rates of globular proteins
-
Cheung, M. S.; Klimov, D.; Thirumalai, D. Molecular crowding enhances native state stability and refolding rates of globular proteins Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 4753-4758
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 4753-4758
-
-
Cheung, M.S.1
Klimov, D.2
Thirumalai, D.3
-
30
-
-
34547507851
-
Effects of crowding and confinement on the structures of the transition state ensemble in proteins
-
Cheung, M. S.; Thirumalai, D. Effects of crowding and confinement on the structures of the transition state ensemble in proteins J. Phys. Chem. B 2007, 111, 8250-8257
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 8250-8257
-
-
Cheung, M.S.1
Thirumalai, D.2
-
31
-
-
37649016316
-
Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin
-
Stagg, L.; Zhang, S. Q.; Cheung, M. S.; Wittung-Stafshede, P. Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin Proc. Natl. Acad. Sci. U. S. A. 2007, 104, 18976-18981
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 18976-18981
-
-
Stagg, L.1
Zhang, S.Q.2
Cheung, M.S.3
Wittung-Stafshede, P.4
-
32
-
-
50149092143
-
Crowded, cell-like environment induces shape changes in aspherical protein
-
Homouz, D.; Perham, M.; Samiotakis, A.; Cheung, M. S.; Wittung-Stafshede, P. Crowded, cell-like environment induces shape changes in aspherical protein Proc. Natl. Acad. Sci. U. S. A. 2008, 105, 11754-11759
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 11754-11759
-
-
Homouz, D.1
Perham, M.2
Samiotakis, A.3
Cheung, M.S.4
Wittung-Stafshede, P.5
-
33
-
-
77049106311
-
Dependence of Protein Folding Stability and Dynamics on the Density and Composition of Macromolecular Crowders
-
Mittal, J.; Best, R. Dependence of Protein Folding Stability and Dynamics on the Density and Composition of Macromolecular Crowders Biophys. J. 2010, 98, 315-320
-
(2010)
Biophys. J.
, vol.98
, pp. 315-320
-
-
Mittal, J.1
Best, R.2
-
34
-
-
33645999511
-
On interaction between two bodies immersed in a solution of macromolecules
-
Asakura, S.; Oosawa, F. On interaction between two bodies immersed in a solution of macromolecules J. Chem. Phys. 1954, 22, 1255-1256
-
(1954)
J. Chem. Phys.
, vol.22
, pp. 1255-1256
-
-
Asakura, S.1
Oosawa, F.2
-
35
-
-
0000303810
-
Interaction between particles suspended in solutions of macromolecules
-
Asakura, S.; Oosawa, F. Interaction between particles suspended in solutions of macromolecules J. Polym. Sci. 1958, 33, 183-192
-
(1958)
J. Polym. Sci.
, vol.33
, pp. 183-192
-
-
Asakura, S.1
Oosawa, F.2
-
36
-
-
84942297559
-
Polymers at interfaces and interactions in colloidal dispersions
-
Vrij, A. Polymers at interfaces and interactions in colloidal dispersions Pure Appl. Chem. 1976, 48, 471-483
-
(1976)
Pure Appl. Chem.
, vol.48
, pp. 471-483
-
-
Vrij, A.1
-
37
-
-
0000364864
-
Entropic colloidal interactions in concentrated DNA solutions
-
Verma, R.; Crocker, J.; Lubensky, T.; Yodh, A. Entropic colloidal interactions in concentrated DNA solutions Phys. Rev. Lett. 1998, 81, 4004-4007
-
(1998)
Phys. Rev. Lett.
, vol.81
, pp. 4004-4007
-
-
Verma, R.1
Crocker, J.2
Lubensky, T.3
Yodh, A.4
-
38
-
-
3042881063
-
Melting transition of low-molecular-weight DNA - Theory and experiment
-
Crothers, D. M.; Kallenbach, N. R.; Zimm, B. H. Melting transition of low-molecular-weight DNA-theory and experiment J. Mol. Biol. 1965, 11, 802
-
(1965)
J. Mol. Biol.
, vol.11
, pp. 802
-
-
Crothers, D.M.1
Kallenbach, N.R.2
Zimm, B.H.3
-
39
-
-
84904537084
-
Phase transition of a molecular zipper
-
Kittel, C. Phase transition of a molecular zipper Am. J. Phys. 1969, 37, 917-920
-
(1969)
Am. J. Phys.
, vol.37
, pp. 917-920
-
-
Kittel, C.1
-
40
-
-
0017587485
-
Theory of DNA melting curves
-
Fixman, M.; Freire, J. J. Theory of DNA melting curves Biopolymers 1977, 16, 2693-2704
-
(1977)
Biopolymers
, vol.16
, pp. 2693-2704
-
-
Fixman, M.1
Freire, J.J.2
-
41
-
-
0018846951
-
DNA sequencing and helix-coil transition. 1. Theory of DNA melting
-
Azbel, M. Y. DNA sequencing and helix-coil transition. 1. Theory of DNA melting Biopolymers 1980, 19, 61-80
-
(1980)
Biopolymers
, vol.19
, pp. 61-80
-
-
Azbel, M.Y.1
-
42
-
-
0023010470
-
The effect of sequence heterogeneity on DNA melting kinetics
-
Anshelevich, V. V.; Vologodskii, A. V. The effect of sequence heterogeneity on DNA melting kinetics J. Biomol. Struct. Dyn. 1986, 4, 251-262
-
(1986)
J. Biomol. Struct. Dyn.
, vol.4
, pp. 251-262
-
-
Anshelevich, V.V.1
Vologodskii, A.V.2
-
43
-
-
0030699999
-
Mechanical separation of the complementary strands of DNA
-
Essevaz-Roulet, B.; Bockelmann, U.; Heslot, F. Mechanical separation of the complementary strands of DNA Proc. Natl. Acad. Sci. U. S. A. 1997, 94, 11935-11940
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 11935-11940
-
-
Essevaz-Roulet, B.1
Bockelmann, U.2
Heslot, F.3
-
44
-
-
4243187319
-
Statistical mechanics of a nonlinear model for DNA denaturation
-
Peyrard, M.; Bishop, A. R. Statistical mechanics of a nonlinear model for DNA denaturation Phys. Rev. Lett. 1989, 62, 2755-2758
-
(1989)
Phys. Rev. Lett.
, vol.62
, pp. 2755-2758
-
-
Peyrard, M.1
Bishop, A.R.2
-
45
-
-
0000086155
-
DNA strand separation studied by single molecule force measurements
-
Bockelmann, U.; Essevaz-Roulet, B.; Heslot, F. DNA strand separation studied by single molecule force measurements Phys. Rev. E: Stat. Phys., Plasmas, Fluids, Relat. Interdiscip. Top. 1998, 58, 2386-2394
-
(1998)
Phys. Rev. E: Stat. Phys., Plasmas, Fluids, Relat. Interdiscip. Top.
, vol.58
, pp. 2386-2394
-
-
Bockelmann, U.1
Essevaz-Roulet, B.2
Heslot, F.3
-
46
-
-
0034069676
-
Mechanical stability of single DNA molecules
-
Clausen-Schaumann, H.; Rief, M.; Tolksdorf, C.; Gaub, H. E. Mechanical stability of single DNA molecules Biophys. J. 2000, 78, 1997-2007
-
(2000)
Biophys. J.
, vol.78
, pp. 1997-2007
-
-
Clausen-Schaumann, H.1
Rief, M.2
Tolksdorf, C.3
Gaub, H.E.4
-
47
-
-
0034549060
-
Transition characteristics and thermodynamic analysis of DNA duplex formation: A quantitative consideration for the extent of duplex association
-
Wu, P.; Sugimoto, N. Transition characteristics and thermodynamic analysis of DNA duplex formation: a quantitative consideration for the extent of duplex association Nucleic Acids Res. 2000, 28, 4762-4768
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4762-4768
-
-
Wu, P.1
Sugimoto, N.2
-
48
-
-
0037062480
-
Simulations of β-hairpin folding confined to spherical pores using distributed computing
-
Klimov, D. K.; Newfield, D.; Thirumalai, D. Simulations of β-hairpin folding confined to spherical pores using distributed computing Proc. Natl. Acad. Sci. U. S. A. 2002, 99, 8019-8024
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 8019-8024
-
-
Klimov, D.K.1
Newfield, D.2
Thirumalai, D.3
-
50
-
-
0038502170
-
Folding Dynamics and Mechanism of Beta-Hairpin Formation
-
Munoz, V.; Thompson, P.; Hofrichter, J.; Eaton, W. Folding Dynamics and Mechanism of Beta-Hairpin Formation Nature 1997, 390, 196-199
-
(1997)
Nature
, vol.390
, pp. 196-199
-
-
Munoz, V.1
Thompson, P.2
Hofrichter, J.3
Eaton, W.4
-
51
-
-
33644970590
-
Depletion force from macromolecular crowding enhances mechanical stability of protein molecules
-
Ping, G.; Yang, G.; Yuan, J. M. Depletion force from macromolecular crowding enhances mechanical stability of protein molecules Polymer 2006, 47, 2564-2570
-
(2006)
Polymer
, vol.47
, pp. 2564-2570
-
-
Ping, G.1
Yang, G.2
Yuan, J.M.3
-
52
-
-
56749155582
-
The effects of macromolecular crowding on the mechanical stability of protein molecules
-
Yuan, J. M. The effects of macromolecular crowding on the mechanical stability of protein molecules Protein Sci. 2008, 17, 2156-2166
-
(2008)
Protein Sci.
, vol.17
, pp. 2156-2166
-
-
Yuan, J.M.1
-
54
-
-
0033529908
-
Molecular Dynamics Simulations of Unfolding and Refolding of a Beta-Hairpin Fragment of Protein G
-
Pande, V.; Rokhsar, D. Molecular Dynamics Simulations of Unfolding and Refolding of a Beta-Hairpin Fragment of Protein G Proc. Natl. Acad. Sci. U. S. A. 1999, 96, 9062-9067
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 9062-9067
-
-
Pande, V.1
Rokhsar, D.2
-
55
-
-
0033529946
-
Understanding Beta-Hairpin Formation
-
Dinner, A.; Lazaridis, T.; Karplus, M. Understanding Beta-Hairpin Formation Proc. Natl. Acad. Sci. U. S. A. 1999, 96, 9068-9073
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 9068-9073
-
-
Dinner, A.1
Lazaridis, T.2
Karplus, M.3
-
56
-
-
0034081255
-
Mechanical Unfolding of a Beta-Hairpin UsingMolecular Dynamics
-
Bryant, Z.; Pande, V.; Rokhsar, D. Mechanical Unfolding of a Beta-Hairpin UsingMolecular Dynamics Biophys. J. 2000, 78, 584-589
-
(2000)
Biophys. J.
, vol.78
, pp. 584-589
-
-
Bryant, Z.1
Pande, V.2
Rokhsar, D.3
-
57
-
-
0035909921
-
The Free Energy Landscape for Beta Hairpin Folding in Explicit Water
-
Zhou, R.; Berne, B.; Germain, R. The Free Energy Landscape for Beta Hairpin Folding in Explicit Water Proc. Natl. Acad. Sci. U. S. A. 2001, 98, 14931-14936
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 14931-14936
-
-
Zhou, R.1
Berne, B.2
Germain, R.3
-
58
-
-
79960592580
-
Microscopic Events in Beta-Hairpin Folding from Alternative Unfolded Ensembles
-
Best, R. B.; Mittal, J. Microscopic Events in Beta-Hairpin Folding from Alternative Unfolded Ensembles Proc. Natl. Acad. Sci. U. S. A. 2011, 108, 11087-11092
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 11087-11092
-
-
Best, R.B.1
Mittal, J.2
-
59
-
-
84864720105
-
Smoothing of the GB1 Hairpin Folding Landscape by Interfacial Confinement
-
Bhattacharya, A.; Best, R. B.; Mittal, J. Smoothing of the GB1 Hairpin Folding Landscape by Interfacial Confinement Biophys. J. 2012, 103, 596-600
-
(2012)
Biophys. J.
, vol.103
, pp. 596-600
-
-
Bhattacharya, A.1
Best, R.B.2
Mittal, J.3
-
60
-
-
0001202352
-
Monte Carlo studies on the freely jointed polymer chain with excluded volume interaction
-
Baumg̈artner, A.; Binder, K. Monte Carlo studies on the freely jointed polymer chain with excluded volume interaction J. Chem. Phys. 1979, 71, 2541-2545
-
(1979)
J. Chem. Phys.
, vol.71
, pp. 2541-2545
-
-
Baumg̈artner, A.1
Binder, K.2
-
61
-
-
36549102545
-
Static properties of polymer-chains in porous-media
-
Honeycutt, J.; Thirumalai, D. Static properties of polymer-chains in porous-media J. Chem. Phys. 1989, 90, 4542-4559
-
(1989)
J. Chem. Phys.
, vol.90
, pp. 4542-4559
-
-
Honeycutt, J.1
Thirumalai, D.2
-
62
-
-
58149498257
-
Thermodynamics and Kinetics of Protein Folding under Confinement
-
Mittal, J.; Best, R. B. Thermodynamics and Kinetics of Protein Folding under Confinement Proc. Natl. Acad. Sci. U. S. A. 2008, 105, 20233-20238
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 20233-20238
-
-
Mittal, J.1
Best, R.B.2
-
63
-
-
65249154187
-
Confinement Effects on the Kinetics and Thermodynamics of Protein Dimerization
-
Wang, W.; Xu, W. X.; Levy, Y.; Trizac, E.; Wolynes, P. G. Confinement Effects on the Kinetics and Thermodynamics of Protein Dimerization Proc. Natl. Acad. Sci. U. S. A. 2009, 106, 5517-5522
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 5517-5522
-
-
Wang, W.1
Xu, W.X.2
Levy, Y.3
Trizac, E.4
Wolynes, P.G.5
-
64
-
-
80055014857
-
Folding of glycosylated proteins under confinement
-
Shental-Bechor, D.; Levy, Y. Folding of glycosylated proteins under confinement J. Chem. Phys. 2011, 135 141104
-
(2011)
J. Chem. Phys.
, vol.135
, pp. 141104
-
-
Shental-Bechor, D.1
Levy, Y.2
-
65
-
-
84864863506
-
Multiple Barriers in Forced Rupture of Protein Complexes
-
Hyeon, C.; Thirumalai, D. Multiple Barriers in Forced Rupture of Protein Complexes J. Chem. Phys. 2012, 137 η055103
-
(2012)
J. Chem. Phys.
, vol.137
, pp. 055103
-
-
Hyeon, C.1
Thirumalai, D.2
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