-
1
-
-
0029160310
-
The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana
-
Abel, S., Nguyen, M.D., and Theologis, A. (1995). The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. J. Mol. Biol. 251: 533-549.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 533-549
-
-
Abel, S.1
Nguyen, M.D.2
Theologis, A.3
-
2
-
-
0035337065
-
The chimeric leucine-rich repeat/extensin cell wall protein LRX1 is required for root hair morphogenesis in Arabidopsis thaliana
-
Baumberger, N., Ringli, C., and Keller, B. (2001). The chimeric leucine-rich repeat/extensin cell wall protein LRX1 is required for root hair morphogenesis in Arabidopsis thaliana. Genes Dev. 15: 1128-1139.
-
(2001)
Genes Dev.
, vol.15
, pp. 1128-1139
-
-
Baumberger, N.1
Ringli, C.2
Keller, B.3
-
3
-
-
0037629264
-
Synergistic interaction of the two paralogous Arabidopsis genes LRX1 and LRX2 in cell wall formation during root hair development
-
Baumberger, N., Steiner, M., Ryser, U., Keller, B., and Ringli, C. (2003). Synergistic interaction of the two paralogous Arabidopsis genes LRX1 and LRX2 in cell wall formation during root hair development. Plant J. 35: 71-81.
-
(2003)
Plant J.
, vol.35
, pp. 71-81
-
-
Baumberger, N.1
Steiner, M.2
Ryser, U.3
Keller, B.4
Ringli, C.5
-
4
-
-
82755161225
-
Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins
-
Berckmans, B., et al. (2011). Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins. Plant Cell 23: 3671-3683.
-
(2011)
Plant Cell
, vol.23
, pp. 3671-3683
-
-
Berckmans, B.1
-
5
-
-
19944428972
-
The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots
-
Blilou, I., Xu, J., Wildwater, M., Willemsen, V., Paponov, I., Friml, J., Heidstra, R., Aida, M., Palme, K., and Scheres, B. (2005). The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature 433: 39-44.
-
(2005)
Nature
, vol.433
, pp. 39-44
-
-
Blilou, I.1
Xu, J.2
Wildwater, M.3
Willemsen, V.4
Paponov, I.5
Friml, J.6
Heidstra, R.7
Aida, M.8
Palme, K.9
Scheres, B.10
-
6
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
Bolstad, B.M., Irizarry, R.A., Astrand, M., and Speed, T.P. (2003). A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
7
-
-
38149109010
-
A high-resolution root spatiotemporal map reveals dominant expression patterns
-
Brady, S.M., Orlando, D.A., Lee, J.Y., Wang, J.Y., Koch, J., Dinneny, J.R., Mace, D., Ohler, U., and Benfey, P.N. (2007). A high-resolution root spatiotemporal map reveals dominant expression patterns. Science 318: 801-806.
-
(2007)
Science
, vol.318
, pp. 801-806
-
-
Brady, S.M.1
Orlando, D.A.2
Lee, J.Y.3
Wang, J.Y.4
Koch, J.5
Dinneny, J.R.6
Mace, D.7
Ohler, U.8
Benfey, P.N.9
-
8
-
-
0027351945
-
Structural models of primary cell walls in flowering plants: Consistency of molecular structure with the physical properties of the walls during growth
-
Carpita, N.C., and Gibeaut, D.M. (1993). Structural models of primary cell walls in flowering plants: Consistency of molecular structure with the physical properties of the walls during growth. Plant J. 3: 1-30.
-
(1993)
Plant J.
, vol.3
, pp. 1-30
-
-
Carpita, N.C.1
Gibeaut, D.M.2
-
9
-
-
0031214473
-
Auxin regulation and spatial localization of an endo-1,4-beta-D-glucanase and a xyloglucan endotransglycosylase in expanding tomato hypocotyls
-
Catalá, C., Rose, J.K., and Bennett, A.B. (1997). Auxin regulation and spatial localization of an endo-1,4-beta-D-glucanase and a xyloglucan endotransglycosylase in expanding tomato hypocotyls. Plant J. 12: 417-426.
-
(1997)
Plant J.
, vol.12
, pp. 417-426
-
-
Catalá, C.1
Rose, J.K.2
Bennett, A.B.3
-
10
-
-
71149122029
-
Mechanism of auxin-regulated gene expression in plants
-
Chapman, E.J., and Estelle, M. (2009). Mechanism of auxin-regulated gene expression in plants. Annu. Rev. Genet. 43: 265-285.
-
(2009)
Annu. Rev. Genet.
, vol.43
, pp. 265-285
-
-
Chapman, E.J.1
Estelle, M.2
-
11
-
-
17644398746
-
Systematic variation normalization in microarray data to get gene expression comparison unbiased
-
Chou, J.W., Paules, R.S., and Bushel, P.R. (2005). Systematic variation normalization in microarray data to get gene expression comparison unbiased. J. Bioinform. Comput. Biol. 3: 225-241.
-
(2005)
J. Bioinform. Comput. Biol.
, vol.3
, pp. 225-241
-
-
Chou, J.W.1
Paules, R.S.2
Bushel, P.R.3
-
12
-
-
33846395476
-
Knockout of the AtCESA2 gene affects microtubule orientation and causes abnormal cell expansion in Arabidopsis
-
Chu, Z., Chen, H., Zhang, Y., Zhang, Z., Zheng, N., Yin, B., Yan, H., Zhu, L., Zhao, X., Yuan, M., Zhang, X., and Xie, Q. (2007). Knockout of the AtCESA2 gene affects microtubule orientation and causes abnormal cell expansion in Arabidopsis. Plant Physiol. 143: 213-224.
-
(2007)
Plant Physiol.
, vol.143
, pp. 213-224
-
-
Chu, Z.1
Chen, H.2
Zhang, Y.3
Zhang, Z.4
Zheng, N.5
Yin, B.6
Yan, H.7
Zhu, L.8
Zhao, X.9
Yuan, M.10
Zhang, X.11
Xie, Q.12
-
13
-
-
27644525170
-
Growth of the plant cell wall
-
Cosgrove, D.J. (2005). Growth of the plant cell wall. Nat. Rev. Mol. Cell Biol. 6: 850-861.
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 850-861
-
-
Cosgrove, D.J.1
-
14
-
-
0000494727
-
Short-lived and phosphorylated proteins contribute to carrier-mediated efflux, but not to influx, of auxin in suspension-cultured tobacco cells
-
Delbarre, A., Muller, P., and Guern, J. (1998). Short-lived and phosphorylated proteins contribute to carrier-mediated efflux, but not to influx, of auxin in suspension-cultured tobacco cells. Plant Physiol. 116: 833-844.
-
(1998)
Plant Physiol.
, vol.116
, pp. 833-844
-
-
Delbarre, A.1
Muller, P.2
Guern, J.3
-
15
-
-
12444313374
-
Root cap specific expression of an endo-beta-1,4-Dglucanase (cellulase): A new marker to study root development in Arabidopsis
-
del Campillo, E., Abdel-Aziz, A., Crawford, D., and Patterson, S.E. (2004). Root cap specific expression of an endo-beta-1,4-Dglucanase (cellulase): A new marker to study root development in Arabidopsis. Plant Mol. Biol. 56: 309-323.
-
(2004)
Plant Mol. Biol.
, vol.56
, pp. 309-323
-
-
del Campillo, E.1
Abdel-Aziz, A.2
Crawford, D.3
Patterson, S.E.4
-
16
-
-
77957829871
-
A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity
-
De Rybel, B., et al. (2010). A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity. Curr. Biol. 20: 1697-1706.
-
(2010)
Curr. Biol.
, vol.20
, pp. 1697-1706
-
-
De Rybel, B.1
-
17
-
-
19544379019
-
The F-box protein TIR1 is an auxin receptor
-
Dharmasiri, N., Dharmasiri, S., and Estelle, M. (2005a). The F-box protein TIR1 is an auxin receptor. Nature 435: 441-445.
-
(2005)
Nature
, vol.435
, pp. 441-445
-
-
Dharmasiri, N.1
Dharmasiri, S.2
Estelle, M.3
-
18
-
-
21344458139
-
Plant development is regulated by a family of auxin receptor F box proteins
-
Dharmasiri, N., Dharmasiri, S., Weijers, D., Lechner, E., Yamada, M., Hobbie, L., Ehrismann, J.S., Jürgens, G., and Estelle, M. (2005b). Plant development is regulated by a family of auxin receptor F box proteins. Dev. Cell 9: 109-119.
-
(2005)
Dev. Cell
, vol.9
, pp. 109-119
-
-
Dharmasiri, N.1
Dharmasiri, S.2
Weijers, D.3
Lechner, E.4
Yamada, M.5
Hobbie, L.6
Ehrismann, J.S.7
Jürgens, G.8
Estelle, M.9
-
19
-
-
0036081355
-
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
-
Edgar, R., Domrachev, M., and Lash, A.E. (2002). Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res. 30: 207-210.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
-
20
-
-
77953210908
-
Arabinogalactanproteins: Key regulators at the cell surface?
-
Ellis, M., Egelund, J., Schultz, C.J., and Bacic, A. (2010). Arabinogalactanproteins: Key regulators at the cell surface? Plant Physiol. 153: 403-419.
-
(2010)
Plant Physiol.
, vol.153
, pp. 403-419
-
-
Ellis, M.1
Egelund, J.2
Schultz, C.J.3
Bacic, A.4
-
21
-
-
30444448850
-
A gradient of auxin and auxin-dependent transcription precedes tropic growth responses
-
Esmon, C.A., Tinsley, A.G., Ljung, K., Sandberg, G., Hearne, L.B., and Liscum, E. (2006). A gradient of auxin and auxin-dependent transcription precedes tropic growth responses. Proc. Natl. Acad. Sci. USA 103: 236-241.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 236-241
-
-
Esmon, C.A.1
Tinsley, A.G.2
Ljung, K.3
Sandberg, G.4
Hearne, L.B.5
Liscum, E.6
-
22
-
-
77953219138
-
The biochemistry and structural biology of plant cell wall deconstruction
-
Gilbert, H.J. (2010). The biochemistry and structural biology of plant cell wall deconstruction. Plant Physiol. 153: 444-455.
-
(2010)
Plant Physiol.
, vol.153
, pp. 444-455
-
-
Gilbert, H.J.1
-
23
-
-
11144356565
-
Transcript profiling of early lateral root initiation
-
Himanen, K., Vuylsteke, M., Vanneste, S., Vercruysse, S., Boucheron, E., Alard, P., Chriqui, D., Van Montagu, M., Inzé, D., and Beeckman, T. (2004). Transcript profiling of early lateral root initiation. Proc. Natl. Acad. Sci. USA 101: 5146-5151.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 5146-5151
-
-
Himanen, K.1
Vuylsteke, M.2
Vanneste, S.3
Vercruysse, S.4
Boucheron, E.5
Alard, P.6
Chriqui, D.7
Van Montagu, M.8
Inzé, D.9
Beeckman, T.10
-
24
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang, W., Sherman, B.T., and Lempicki, R.A. (2009a). Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4: 44-57.
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
25
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Huang, W., Sherman, B.T., and Lempicki, R.A. (2009b). Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 37: 1-13.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 1-13
-
-
Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
26
-
-
27744577989
-
VANGUARD1 encodes a pectin methylesterase that enhances pollen tube growth in the Arabidopsis style and transmitting tract
-
Jiang, L., Yang, S.L., Xie, L.F., Puah, C.S., Zhang, X.Q., Yang, W.C., Sundaresan, V., and Ye, D. (2005). VANGUARD1 encodes a pectin methylesterase that enhances pollen tube growth in the Arabidopsis style and transmitting tract. Plant Cell 17: 584-596.
-
(2005)
Plant Cell
, vol.17
, pp. 584-596
-
-
Jiang, L.1
Yang, S.L.2
Xie, L.F.3
Puah, C.S.4
Zhang, X.Q.5
Yang, W.C.6
Sundaresan, V.7
Ye, D.8
-
27
-
-
19544386804
-
The Arabidopsis F-box protein TIR1 is an auxin receptor
-
Kepinski, S., and Leyser, O. (2005). The Arabidopsis F-box protein TIR1 is an auxin receptor. Nature 435: 446-451.
-
(2005)
Nature
, vol.435
, pp. 446-451
-
-
Kepinski, S.1
Leyser, O.2
-
28
-
-
77953490936
-
Microarray detection call methodology as a means to identify and compare transcripts expressed within syncytial cells from soybean (Glycine max) roots undergoing resistant and susceptible reactions to the soybean cyst nematode (Heterodera glycines)
-
Klink, V.P., Overall, C.C., Alkharouf, N.W., Macdonald, M.H., and Matthews, B.F. (2010). Microarray detection call methodology as a means to identify and compare transcripts expressed within syncytial cells from soybean (Glycine max) roots undergoing resistant and susceptible reactions to the soybean cyst nematode (Heterodera glycines). J. Biomed. Biotechnol. 2010: 491217.
-
(2010)
J. Biomed. Biotechnol.
, vol.2010
, pp. 491217
-
-
Klink, V.P.1
Overall, C.C.2
Alkharouf, N.W.3
McDonald, M.H.4
Matthews, B.F.5
-
29
-
-
33745386956
-
Expression profiling of auxin-treated Arabidopsis roots: Toward a molecular analysis of lateral root emergence
-
Laskowski, M., Biller, S., Stanley, K., Kajstura, T., and Prusty, R. (2006). Expression profiling of auxin-treated Arabidopsis roots: Toward a molecular analysis of lateral root emergence. Plant Cell Physiol. 47: 788-792.
-
(2006)
Plant Cell Physiol.
, vol.47
, pp. 788-792
-
-
Laskowski, M.1
Biller, S.2
Stanley, K.3
Kajstura, T.4
Prusty, R.5
-
30
-
-
58149153143
-
Root system architecture from coupling cell shape to auxin transport
-
Laskowski, M., Grieneisen, V.A., Hofhuis, H., Hove, C.A., Hogeweg, P., Marée, A.F., and Scheres, B. (2008). Root system architecture from coupling cell shape to auxin transport. PLoS Biol. 6: e307.
-
(2008)
PLoS Biol.
, vol.6
-
-
Laskowski, M.1
Grieneisen, V.A.2
Hofhuis, H.3
Hove, C.A.4
Hogeweg, P.5
Marée, A.F.6
Scheres, B.7
-
31
-
-
69949119665
-
Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression
-
Lee, D.J., Park, J.W., Lee, H.W., and Kim, J. (2009). Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression. J. Exp. Bot. 60: 3935-3957.
-
(2009)
J. Exp. Bot.
, vol.60
, pp. 3935-3957
-
-
Lee, D.J.1
Park, J.W.2
Lee, H.W.3
Kim, J.4
-
32
-
-
33646723046
-
Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis
-
Levesque, M.P., Vernoux, T., Busch, W., Cui, H., Wang, J.Y., Blilou, I., Hassan, H., Nakajima, K., Matsumoto, N., Lohmann, J.U., Scheres, B., and Benfey, P.N. (2006). Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. PLoS Biol. 4: e143.
-
(2006)
PLoS Biol.
, vol.4
-
-
Levesque, M.P.1
Vernoux, T.2
Busch, W.3
Cui, H.4
Wang, J.Y.5
Blilou, I.6
Hassan, H.7
Nakajima, K.8
Matsumoto, N.9
Lohmann, J.U.10
Scheres, B.11
Benfey, P.N.12
-
33
-
-
79960793496
-
Ethylene inhibits lateral root development, increases IAA transport and expression of PIN3 and PIN7 auxin efflux carriers
-
Lewis, D.R., Negi, S., Sukumar, P., and Muday, G.K. (2011a). Ethylene inhibits lateral root development, increases IAA transport and expression of PIN3 and PIN7 auxin efflux carriers. Development 138: 3485-3495.
-
(2011)
Development
, vol.138
, pp. 3485-3495
-
-
Lewis, D.R.1
Negi, S.2
Sukumar, P.3
Muday, G.K.4
-
34
-
-
79956052502
-
Auxin and ethylene induce flavonol accumulation through distinct transcriptional networks
-
Lewis, D.R., Ramirez, M.V., Miller, N.D., Vallabhaneni, P., Ray, W.K., Helm, R.F., Winkel, B.S., and Muday, G.K. (2011b). Auxin and ethylene induce flavonol accumulation through distinct transcriptional networks. Plant Physiol. 156: 144-164.
-
(2011)
Plant Physiol.
, vol.156
, pp. 144-164
-
-
Lewis, D.R.1
Ramirez, M.V.2
Miller, N.D.3
Vallabhaneni, P.4
Ray, W.K.5
Helm, R.F.6
Winkel, B.S.7
Muday, G.K.8
-
35
-
-
0031027182
-
Organization and cell differentiation in lateral roots of Arabidopsis thaliana
-
Malamy, J.E., and Benfey, P.N. (1997). Organization and cell differentiation in lateral roots of Arabidopsis thaliana. Development 124: 33-44.
-
(1997)
Development
, vol.124
, pp. 33-44
-
-
Malamy, J.E.1
Benfey, P.N.2
-
36
-
-
0035697452
-
Insertional mutagenesis of genes required for seed development in Arabidopsis thaliana
-
McElver, J., et al. (2001). Insertional mutagenesis of genes required for seed development in Arabidopsis thaliana. Genetics 159: 1751-1763.
-
(2001)
Genetics
, vol.159
, pp. 1751-1763
-
-
McElver, J.1
-
37
-
-
0038724494
-
Consensus Clustering: A resampling-based method for class discovery and visualization of gene expression microarray data
-
Monti, S., Tamayo, P., Mesirov, J., and Golub, T. (2003). Consensus Clustering: A resampling-based method for class discovery and visualization of gene expression microarray data. Mach. Learn. 52: 91-118.
-
(2003)
Mach. Learn.
, vol.52
, pp. 91-118
-
-
Monti, S.1
Tamayo, P.2
Mesirov, J.3
Golub, T.4
-
38
-
-
0035209943
-
Multidrug resistance-like genes of Arabidopsis required for auxin transport and auxin-mediated development
-
Noh, B., Murphy, A.S., and Spalding, E.P. (2001). Multidrug resistance-like genes of Arabidopsis required for auxin transport and auxin-mediated development. Plant Cell 13: 2441-2454.
-
(2001)
Plant Cell
, vol.13
, pp. 2441-2454
-
-
Noh, B.1
Murphy, A.S.2
Spalding, E.P.3
-
39
-
-
22044442256
-
AUXIN RESPONSE FACTOR 2 (ARF2): A pleiotropic developmental regulator
-
Okushima, Y., Mitina, I., Quach, H.L., and Theologis, A. (2005a). AUXIN RESPONSE FACTOR 2 (ARF2): A pleiotropic developmental regulator. Plant J. 43: 29-46.
-
(2005)
Plant J.
, vol.43
, pp. 29-46
-
-
Okushima, Y.1
Mitina, I.2
Quach, H.L.3
Theologis, A.4
-
40
-
-
20044394137
-
Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: Unique and overlapping functions of ARF7 and ARF19
-
Okushima, Y., et al. (2005b). Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: Unique and overlapping functions of ARF7 and ARF19. Plant Cell 17: 444-463.
-
(2005)
Plant Cell
, vol.17
, pp. 444-463
-
-
Okushima, Y.1
-
41
-
-
79954465159
-
2ATmd: A tool for integration of the figure of merit with cluster analysis for gene expression data
-
2ATmd: A tool for integration of the figure of merit with cluster analysis for gene expression data. Bioinformatics 27: 1330-1331.
-
(2011)
Bioinformatics
, vol.27
, pp. 1330-1331
-
-
Olex, A.L.1
Fetrow, J.S.2
-
42
-
-
34248393957
-
Additional limitations of the clustering validation method figure of merit
-
In (New York: Association for Computing Machinery)
-
Olex, A.L., John, D.J., Hiltbold, E.M., and Fetrow, J.S. (2007). Additional limitations of the clustering validation method figure of merit. In Proceedings of the 45th ACM Southeast Annual Conference (New York: Association for Computing Machinery), pp. 238-243.
-
(2007)
Proceedings of the 45th ACM Southeast Annual Conference
, pp. 238-243
-
-
Olex, A.L.1
John, D.J.2
Hiltbold, E.M.3
Fetrow, J.S.4
-
43
-
-
77955100740
-
Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates
-
Olex, A.L., Hiltbold, E.M., Leng, X., and Fetrow, J.S. (2010). Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates. BMC Immunol. 11: 41.
-
(2010)
BMC Immunol.
, vol.11
, pp. 41
-
-
Olex, A.L.1
Hiltbold, E.M.2
Leng, X.3
Fetrow, J.S.4
-
45
-
-
33644823601
-
Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana
-
Overvoorde, P.J., et al. (2005). Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. Plant Cell 17: 3282-3300.
-
(2005)
Plant Cell
, vol.17
, pp. 3282-3300
-
-
Overvoorde, P.J.1
-
46
-
-
60449090629
-
Comprehensive transcriptome analysis of auxin responses in Arabidopsis
-
Paponov, I.A., Paponov, M., Teale, W., Menges, M., Chakrabortee, S., Murray, J.A., and Palme, K. (2008). Comprehensive transcriptome analysis of auxin responses in Arabidopsis. Mol. Plant 1: 321-337.
-
(2008)
Mol. Plant
, vol.1
, pp. 321-337
-
-
Paponov, I.A.1
Paponov, M.2
Teale, W.3
Menges, M.4
Chakrabortee, S.5
Murray, J.A.6
Palme, K.7
-
47
-
-
79957472951
-
Seven things we think we know about auxin transport
-
Peer, W.A., Blakeslee, J.J., Yang, H., and Murphy, A.S. (2011). Seven things we think we know about auxin transport. Mol. Plant 4: 487-504.
-
(2011)
Mol. Plant
, vol.4
, pp. 487-504
-
-
Peer, W.A.1
Blakeslee, J.J.2
Yang, H.3
Murphy, A.S.4
-
49
-
-
2342501846
-
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array
-
Redman, J.C., Haas, B.J., Tanimoto, G., and Town, C.D. (2004). Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J. 38: 545-561.
-
(2004)
Plant J.
, vol.38
, pp. 545-561
-
-
Redman, J.C.1
Haas, B.J.2
Tanimoto, G.3
Town, C.D.4
-
50
-
-
0036883487
-
Biosynthesis and properties of the plant cell wall
-
Reiter, W.D. (2002). Biosynthesis and properties of the plant cell wall. Curr. Opin. Plant Biol. 5: 536-542.
-
(2002)
Curr. Opin. Plant Biol.
, vol.5
, pp. 536-542
-
-
Reiter, W.D.1
-
51
-
-
77955669078
-
The hydroxyproline-rich glycoprotein domain of the Arabidopsis LRX1 requires Tyr for function but not for insolubilization in the cell wall
-
Ringli, C. (2010). The hydroxyproline-rich glycoprotein domain of the Arabidopsis LRX1 requires Tyr for function but not for insolubilization in the cell wall. Plant J. 63: 662-669.
-
(2010)
Plant J.
, vol.63
, pp. 662-669
-
-
Ringli, C.1
-
52
-
-
77953286795
-
Phytohormones and the cell wall in Arabidopsis during seedling growth
-
Sánchez-Rodríguez, C., Rubio-Somoza, I., Sibout, R., and Persson, S. (2010). Phytohormones and the cell wall in Arabidopsis during seedling growth. Trends Plant Sci. 15: 291-301.
-
(2010)
Trends Plant Sci.
, vol.15
, pp. 291-301
-
-
Sánchez-Rodríguez, C.1
Rubio-Somoza, I.2
Sibout, R.3
Persson, S.4
-
53
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P., Markiel, A., Ozier, O., Baliga, N.S., Wang, J.T., Ramage, D., Amin, N., Schwikowski, B., and Ideker, T. (2003). Cytoscape: A software environment for integrated models of biomolecular interaction networks. Genome Res. 13: 2498-2504.
-
(2003)
Genome Res.
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
54
-
-
34848899527
-
The Arabidopsis transcription factor MYB77 modulates auxin signal transduction
-
Shin, R., Burch, A.Y., Huppert, K.A., Tiwari, S.B., Murphy, A.S., Guilfoyle, T.J., and Schachtman, D.P. (2007). The Arabidopsis transcription factor MYB77 modulates auxin signal transduction. Plant Cell 19: 2440-2453.
-
(2007)
Plant Cell
, vol.19
, pp. 2440-2453
-
-
Shin, R.1
Burch, A.Y.2
Huppert, K.A.3
Tiwari, S.B.4
Murphy, A.S.5
Guilfoyle, T.J.6
Schachtman, D.P.7
-
55
-
-
48649110201
-
The auxin influx carrier LAX3 promotes lateral root emergence
-
Swarup, K., et al. (2008). The auxin influx carrier LAX3 promotes lateral root emergence. Nat. Cell Biol. 10: 946-954.
-
(2008)
Nat. Cell Biol.
, vol.10
, pp. 946-954
-
-
Swarup, K.1
-
57
-
-
0033545881
-
Activation and repression of transcription by auxin-response factors
-
Ulmasov, T., Hagen, G., and Guilfoyle, T.J. (1999). Activation and repression of transcription by auxin-response factors. Proc. Natl. Acad. Sci. USA 96: 5844-5849.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 5844-5849
-
-
Ulmasov, T.1
Hagen, G.2
Guilfoyle, T.J.3
-
58
-
-
34547906130
-
Structural organization and a standardized nomenclature for plant endo-1,4-beta-glucanases (cellulases) of glycosyl hydrolase family 9
-
Urbanowicz, B.R., Bennett, A.B., Del Campillo, E., Catalá, C., Hayashi, T., Henrissat, B., Höfte, H., McQueen-Mason, S.J., Patterson, S.E., Shoseyov, O., Teeri, T.T., and Rose, J.K. (2007). Structural organization and a standardized nomenclature for plant endo-1,4-beta-glucanases (cellulases) of glycosyl hydrolase family 9. Plant Physiol. 144: 1693-1696.
-
(2007)
Plant Physiol.
, vol.144
, pp. 1693-1696
-
-
Urbanowicz, B.R.1
Bennett, A.B.2
Del Campillo, E.3
Catalá, C.4
Hayashi, T.5
Henrissat, B.6
Höfte, H.7
McQueen-Mason, S.J.8
Patterson, S.E.9
Shoseyov, O.10
Teeri, T.T.11
Rose, J.K.12
-
59
-
-
27744537609
-
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana
-
Vanneste, S., et al. (2005). Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana. Plant Cell 17: 3035-3050.
-
(2005)
Plant Cell
, vol.17
, pp. 3035-3050
-
-
Vanneste, S.1
-
60
-
-
27744545648
-
Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression
-
Vieten, A., Vanneste, S., Wisniewska, J., Benková, E., Benjamins, R., Beeckman, T., Luschnig, C., and Friml, J. (2005). Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression. Development 132: 4521-4531.
-
(2005)
Development
, vol.132
, pp. 4521-4531
-
-
Vieten, A.1
Vanneste, S.2
Wisniewska, J.3
Benková, E.4
Benjamins, R.5
Beeckman, T.6
Luschnig, C.7
Friml, J.8
-
61
-
-
19544366287
-
Auxin: Regulation, action, and interaction
-
Woodward, A.W., and Bartel, B. (2005). Auxin: Regulation, action, and interaction. Ann. Bot. (Lond.) 95: 707-735.
-
(2005)
Ann. Bot. (Lond.)
, vol.95
, pp. 707-735
-
-
Woodward, A.W.1
Bartel, B.2
-
62
-
-
0032103395
-
Differential effects of 1-naphthaleneacetic acid, indole-3-acetic acid and 2,4-dichlorophenoxyacetic acid on the gravitropic response of roots in an auxin-resistant mutant of Arabidopsis, aux1
-
Yamamoto, M., and Yamamoto, K.T. (1998). Differential effects of 1-naphthaleneacetic acid, indole-3-acetic acid and 2,4-dichlorophenoxyacetic acid on the gravitropic response of roots in an auxin-resistant mutant of Arabidopsis, aux1. Plant Cell Physiol. 39: 660-664.
-
(1998)
Plant Cell Physiol.
, vol.39
, pp. 660-664
-
-
Yamamoto, M.1
Yamamoto, K.T.2
-
63
-
-
0035024021
-
Validating clustering for gene expression data
-
Yeung, K.Y., Haynor, D.R., and Ruzzo, W.L. (2001). Validating clustering for gene expression data. Bioinformatics 17: 309-318.
-
(2001)
Bioinformatics
, vol.17
, pp. 309-318
-
-
Yeung, K.Y.1
Haynor, D.R.2
Ruzzo, W.L.3
-
64
-
-
77956826794
-
Auxin transporters-Why so many? Cold Spring Harb
-
Zazímalová, E., Murphy, A.S., Yang, H.B., Hoyerová, K., and Hosek, P. (2010). Auxin transporters-Why so many? Cold Spring Harb. Perspect. Biol. 2: a001552.
-
(2010)
Perspect. Biol.
, vol.2
-
-
Zazímalová, E.1
Murphy, A.S.2
Yang, H.B.3
Hoyerová, K.4
Hosek, P.5
-
65
-
-
13444264729
-
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox
-
Zimmermann, P., Hirsch-Hoffmann, M., Hennig, L., and Gruissem, W. (2004). GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol. 136: 2621-2632.
-
(2004)
Plant Physiol.
, vol.136
, pp. 2621-2632
-
-
Zimmermann, P.1
Hirsch-Hoffmann, M.2
Hennig, L.3
Gruissem, W.4
|