N-Acyl-homoserine-Lactone Quorum-Sensing Signaling in Phenazine and Cyclic Lipopeptide-Producing Pseudomonas sp. CMR12a from the Red Cocoyam Rhizosphere

Molecular Microbial Ecology of the Rhizosphere: Volume 1

Volumn 1, Issue , 2013, Pages 763-774

  De Maeyer, Katrien ^a   D’aes, Jolien ^a   Hua, Gia K H ^a   Kieu, Nam Phuong ^a   Höfte, Monica ^a  

^a GHENT UNIVERSITY   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84886480837     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9781118297674.ch72     Document Type: Chapter

References (55)

1. Andersen JB, Heydorn A, Hentzer M, Eberl L, Geisenberger O, Christensen BB, Molin S, Givskov M. gfp-based N-acylhomoserine-lactone sensor systems for detection of bacterial communication. Appl Environ Microbiol 2001;67:575–585.
2. Anjaiah V, Koedam N, Nowak-Thompson B, Loper JE, Höfte M, Tambong JT, Cornelis P. Involvement of phenazines and anthranilate in the antagonism of Pseudomonas aeruginosa PNA1 and Tn5 derivatives toward Fusarium spp. and Pythium spp. Mol Plant-Microbe Interact 1998;11:847–854.
3. Bertani I, Venturi V. Regulation of the N-acyl homoserine lactonedependent quorum-sensing system in rhizosphere Pseudomonas putida WCS358 and cross-talk with the stationary-phase RpoS sigma factor and the global regulator GacA. Appl Environ Microbiol 2004;70:5493–5502.
4. Cha C, Gao P, Chen YC, Shaw PD, Farrand SK. Production of acyl–homoserine lactone quorum-sensing signals by gram-negative plant-associated bacteria. Mol Plant-Microbe Interact 1998;11:1119–1129.
5. Chin-A-Woeng TFC, Thomas-Oates JE, Lugtenberg BJJ, Bloemberg GV. Introduction of the phzH gene of Pseudomonas chlororaphis PCL1391 extends the range of biocontrol ability of phenazine-1-carboxylic acid-producing Pseudomonas spp. strains. Mol Plant-Microbe Interact 2001a;14:1006–1015.
6. Chin-A-Woeng TFC, van den Broek D, de Voer G, van der Drift K, Tuinman S, Thomas-Oates JE, Lugtenberg BJJ, Bloemberg GV. Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium. Mol Plant-Microbe Interact 2001b;14:969–979.
7. Cui X, Harling R, Mutch P, Darling D. Identification of N-3-hydroxyoctanoyl-homoserine lactone production in Pseudomonas fluorescens 5064, pathogenic to broccoli, and controlling biosurfactant production by quorum sensing. Eur J Plant Pathol 2005;111:297–308.
8. D’aes J, De Maeyer K, Pauwelyn E, Höfte M. Biosurfactants in plant-Pseudomonas interactions and their importance to biocontrol. Environ Microbiol Rep 2010;2:359–372.
9. D’aes J, Gia Khuong Hoang H, De Maeyer K, Pannecoucque J, Forrez I, Ongena M, Dietrich LEP, Thomashow LS, et al. Biological control of Rhizoctonia root rot on bean by phenazine- and cyclic cipopeptide-producing Pseudomonas CMR12a. Phytopathology 2011;101:996–1004.
10. De Maeyer K, D’Aes J, Hua GKH, Perneel M, Vanhaecke L, Noppe H, Hofte M. N-Acylhomoserine lactone quorum-sensing signalling in antagonistic phenazine-producing Pseudomonas isolates from the red cocoyam rhizosphere. Microbiology 2011;157: 459–472.
11. Debode J, De Maeyer K, Perneel M, Pannecoucque J, De Backer G, Hofte M. Biosurfactants are involved in the biological control of Verticillium microsclerotia by Pseudomonas spp. J Appl Microbiol 2007;103:1184–1196.
12. Dietrich LEP, Price-Whelan A, Petersen A, Whiteley M, Newman DK. The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa. Mol Microbiol 2006;61:1308–1321.
13. Dubern JF, Lugtenberg BJJ, Bloemberg GV. The ppuI-rsaL-ppuR quorum-sensing system regulates biofilm formation of Pseudomonas putida PCL1445 by controlling biosynthesis of the cyclic lipopeptides putisolvins I and II. J Bacteriol 2006;188:2898–2906.
14. Fekete A, Kuttler C, Rothballer M, Hense BA, Fischer D, Buddrus-Schiemann K, Lucio M, Mueller J, Schmitt-Kopplinnobreak P, Hartmann A. Dynamic regulation of N-acylhomoserine lactone production and degradation in Pseudomonas putida IsoF. FEMS Microbiol Ecol 2010;72:22–34.
15. Fuqua C, Parsek MR, Greenberg EP. Regulation of gene expression by cell-to-cell communication: acyl–homoserine lactone quorum sensing. Annu Rev Genet 2001;35:439–468.
16. Hentzer M, Riedel K, Rasmussen TB, Heydorn A, Andersen JB, ParsekMR, Rice SA, Eberl L, et al. Inhibition of quorum sensing in Pseudomonas aeruginosa biofilm bacteria by a halogenated furanone compound. Microbiology 2002;148:87–102.
17. Hoang TT, Karkhoff-Schweizer RR, Kutchma AJ, Schweizer HP. A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants. Gene 1998;212:77–86.
18. Höfte M, Buysens S, Koedam N, Cornelis P. Zinc affects siderophore-mediated high-affinity iron uptake systems in the rhizosphere Pseudomonas aeruginosa 7NSK2. Biometals 1993;6:252–252.
19. Jain DK, Collinsthompson DL, Lee H, Trevors JT. A dropcollapsing test for screening surfactant-producing microorganisms. J Microbiol Methods 1991;13:271–279.
20. Khan SR, Herman J, Krank J, Serkova NJ, Churchill MEA, Suga H, Farrand SK. N-(3-hydroxyhexanoyl)-L-homoserine lactone is the biologically relevant quormone that regulates the phz operon of Pseudomonas chlororaphis strain 30-84. Appl Environ Microbiol 2007;73:7443–7455.
21. Khan SR, Mavrodi DV, Jog GJ, Suga H, Thomashow LS, Farrand SK. Activation of the phz operon of Pseudomonas fluorescens 2-79 requires the LuxR homolog PhzR, N-(3-OH-hexanoyl)-L-homoserine lactone produced by the LuxI homolog PhzI, and a cis-acting phz box. J Bacteriol 2005;187:6517–6527.
22. King EO, Ward MK, Raney DE. Two simple media for the demonstration of pyocyanin and fluorescein. J Lab Clin Med 1954;44:301–307.
23. King JD, Vinogradov E, Tran V, Lam JS. Biosynthesis of uronamide sugars in Pseudomonas aeruginosa O6 and Escherichia coli O121O antigens. Environ Microbiol 2010;12:1531–1544.
24. Li XJ, Fekete A, Englmann M, Gotz C, Rothballer M, Frommberger M, Buddrus K, Fekete J, et al. Development and application of a method for the analysis of N-acylhomoserine lactones by solidphase extraction and ultra high pressure liquid chromatography. J Chromatogr A 2006;1134:186–193.
25. Massiere F, Badet-Denisot MA. The mechanism of glutaminedependent amidotransferases. Cell Mol Life Sci 1998;54:205–222.
26. Matthijs S, Baysse C, Koedam N, Tehrani KA, Verheyden L, Budzikiewicz H, Schafer M, Hoorelbeke B, et al. The Pseudomonas siderophore quinolobactin is synthesized from xanthurenic acid, an intermediate of the kynurenine pathway. Mol Microbiol 2004;52:371–384.
27. Mavrodi DV, Blankenfeldt W, Thomashow LS. Phenazine compounds in fluorescent Pseudomonas spp. biosynthesis and regulation. Annu Rev Phytopathol 2006;44:417–445.
28. Mavrodi DV, Ksenzenko VN, Bonsall RF, Cook RJ, Boronin AM, Thomashow LS. A seven-gene locus for synthesis is of phenazine-1-carboxylic acid by Pseudomonas fluorescens 2-79. J Bacteriol 1998;180:2541–2548.
29. McClean KH, Winson MK, Fish L, Taylor A, Chhabra SR, Camara M, Daykin M, Lamb JH, et al. Quorum sensing and Chromobacterium violaceum: exploitation of violacein production and inhibition for the detection of N-acylhomoserine lactones. Microbiology 1997;143:3703–3711.
30. Nerey Y, Pannecoucque J, Hernandez HP, Diaz M, Espinosa R, De Vos S, Van Beneden S, Herrera L, Höfte M. Rhizoctonia spp. causing root and hypocotyl rot in Phaseolus vulgaris in Cuba. J Phytopathol 2010;158:236–243.
31. Ninfa AJ, Atkinson MR. PII signal transduction proteins. Trends Microbiol 2000;8:172–179.
32. Pearson JP, Gray KM, Passador L, Tucker KD, Eberhard A, Iglewski BH, Greenberg EP. Structure of the autoinducer required for expression of Pseudomonas aeruginosa virulence genes. Proc Nat Acad Sci USA 1994;91:197–201.
33. Perneel M, Heyrman J, Adiobo A, De Maeyer K, Raaijmakers JM, De Vos P, Höfte M. Characterization of CMR5c and CMR12a, novel fluorescent Pseudomonas strains from the cocoyam rhizosphere with biocontrol activity. J Appl Microbiol 2007;103:1007–1020.
34. Perneel M, Tambong JT, Adiobo A, Floren C, Saborio F, Levesque A, Höfte M. Intraspecific variability of Pythium myriotylum isolated from cocoyam and other host crops. Mycol Res 2006;110:583–593.
35. Pesci EC, Pearson JP, Seed PC, Iglewski BH. Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa. J Bacteriol 1997;179:3127–3132.
36. Pierson LS, Pierson EA. Metabolism and function of phenazines in bacteria: impacts on the behavior of bacteria in the environment and biotechnological processes. Appl Microbiol Biotechnol 2010;86:1659–1670.
37. Pierson LS, Wood DW, Pierson EA. Homoserine lactone-mediated gene regulation in plant-associated bacteria. Annu Rev Phytopathol 1998;36:207–225.
38. Piper KR, Vonbodman SB, Farrand SK. Conjugation factor of Agrobacterium tumefaciens regulates Ti-plasmid transfer by autoinduction. Nature 1993;362:448–450.
39. Price-Whelan A, Dietrich LE, Newman DK. Rethinking ’secondary’ metabolism: physiological roles for phenazine antibiotics. Nat Chem Biol 2006;2:71–78.
40. Price-Whelan A, Dietrich LEP, Newman DK. Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14. J Bacteriol 2007;189: 6372–6381.
41. Raaijmakers JM, de Bruijn I, de Kock MJD. Cyclic lipopeptide production by plant-associated Pseudomonas spp.: diversity, activity, biosynthesis, and regulation. Mol Plant-Microbe Interact 2006;19:699–710.
42. Raaijmakers JM, de Bruijn I, Nybroe O, Ongena M. Natural functions of lipopeptides from Bacillus and Pseudomonas: more than surfactants and antibiotics. FEMS Microbiol Rev 2010;34: 1037–1062.
43. Reitzer L, Schneider BL. Metabolic context and possible physiological themes of sigma54 dependent genes in Escherichia coli. Microbiol Mol Biol Rev 2001;65:422–444.
44. Sambrook J, Fritsch EF, Maniatis T. Molecular Cloning: A Laboratory Manual. 2nd ed. Cold Spring Harbor, New York, United States of America: Cold Spring Harbor Laboratory Press; 1989.
45. Shanks RMQ, Caiazza NC, Hinsa SM, Toutain CM, O’Toole GA. Saccharomyces cerevisiae-based molecular tool kit for manipulation of genes from gram-negative bacteria. Appl Environ Microbiol 2006;72:5027–5036.
46. Shaw PD, Ping G, Daly SL, Cha C, Cronan JE, Rinehart KL, Farrand SK. Detecting and characterizing N-acyl-homoserine lactone signal molecules by thin-layer chromatography. Proc Nat Acad Sci USA 1997;94:6036–6041.
47. Steindler L, Bertani I, De Sordi L, Bigirimana J, Venturi V. The presence, type and role of N-acyl homoserine lactone quorum sensing in fluorescent Pseudomonas originally isolated from rice rhizospheres are unpredictable. FEMS Microbiol Lett 2008;288: 102–111.
48. Stothard P. The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences. Biotechniques 2000;28:1102–1104.
49. Turnbull GA, Morgan JAW, Whipps JM, Saunders JR. The role of bacterial motility in the survival and spread of Pseudomonas fluorescens in soil and in the attachment and colonisation of wheat roots. FEMS Microbiol Ecol 2001;36:21–31.
50. Validov S, Kamilova F, Qi S, Stephan D, Wang JJ, Makarova N, Lugtenberg B. Selection of bacteria able to control Fusarium oxysporum f. sp radicis-lycopersici in stonewool substrate. J Appl Microbiol 2007;102:461–471.
51. von Rad U, Klein I, Dobrev PI, Kottova J, Zazimalova E, Fekete A, Hartmann A, Schmitt-Kopplin P, Durner J. Response of Arabidopsis thaliana to N-hexanoyl-DL-homoserine-lactone, a bacterial quorum sensing molecule produced in the rhizosphere. Planta 2008;229:73–85.
52. Wang Y, Kern SE, Newman DK. Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer. J Bacteriol 2010;192:365–369.
53. Whiteley M, Greenberg EP. Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes. J Bacteriol 2001;183:5529–5534.
54. Wood DW, Pierson LS. The phzI gene of Pseudomonas aureofaciens 30-84 is responsible for the production of a diffusible signal required for phenazine antibiotic production. Gene 1996;168:49–53.
55. Zhang ZG, Pierson LS. A second quorum-sensing system regulates cell surface properties but not phenazine antibiotic production in Pseudomonas aureofaciens. Appl Environ Microbiol 2001;67:4305–4315.