TCIA: An information resource to enable open science

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

Volumn , Issue , 2013, Pages 1282-1285

  Prior, Fred W ^a   Clark, Ken ^a   Commean, Paul ^a   Freymann, John ^b   Jaffe, Carl ^c   Kirby, Justin ^b   Moore, Stephen ^a   Smith, Kirk ^a   Tarbox, Lawrence ^a   Vendt, Bruce ^a   Marquez, Guillermo ^d  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b SAIC FREDERICK INC   (United States)

^c BOSTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d NATIONAL CANCER INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CANCER IMAGING; CANCER RESEARCH; IMAGE ARCHIVES; IMAGE COLLECTIONS; IMAGE DATASETS; INFORMATION RESOURCE; METADATA REPOSITORIES; SCIENTIFIC PUBLICATIONS;

DISEASES; MEDICAL IMAGING;

RESEARCH;

ACCESS TO INFORMATION; BIOLOGY; CLINICAL TRIAL (TOPIC); COMPUTER PROGRAM; COMPUTER SYSTEM; DEVICES; DIAGNOSTIC IMAGING; FACTUAL DATABASE; HUMAN; LUNG NEOPLASMS; NATIONAL HEALTH ORGANIZATION; NEOPLASMS; PATHOLOGY; PROCEDURES; PUBLICATION; SCIENCE; UNITED STATES;

ACCESS TO INFORMATION; CLINICAL TRIALS AS TOPIC; COMPUTATIONAL BIOLOGY; COMPUTER SYSTEMS; DATABASES, FACTUAL; DIAGNOSTIC IMAGING; HUMANS; LUNG NEOPLASMS; NATIONAL CANCER INSTITUTE (U.S.); NEOPLASMS; PUBLICATIONS; SCIENCE; SOFTWARE; UNITED STATES;

EID: 84886473072     PISSN: 1557170X     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/EMBC.2013.6609742     Document Type: Conference Paper

References (23)

1. A. Szalay and J. Gray, "2020 Computing: Science in an exponential world, " Nature, vol. 440, pp. 413-414, 2006.
2. C. Lynch, "Big data: How do your data grow?, " Nature, vol. 455, pp. 28-29, 2008.
3. D. Howe, M. Costanzo, P. Fey, T. Gojobori, L. Hannick, W. Hide, et al., "Big data: The future of biocuration, " Nature, vol. 455, pp. 47-50, 2008.
4. E. Birney, A. Bateman, M. E. Clamp, and T. J. Hubbard, "Mining the draft human genome, " Nature, vol. 409, pp. 827-828, 2001.
5. T. Hampton, "Cancer Genome Atlas, " JAMA: The Journal of the American Medical Association, vol. 296, pp. 1958-1958, 2006.
6. J. S. Grethe, C. Baru, A. Gupta, M. James, B. Ludaescher, M. E. Martone, et al., "Biomedical informatics research network: building a national collaboratory to hasten the derivation of new understanding and treatment of disease, " Studies in health technology and informatics, vol. 112, pp. 100-110, 2005.
7. D. Van Essen, K. Ugurbil, E. Auerbach, D. Barch, T. Behrens, R. Bucholz, et al., "The human connectome project: a data acquisition perspective, " Neuroimage, 2012.
8. C. C. Jaffe, "Imaging and Genomics: Is There a Synergy?, " Radiology, vol. 264, pp. 329-331, August 2012 2012.
9. M. Woelfle, P. Olliaro, and M. H. Todd, "Open science is a research accelerator, " Nat Chem, vol. 3, pp. 745-748, 2011.
10. J. C. Molloy, "The open knowledge foundation: open data means better science, " PLoS Biology, vol. 9, p. e1001195, 2011.
11. D. A. Clunie, "DICOM structured reporting and cancer clinical trials results, " Cancer informatics, vol. 4, p. 33, 2007.
12. M. F. McNitt-Gray, S. G. Armato III, C. R. Meyer, A. P. Reeves, G. McLennan, R. C. Pais, et al., "The Lung Image Database Consortium (LIDC) data collection process for nodule detection and annotation, " Academic Radiology, vol. 14, p. 1464, 2007.
13. D. S. Channin, P. Mongkolwat, V. Kleper, K. Sepukar, and D. L. Rubin, "The cabig™ annotation and image markup project, " Journal of Digital Imaging, vol. 23, pp. 217-225, 2010.
14. F. Wang, T. Pan, A. Sharma, and J. Saltz, "Managing and querying image annotation and markup in XML, " in Proceedings of SPIE, 2010, p. 762805.
15. J. Freymann, J. Kirby, J. Perry, D. Clunie, and C. Jaffe, "Image Data Sharing for Biomedical Research - Meeting HIPAA Requirements for De-identification, " Journal of Digital Imaging, pp. 1-11, 2011.
16. L. P. Clarke, B. S. Croft, R. Nordstrom, H. Zhang, G. Kelloff, and J. Tatum, "Quantitative imaging for evaluation of response to cancer therapy, " Translational Oncology, vol. 2, p. 195, 2009.
17. K. Clark, D. Gierada, G. Marquez, S. Moore, D. Maffitt, J. Moulton, et al., "Collecting 48, 00 CT Exams for the Lung Screening Study of the National Lung Screening Trial, " Journal of Digital Imaging, vol. 22, pp. 667-680, Decmeber 2009 2009.
18. D. Aberle, A. Adams, C. Berg, W. Black, J. Clapp, R. Fagerstrom, et al., "Reduced lung-cancer mortality with low-dose computed tomographic screening, " The New England journal of medicine, vol. 365, p. 395, 2011.
19. R. Jain, L. Poisson, J. Narang, D. Gutman, L. Scarpace, S. N. Hwang, et al., "Genomic Mapping and Survival Prediction in Glioblastoma: Molecular Subclassification Strengthened by Hemodynamic Imaging Biomarkers, " Radiology, 2012.
20. P. O. Zinn, P. Sathyan, B. Mahajan, J. Bruyere, M. Hegi, S. Majumder, et al., "A Novel Volume-Age-KPS (VAK) Glioblastoma Classification Identifies a Prognostic Cognate microRNA-Gene Signature, " PloS one, vol. 7, p. e41522, 2012.
21. P. O. Zinn, B. Majadan, P. Sathyan, S. K. Singh, S. Majumder, F. A. Jolesz, et al., "Radiogenomic mapping of edema/cellular invasion MRI-phenotypes in glioblastoma multiforme, " PloS one, vol. 6, p. e25451, 2011.
22. NCI. (2013, February 3, 2013). CDAS Cancer Data Access System. Available: https://biometry.nci.nih.gov/cdas/.
23. TCIA. (2013, January 18, 2013). For Researchers; Related Publications. Available: http://cancerimagingarchive.net/publications.html.