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Volumn 6, Issue 1, 2013, Pages 1-10

Introns targeted by plant microRNAs: A possible novel mechanism of gene regulation

Author keywords

DCL (Dicer like); Degradome; Intron; Phased small RNA; Plant microRNA; Pre mRNA (the precursor of messenger RNA); RDR (RNA dependent RNA polymerase)

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; ORYZA SATIVA;

EID: 84885954081     PISSN: 19398425     EISSN: 19398433     Source Type: Journal    
DOI: 10.1186/1939-8433-6-1     Document Type: Article
Times cited : (10)

References (23)
  • 1
    • 43449091567 scopus 로고    scopus 로고
    • Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome
    • Addo-Quaye C, Eshoo TW, Bartel DP, Axtell MJ: Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome. Curr Biol 2008, 18: 758-762.
    • (2008) Curr Biol , vol.18 , pp. 758-762
    • Addo-Quaye, C.1    Eshoo, T.W.2    Bartel, D.P.3    Axtell, M.J.4
  • 2
    • 17444430392 scopus 로고    scopus 로고
    • microRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • Allen E, Xie Z, Gustafson AM, Carrington JC: microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 2005, 121: 207-221.
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 4
    • 60149088848 scopus 로고    scopus 로고
    • Origins and mechanisms of miRNAs and siRNAs
    • Carthew RW, Sontheimer EJ: Origins and mechanisms of miRNAs and siRNAs. Cell 2009, 136: 642-655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 5
    • 70350227275 scopus 로고    scopus 로고
    • Small RNAs and their roles in plant development
    • Chen X: Small RNAs and their roles in plant development. Annu Rev Cell Dev Biol 2009, 25: 21-44.
    • (2009) Annu Rev Cell Dev Biol , vol.25 , pp. 21-44
    • Chen, X.1
  • 6
    • 79959967431 scopus 로고    scopus 로고
    • psRNATarget: a plant small RNA target analysis server
    • Dai X, Zhao PX: psRNATarget: a plant small RNA target analysis server. Nucleic Acids Res 2011, 39: W155-W159.
    • (2011) Nucleic Acids Res , vol.39
    • Dai, X.1    Zhao, P.X.2
  • 8
    • 63849207321 scopus 로고    scopus 로고
    • Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome
    • German MA, Luo S, Schroth G, Meyers BC, Green PJ: Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome. Nat Protoc 2009, 4: 356-362.
    • (2009) Nat Protoc , vol.4 , pp. 356-362
    • German, M.A.1    Luo, S.2    Schroth, G.3    Meyers, B.C.4    Green, P.J.5
  • 10
    • 0035180589 scopus 로고    scopus 로고
    • The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant
    • Huala E, Dickerman AW, Garcia-Hernandez M, Weems D, Reiser L, LaFond F, Hanley D, Kiphart D, Zhuang M, Huang W: The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucleic Acids Res 2001, 29: 102-105.
    • (2001) Nucleic Acids Res , vol.29 , pp. 102-105
    • Huala, E.1    Dickerman, A.W.2    Garcia-Hernandez, M.3    Weems, D.4    Reiser, L.5    LaFond, F.6    Hanley, D.7    Kiphart, D.8    Zhuang, M.9    Huang, W.10
  • 15
    • 79960024314 scopus 로고    scopus 로고
    • Toward microRNA-mediated gene regulatory networks in plants
    • Meng Y, Shao C, Chen M: Toward microRNA-mediated gene regulatory networks in plants. Brief Bioinform 2011, 12: 645-659.
    • (2011) Brief Bioinform , vol.12 , pp. 645-659
    • Meng, Y.1    Shao, C.2    Chen, M.3
  • 16
    • 33644876658 scopus 로고    scopus 로고
    • Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA
    • Nakano M, Nobuta K, Vemaraju K, Tej SS, Skogen JW, Meyers BC: Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA. Nucleic Acids Res 2006, 34: D731-D735.
    • (2006) Nucleic Acids Res , vol.34
    • Nakano, M.1    Nobuta, K.2    Vemaraju, K.3    Tej, S.S.4    Skogen, J.W.5    Meyers, B.C.6
  • 17
    • 77953489252 scopus 로고    scopus 로고
    • Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis
    • Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J: Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis. Plant J 2010, 62: 960-976.
    • (2010) Plant J , vol.62 , pp. 960-976
    • Pantaleo, V.1    Szittya, G.2    Moxon, S.3    Miozzi, L.4    Moulton, V.5    Dalmay, T.6    Burgyan, J.7
  • 18
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet O: Origin, biogenesis, and activity of plant microRNAs. Cell 2009, 136: 669-687.
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 19
    • 22144433672 scopus 로고    scopus 로고
    • A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes
    • Williams L, Carles CC, Osmont KS, Fletcher JC: A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes. Proc Natl Acad Sci USA 2005, 102: 9703-9708.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 9703-9708
    • Williams, L.1    Carles, C.C.2    Osmont, K.S.3    Fletcher, J.C.4
  • 23
    • 23144458275 scopus 로고    scopus 로고
    • miRU: an automated plant miRNA target prediction server
    • Zhang Y: miRU: an automated plant miRNA target prediction server. Nucleic Acids Res 2005, 33: W701-W704.
    • (2005) Nucleic Acids Res , vol.33
    • Zhang, Y.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.