메뉴 건너뛰기




Volumn 24, Issue 9-10, 2013, Pages 409-415

Extent of linkage disequilibrium in large-breed dogs: Chromosomal and breed variation

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOSOME; BREEDING; CHROMOSOME SIZE; CHROMOSOME VARIANT; CONTROLLED STUDY; CORRELATION COEFFICIENT; DOG; FEMALE; GENE LINKAGE DISEQUILIBRIUM; GENETIC DIFFERENCE; GENETIC MARKER; GENOTYPE; MALE; NONHUMAN; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84885952893     PISSN: 09388990     EISSN: 14321777     Source Type: Journal    
DOI: 10.1007/s00335-013-9474-y     Document Type: Article
Times cited : (10)

References (22)
  • 1
    • 84872131641 scopus 로고    scopus 로고
    • Extent of linkage disequilibrium in the domestic cat, Felis silvestris catus, and its breeds
    • 23308248 10.1371/journal.pone.0053537 1:CAS:528:DC%2BC3sXhtFamu7s%3D
    • Alhaddad H, Khan R, Grahn RA, et al. (2013) Extent of linkage disequilibrium in the domestic cat, Felis silvestris catus, and its breeds. PLoS One 8:e53537
    • (2013) PLoS One , vol.8 , pp. 53537
    • Alhaddad, H.1    Khan, R.2    Grahn, R.A.3
  • 2
    • 71549158521 scopus 로고    scopus 로고
    • Inherited defects in pedigreed dogs part 1: Disorders related to breed standards
    • 19836981 10.1016/j.tvjl.2009.08.033
    • Asher L, Diesel G, Summers JF, et al. (2009) Inherited defects in pedigreed dogs part 1: disorders related to breed standards. Vet J 182:402-411
    • (2009) Vet J , vol.182 , pp. 402-411
    • Asher, L.1    Diesel, G.2    Summers, J.F.3
  • 3
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barret JC, Fry B, Maller J, et al. (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21:253-265
    • (2005) Bioinformatics , vol.21 , pp. 253-265
    • Barret, J.C.1    Fry, B.2    Maller, J.3
  • 4
    • 33749394003 scopus 로고    scopus 로고
    • Allele frequency matching between SNPs reveals an excess of linkage disequilibrium in genic regions of the human genome
    • 16965180 10.1371/journal.pgen.0020142
    • Eberle MA, Rieder MJ, Kruglyak L, et al. (2006) Allele frequency matching between SNPs reveals an excess of linkage disequilibrium in genic regions of the human genome. PLoS Genet 2:e142
    • (2006) PLoS Genet , vol.2 , pp. 142
    • Eberle, M.A.1    Rieder, M.J.2    Kruglyak, L.3
  • 5
    • 84865595055 scopus 로고    scopus 로고
    • Linkage disequilibrium and inbreeding estimation in Spanish Churra sheep
    • 22691044 10.1186/1471-2156-13-43 1:CAS:528:DC%2BC38XhslWjt7%2FJ
    • Garcia-Gamez E, Goutam S, Gutierrez-Gill B, et al. (2012) Linkage disequilibrium and inbreeding estimation in Spanish Churra sheep. BMC Genet 13:43
    • (2012) BMC Genet , vol.13 , pp. 43
    • Garcia-Gamez, E.1    Goutam, S.2    Gutierrez-Gill, B.3
  • 6
    • 67650312010 scopus 로고    scopus 로고
    • Linkage disequilibrium and demographic history of wild and domestic canids
    • 19189949 10.1534/genetics.108.098830 1:CAS:528:DC%2BD1MXlsFWqur4%3D
    • Gray MM, Granka JM, Bustamante CD, et al. (2009) Linkage disequilibrium and demographic history of wild and domestic canids. Genetics 181:1493-1505
    • (2009) Genetics , vol.181 , pp. 1493-1505
    • Gray, M.M.1    Granka, J.M.2    Bustamante, C.D.3
  • 7
    • 13144306071 scopus 로고    scopus 로고
    • Genome-wide association studies for common diseases and complex traits
    • 15716906 10.1038/nrg1521 1:CAS:528:DC%2BD2MXhtFyjsr8%3D
    • Hirschhorn JN, Daly MJ (2005) Genome-wide association studies for common diseases and complex traits. Nat Rev Genet 6:95-108
    • (2005) Nat Rev Genet , vol.6 , pp. 95-108
    • Hirschhorn, J.N.1    Daly, M.J.2
  • 8
    • 79952595183 scopus 로고    scopus 로고
    • Assessment of the functionality of genome-wide canine SNP arrays and implications for canine disease association studies
    • 10.1111/j.1365-2052.2010.02132.x
    • Ke X, Kennedy LJ, Short AD, et al. (2010) Assessment of the functionality of genome-wide canine SNP arrays and implications for canine disease association studies. Anim Genet 42:181-190
    • (2010) Anim Genet , vol.42 , pp. 181-190
    • Ke, X.1    Kennedy, L.J.2    Short, A.D.3
  • 9
    • 43849094455 scopus 로고    scopus 로고
    • Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel
    • 18435834 10.1186/1471-2164-9-187
    • Khatkar MS, Nicholas FW, Collins AR, et al. (2008) Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel. BMC Genomics 9:187
    • (2008) BMC Genomics , vol.9 , pp. 187
    • Khatkar, M.S.1    Nicholas, F.W.2    Collins, A.R.3
  • 10
    • 84876043849 scopus 로고    scopus 로고
    • Linkage disequilibrium in Angus, Charolais, and Crossbred beef cattle
    • 22912646 10.3389/fgene.2012.00152
    • Lu D, Sargolzaei M, Kelly M, et al. (2012) Linkage disequilibrium in Angus, Charolais, and Crossbred beef cattle. Front Genet 3:152
    • (2012) Front Genet , vol.3 , pp. 152
    • Lu, D.1    Sargolzaei, M.2    Kelly, M.3
  • 11
    • 42349112088 scopus 로고    scopus 로고
    • Genome-wide association studies for complex traits: Consensus, uncertainty and challenges
    • McCarthy MI, Abecasis GR, Cardon LR, et al. (2008) Genome-wide association studies for complex traits: consensus, uncertainty and challenges. Nat Rev Genet 9:356-369
    • (2008) Nat Rev Genet , vol.9 , pp. 356-369
    • McCarthy, M.I.1    Abecasis, G.R.2    Cardon, L.R.3
  • 12
    • 0034096255 scopus 로고    scopus 로고
    • Nine polymorphisms within the head and hinge region of the feline cardiac beta-myosin heavy chain gene
    • Meurs KM, Kittleson M, Spangler E, et al. (2000) Nine polymorphisms within the head and hinge region of the feline cardiac beta-myosin heavy chain gene. Anim Genet 31:231
    • (2000) Anim Genet , vol.31 , pp. 231
    • Meurs, K.M.1    Kittleson, M.2    Spangler, E.3
  • 13
    • 77956278343 scopus 로고    scopus 로고
    • Introduction to linkage disequilibrium, the HapMap and imputation
    • 20194478 10.1101/pdb.top74
    • Neale BM (2010) Introduction to linkage disequilibrium, the HapMap and imputation. Cold Spring Harb Protoc 2010(3):pdb.top74
    • (2010) Cold Spring Harb Protoc , vol.2010 , Issue.3 , pp. 74
    • Neale, B.M.1
  • 14
    • 84857362679 scopus 로고    scopus 로고
    • Genomic analyses of modern dog breeds
    • 22231497 10.1007/s00335-011-9387-6
    • Parker HG (2012) Genomic analyses of modern dog breeds. Mamm Genome 23:19-27
    • (2012) Mamm Genome , vol.23 , pp. 19-27
    • Parker, H.G.1
  • 15
    • 0034977045 scopus 로고    scopus 로고
    • Linkage disequilibrium in humans: Models and data
    • 11410837 10.1086/321275 1:CAS:528:DC%2BD3MXls1emtro%3D
    • Pritchard JK, Przeworski M (2001) Linkage disequilibrium in humans: models and data. Am J Hum Genet 69:1-14
    • (2001) Am J Hum Genet , vol.69 , pp. 1-14
    • Pritchard, J.K.1    Przeworski, M.2
  • 16
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A toolset for whole-genome association and population-based linkage analysis
    • 17701901 10.1086/519795 1:CAS:528:DC%2BD2sXhtVSqurrL
    • Purcell S, Neale B, Todd-Brown K, et al. (2007) PLINK: a toolset for whole-genome association and population-based linkage analysis. Am J Hum Genet 81:559-575
    • (2007) Am J Hum Genet , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3
  • 17
    • 77954580306 scopus 로고    scopus 로고
    • The pattern of linkage disequilibrium in German Holstein cattle
    • 20055813 1:CAS:528:DC%2BC3cXhtVOntLvO
    • Qanbari S, Pimentel ECG, Tetens J, et al. (2010) The pattern of linkage disequilibrium in German Holstein cattle. Anim Genet 41:346-356
    • (2010) Anim Genet , vol.41 , pp. 346-356
    • Qanbari, S.1    Pimentel, E.C.G.2    Tetens, J.3
  • 18
    • 44349105228 scopus 로고    scopus 로고
    • Canine population structure: Assessment and impact of intra-breed stratification on SNP-based association studies
    • 10.1371/journal.pone.0001324 18091995 10.1371/journal.pone.0001324
    • Quignon P, Herbin L, Cadieu E, et al. (2007) Canine population structure: assessment and impact of intra-breed stratification on SNP-based association studies. PLoS One 2:e1324. doi: 10.1371/journal.pone.0001324
    • (2007) PLoS One , vol.2 , pp. 1324
    • Quignon, P.1    Herbin, L.2    Cadieu, E.3
  • 19
    • 84867127555 scopus 로고    scopus 로고
    • So many doggone traits: Mapping genetics of multiple phenotypes in the domestic dog
    • 22878052 10.1093/hmg/dds323 1:CAS:528:DC%2BC38XhsVarsbbM
    • Rimbault M, Ostrander EA (2012) So many doggone traits: mapping genetics of multiple phenotypes in the domestic dog. Hum Mol Genet 21:R52-R57
    • (2012) Hum Mol Genet , vol.21
    • Rimbault, M.1    Ostrander, E.A.2
  • 20
    • 0030777970 scopus 로고    scopus 로고
    • Evidence for individual and between-family variability of the recombination rate in cattle
    • Simianer H, Szyda J, Ramon G, et al. (1997) Evidence for individual and between-family variability of the recombination rate in cattle. Mamm Genome 8:830-835
    • (1997) Mamm Genome , vol.8 , pp. 830-835
    • Simianer, H.1    Szyda, J.2    Ramon, G.3
  • 21
    • 72249088607 scopus 로고    scopus 로고
    • Inherited defects in pedigree dogs part 2: Disorders that are not related to breed standards
    • 19963415 10.1016/j.tvjl.2009.11.002
    • Summers JF, Diesel G, Asher L, et al. (2010) Inherited defects in pedigree dogs part 2: disorders that are not related to breed standards. Vet J 183:39-45
    • (2010) Vet J , vol.183 , pp. 39-45
    • Summers, J.F.1    Diesel, G.2    Asher, L.3
  • 22
    • 10944237840 scopus 로고    scopus 로고
    • Extensive and breed-specific linkage disequilibrium in Canis familiaris
    • 15545498 10.1101/gr.3147604 1:CAS:528:DC%2BD2cXhtVyiur%2FN
    • Sutter NB, Eberle MA, Parker HG, et al. (2004) Extensive and breed-specific linkage disequilibrium in Canis familiaris. Genome Res 14:2388-2396
    • (2004) Genome Res , vol.14 , pp. 2388-2396
    • Sutter, N.B.1    Eberle, M.A.2    Parker, H.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.