Quantitative plant resistance in cultivar mixtures: Wheat yellow rust as a modeling case study

New Phytologist

Volumn 200, Issue 3, 2013, Pages 888-897

  Sapoukhina, Natalia ^a,b   Paillard, Sophie ^c   Dedryver, Françoise ^c   de Vallavieille Pope, Claude ^d  

^a Universite d'Angers   (France)

^b UNIVERSITÉ D'ANGERS   (France)

^c Universite Rennes 1   (France)

^d INRA Institut National de la Recherche Agronomique   (France)

Author keywords

Competition; Diversified agroecosystems; Puccinia striiformis; Quantitative partial resistance; Reaction diffusion model; Triticum aestivum; Wheat yellow (stripe) rust

Indexed keywords

CULTIVAR; DISEASE RESISTANCE; DISEASE SEVERITY; HETEROGENEITY; HOST PLANT; PATHOGEN; RUST DISEASE;

PUCCINIA STRIIFORMIS; PUCCINIA STRIIFORMIS F. SP. TRITICI; TRITICUM AESTIVUM;

ARTICLE; BASIDIOMYCETES; COMPETITION; DISEASE RESISTANCE; DIVERSIFIED AGROECOSYSTEMS; GENETICS; MICROBIOLOGY; PLANT DISEASE; PUCCINIA STRIIFORMIS; QUANTITATIVE/PARTIAL RESISTANCE; REACTION-DIFFUSION MODEL; SPECIES DIFFERENCE; TRITICUM AESTIVUM; WHEAT; WHEAT YELLOW (STRIPE) RUST;

COMPETITION; DIVERSIFIED AGROECOSYSTEMS; PUCCINIA STRIIFORMIS; QUANTITATIVE/PARTIAL RESISTANCE; REACTION-DIFFUSION MODEL; TRITICUM AESTIVUM; WHEAT YELLOW (STRIPE) RUST;

BASIDIOMYCOTA; DISEASE RESISTANCE; PLANT DISEASES; SPECIES SPECIFICITY; TRITICUM;

EID: 84885432394     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/nph.12413     Document Type: Article

References (52)

1. Abang MM, Baum M, Ceccarelli S, Grando S, Linde C, Yahyaoui A, Zhan J, McDonald BA. 2006. Differential selection on Rhynchosporium secalis during the parasitic and saprophytic phases in the barley scald disease cycle. Phytopathology 96: 1214-1222.
2. Abbott DC, Burdon JJ, Brown AHD, Read BJ, Bittisnich D. 2000. The incidence of barley scald in cultivar mixtures. Australian Journal of Agricultural Research 51: 355-360.
3. Akanda SI, Mundt CC. 1996. Effects of two-component wheat cultivar mixtures on stripe disease severity. Phytopathology 86: 347-353.
4. Andrivon D, Lucas JM, Ellissèche D. 2003. Development of natural late blight epidemics in pure and mixed plots of potato cultivars with different levels of partial resistance. Plant Pathology 5: 586-594.
5. Aslam M, Fischbeck G. 1993. Development of stripe and leaf rusts in wheat cultivar mixtures. Journal of Agronomy and Crop Science 171: 49-54.
6. van den Bosch F. 1993. Optimal cultivar mixtures in focal plant disease. Netherlands Journal of Plant Pathology 99: 41-50.
7. van den Bosch F, Gilligan CA. 2003. Measures of durability of resistance. Phytopathology 93: 616-625.
8. Bourget R. 2013. Stochastic modeling of pathogen adaptation to hosts carrying genetic resistances. PhD thesis, Angers University, Angers, France.
9. Bourget R, Chaumont L, Sapoukhina N. 2013. Timing of pathogen adaptation to a multicomponent treatment. PLoS One, in press.
10. Chen XM. 2005. Epidemiology and control of stripe rust [Puccinia striiformis f. sp. tritici] on wheat. Canadian Journal Plant Pathology 27: 314-337.
11. Clevers JGPW, Vonder OW, Jongschaap REE, Desprats JF, King C, Prévot L, Bruguier N. 2002. Using SPOT data for calibrating a wheat growth model under mediterranean conditions. Agronomie 22: 687-694.
12. Collingham Y, Huntley B. 2000. Impacts of habitat fragmentation and patch size in migration rates. Ecological Applications 10: 131-144.
13. Cowger C, Mundt CC. 2002. Effects of wheat cultivar mixtures on epidemic progression of Septoria tritici blotch and pathogenicity of Mycosphaerella graminicola. Phytopathology 92: 617-623.
14. Dedryver F, Paillard S, Mallard S, Robert O, Trottet M, Nègre S, Verplancke G, Jahier J. 2009. Characterization of genetic components involved in durable resistance to stripe rust in the bread wheat 'Renan'. Phytopathology 99: 968-973.
15. Dewhirst S, Lutscher F. 2009. Dispersal in heterogeneous habitats: thresholds, spatial scales, and approximate rates of spread. Ecology 90: 1338-1345.
16. Efron B, Tibshirani RJ. 1993. An introduction to the bootstrap. London, UK: Chapman and Hall.
17. Fabre F, Rousseau E, Mailleret L, Moury B. 2012. Durable strategies to deploy plant resistance in agricultural landscapes. New Phytologist 193: 1064-1075.
18. Finckh MR, Gacek ES, Goyeau H, Lannou C, Merz U, Mundt CC, Munk L, Nadziak J, Newton AC, de Vallavieille-Pope C et al. 2000. Cereal variety and species mixtures in practice. Agronomie 20: 813-837.
19. Finckh MR, Mundt CC. 1992. Stripe rust, yield, and plant competition in wheat cultivar mixtures. Phytopathology 82: 905-913.
20. Flor HH. 1956. The complementary genetic systems in flax and flax rust. Advances in Genetics 8: 29-54.
21. Garett KA, Mundt CC. 1999. Epidemiology in mixed host populations. Phytopathology 89: 984-990.
22. Garrett KA, Zuñiga LN, Roncal E, Forbes GA, Mundt CC, Su Z, Nelson RJ. 2009. Intraspecific functional diversity in hosts and its effect on disease risk across a climatic gradient. Ecological Applications 19: 1868-1883.
23. Huang C, Sun Zh, Wang H, Luo Y, Ma Z. 2011. Spatiotemporal effects of cultivar mixtures on wheat stripe rust epidemics. European Journal of Plant Pathology 131: 483-496.
24. Huang C, Sun Zh, Wang H, Luo Y, Ma Z. 2012. Effects of wheat cultivar mixtures on stripe rust: a meta-analysis on field trial. Crop Protection 33: 52-58.
25. Jeger MJ, Griffiths E, Jones DG. 1981a. Disease progress of non-specialised fungal pathogens in intraspecific mixed stands of cereal cultivars. I. Models. Annals of Applied Biology 98: 187-198.
26. Jeger MJ, Griffiths E, Jones DG. 1981b. Disease progress of non-specialised fungal pathogens in intraspecific mixed stands of cereal cultivars. II. Field experiments. Annals of Applied Biology 98: 199-210.
27. Kinezaki N, Kawasaki K, Shigesada N. 2010. The effects of the spatial configuration of habitat fragmentation on invasive spread. Theoretical Population Biology 78: 298-308.
28. Kolmer JA, Chen X, Jin Y. 2009. Diseases which challenge global wheat production - the cereal rusts. In: Carver BF, ed. Wheat: science and trade. Hoboken, NJ, USA: Wiley Press, 89-124.
29. 2. The American Statistician 39: 279-285.
30. Lannou C, Hubert P, Gimeno C. 2005. Competition and interactions among stripe rust pathotypes in wheat-cultivar mixtures. Plant Pathology 54: 699-712.
31. Leonard KJ. 1969. Factors affecting rates of stem rust increase in mixed plantings of susceptible and resistant oat varieties. Phytopathology 59: 1845-1850.
32. Lin LI. 1989. A concordance correlation coefficient to evaluate reproducibility. Biometrics 45: 255-268.
33. Mahmood T, Marshall D, McDaniel ME. 1991. Effect of winter-wheat cultivar mixtures on leaf rust severity and grain-yield. Phytopathology 81: 470-474.
34. Mille B, Belhaj Fraj M, Monod H, de Vallavieille-Pope C. 2006. Assessing four-way mixtures of winter wheat cultivars from the performances of their two-way and individual components. European Journal of Plant Pathology 114: 163-173.
35. Mundt CC. 2002. Use of multiline cultivars and cultivar mixtures for disease management. Annual Review of Phytopathology 40: 381-410.
36. Mundt CC, Brophy LS, Schmitt ME. 1995. Choosing crop cultivars and mixtures under high versus low disease pressure: a case study with wheat. Crop Protection 14: 509-515.
37. Mundt CC, Sackett KE, Wallace LD. 2011. Landscape heterogeneity and disease spread: experimental approaches with a plant pathogen. Ecological Applications 21: 321-328.
38. Newton AC, Ellis RP, Hackett CA, Guy DC. 1997. The effect of component number on Rhynchosporium secalis infection and yield in mixtures of winter barley cultivars. Plant Pathology 46: 930-938.
39. Newton AC, Thomas WTB. 1992. The effect of specific and non-specific resistance in mixtures of barley genotypes on infection by mildew (Erysiphe graminis f.sp. hordei) and on yield. Euphytica 59: 73-81.
40. Otten W, Bailey DJ, Gilligan CA. 2004. Empirical evidence of spatial thresholds to control invasion of fungal parasites and saprotrophs. New Phytologist 163: 125-132.
41. Papaïx J, Goyeau H, Du Cheyron P, Monod H, Lannou C. 2011. Influence of cultivated landscape composition on variety resistance: an assessment based on wheat leaf rust epidemics. New Phytologist 191: 1095-1107.
42. Press WH, Teukolsky SA, Vetterling WT, Flannery BP. 1992. Numerical recipes in C: the art of scientific computing, 2nd edn. London, UK: Cambridge University Press.
43. Singh RP, William HM, Huerta-Espino J, Rosewarne G. 2004. Wheat rust in Asia: meeting the challenges with old and new technologies. In: New directions for a diverse planet, Proceedings 4th Int Crop Science Cong, 26 September - 1 October 2004, Brisbane Australia: 1-13 (URL http://www.cropscience.org.au/icsc2004/symposia/3/7/141_singhrp.htm).
44. Skelsey P, Rossing WAH, Kessel GJT, Powell J, van der Werf W. 2005. Influence of host diversity on development of epidemics: an evaluation and elaboration of mixture theory. Phytopathology 95: 328-338.
45. Sommerhalder RJ, McDonald B, Mascher F, Zhan J. 2011. Effect of hosts on competition among clones and evidence of differential selection between pathogenic and saprophytic phases in experimental populations of the wheat pathogen Phaeosphaeria nodorum. BMC Evolutionary Biology 11: 188.
46. Suzuki SU, Sasaki A. 2011. How does the resistance threshold in spatially explicit epidemic dynamics depend on the basic reproductive ratio and spatial correlation of crop genotypes? Journal of Theoretical Biology 276: 117-125.
47. de Vallavieille-Pope C. 2004. Management of disease resistance diversity of cultivars of a species in single fields: controlling epidemics. Comptes Rendus Biologies 327: 611-620.
48. de Vallavieille-Pope C, Ali S, Leconte M, Enjalbert J, Delos M, Rouzet J. 2012. Virulence dynamics and regional structuring of Puccinia striiformis f. sp. tritici in France between 1984 and 2009. Plant Disease 96: 131-140.
49. de Vallavieille-Pope C, Goyeau H. 1996. Induced resistance in wheat yellow rust epidemics in varietal mixtures. Proceedings of the 9th European and Mediterranean Cereal Rusts & Powdery Mildews Conference, 2-6 September 1996, Lunteren, the Netherlands.
50. Xu X-M, Ridout MS. 2000. Stochastic simulation of the spread of race-specific and race-nonspecific aerial fungal pathogens in cultivar mixtures. Plant Pathology 49: 207-218.
51. Yang XB, Madden LV, Brazee RD. 1991. Application of the diffusion equation for modelling splash dispersal of point-source pathogens. New Phytologist 118: 295-301.
52. Zhan J, Mundt CC, Hoffer ME, McDonald BA. 2002. Local adaptation and effect of host genotype on the rate of pathogen evolution: an experimental test in a plant pathosystem. Journal of Evolutionary Biology 15: 634-647.